Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:B52:B53
Extra
PDB:
ATOM 1 O3' A A 51 23.933 -2.809 -16.195 1.00 65.23 O
ATOM 2 P U A 52 25.296 -2.729 -17.041 1.00 74.98 P
ATOM 3 OP1 U A 52 25.281 -3.858 -18.002 1.00 67.91 O
ATOM 4 OP2 U A 52 26.411 -2.636 -16.066 1.00 64.15 O
ATOM 5 O5' U A 52 25.143 -1.348 -17.821 1.00 62.86 O
ATOM 6 C5' U A 52 24.755 -1.321 -19.188 1.00 64.30 C
ATOM 7 C4' U A 52 23.293 -0.977 -19.343 1.00 57.10 C
ATOM 8 O4' U A 52 23.018 0.304 -18.716 1.00 58.13 O
ATOM 9 C3' U A 52 22.795 -0.797 -20.769 1.00 57.89 C
ATOM 10 O3' U A 52 22.529 -2.023 -21.427 1.00 59.56 O
ATOM 11 C2' U A 52 21.562 0.076 -20.579 1.00 55.72 C
ATOM 12 O2' U A 52 20.467 -0.696 -20.108 1.00 56.07 O
ATOM 13 C1' U A 52 22.025 0.995 -19.449 1.00 55.55 C
ATOM 14 N1 U A 52 22.612 2.252 -19.964 1.00 52.60 N
ATOM 15 C2 U A 52 21.771 3.162 -20.578 1.00 50.63 C
ATOM 16 O2 U A 52 20.573 2.977 -20.716 1.00 47.61 O
ATOM 17 N3 U A 52 22.387 4.303 -21.030 1.00 51.58 N
ATOM 18 C4 U A 52 23.727 4.621 -20.931 1.00 48.40 C
ATOM 19 O4 U A 52 24.134 5.692 -21.388 1.00 46.35 O
ATOM 20 C5 U A 52 24.528 3.628 -20.282 1.00 49.24 C
ATOM 21 C6 U A 52 23.956 2.507 -19.832 1.00 48.96 C
ATOM 22 P G A 53 22.921 -2.205 -22.975 1.00 55.16 P
ATOM 23 OP1 G A 53 22.814 -3.650 -23.288 1.00 58.37 O
ATOM 24 OP2 G A 53 24.225 -1.528 -23.177 1.00 51.77 O
ATOM 25 O5' G A 53 21.772 -1.402 -23.728 1.00 50.59 O
TER
ATOM 1 O3' U B 52 22.529 -2.023 -21.427 1.00 59.56 O
ATOM 2 P G B 53 22.921 -2.205 -22.975 1.00 55.16 P
ATOM 3 OP1 G B 53 22.814 -3.650 -23.288 1.00 58.37 O
ATOM 4 OP2 G B 53 24.225 -1.528 -23.177 1.00 51.77 O
ATOM 5 O5' G B 53 21.772 -1.402 -23.728 1.00 50.59 O
ATOM 6 C5' G B 53 20.417 -1.819 -23.648 1.00 47.57 C
ATOM 7 C4' G B 53 19.497 -0.851 -24.348 1.00 46.73 C
ATOM 8 O4' G B 53 19.649 0.475 -23.776 1.00 49.18 O
ATOM 9 C3' G B 53 19.751 -0.640 -25.833 1.00 46.42 C
ATOM 10 O3' G B 53 19.202 -1.667 -26.642 1.00 44.05 O
ATOM 11 C2' G B 53 19.134 0.728 -26.083 1.00 44.57 C
ATOM 12 O2' G B 53 17.721 0.629 -26.183 1.00 48.90 O
ATOM 13 C1' G B 53 19.472 1.453 -24.780 1.00 46.06 C
ATOM 14 N9 G B 53 20.711 2.246 -24.889 1.00 43.69 N
ATOM 15 C8 G B 53 21.927 2.008 -24.291 1.00 44.77 C
ATOM 16 N7 G B 53 22.822 2.915 -24.582 1.00 44.78 N
ATOM 17 C5 G B 53 22.155 3.805 -25.414 1.00 43.98 C
ATOM 18 C6 G B 53 22.603 4.991 -26.050 1.00 41.87 C
ATOM 19 O6 G B 53 23.721 5.515 -26.007 1.00 41.20 O
ATOM 20 N1 G B 53 21.595 5.582 -26.803 1.00 41.31 N
ATOM 21 C2 G B 53 20.316 5.098 -26.932 1.00 40.78 C
ATOM 22 N2 G B 53 19.483 5.813 -27.706 1.00 39.77 N
ATOM 23 N3 G B 53 19.884 3.993 -26.345 1.00 42.38 N
ATOM 24 C4 G B 53 20.850 3.407 -25.607 1.00 42.76 C
ATOM 25 P U B 54 19.972 -2.152 -27.967 1.00 38.16 P
ATOM 26 OP1 U B 54 19.296 -3.383 -28.440 1.00 47.61 O
ATOM 27 OP2 U B 54 21.414 -2.219 -27.632 1.00 39.85 O
ATOM 28 O5' U B 54 19.709 -0.960 -28.990 1.00 48.70 O
TER
ATOM 2 P U A 52 25.296 -2.729 -17.041 1.00 74.98 P
ATOM 3 OP1 U A 52 25.281 -3.858 -18.002 1.00 67.91 O
ATOM 4 OP2 U A 52 26.411 -2.636 -16.066 1.00 64.15 O
ATOM 5 O5' U A 52 25.143 -1.348 -17.821 1.00 62.86 O
ATOM 6 C5' U A 52 24.755 -1.321 -19.188 1.00 64.30 C
ATOM 7 C4' U A 52 23.293 -0.977 -19.343 1.00 57.10 C
ATOM 8 O4' U A 52 23.018 0.304 -18.716 1.00 58.13 O
ATOM 9 C3' U A 52 22.795 -0.797 -20.769 1.00 57.89 C
ATOM 10 O3' U A 52 22.529 -2.023 -21.427 1.00 59.56 O
ATOM 11 C2' U A 52 21.562 0.076 -20.579 1.00 55.72 C
ATOM 12 O2' U A 52 20.467 -0.696 -20.108 1.00 56.07 O
ATOM 13 C1' U A 52 22.025 0.995 -19.449 1.00 55.55 C
ATOM 14 N1 U A 52 22.612 2.252 -19.964 1.00 52.60 N
ATOM 15 C2 U A 52 21.771 3.162 -20.578 1.00 50.63 C
ATOM 16 O2 U A 52 20.573 2.977 -20.716 1.00 47.61 O
ATOM 17 N3 U A 52 22.387 4.303 -21.030 1.00 51.58 N
ATOM 18 C4 U A 52 23.727 4.621 -20.931 1.00 48.40 C
ATOM 19 O4 U A 52 24.134 5.692 -21.388 1.00 46.35 O
ATOM 20 C5 U A 52 24.528 3.628 -20.282 1.00 49.24 C
ATOM 21 C6 U A 52 23.956 2.507 -19.832 1.00 48.96 C
ATOM 22 P G A 53 22.921 -2.205 -22.975 1.00 55.16 P
ATOM 23 OP1 G A 53 22.814 -3.650 -23.288 1.00 58.37 O
ATOM 24 OP2 G A 53 24.225 -1.528 -23.177 1.00 51.77 O
ATOM 25 O5' G A 53 21.772 -1.402 -23.728 1.00 50.59 O
TER
ATOM 1 O3' U B 52 22.529 -2.023 -21.427 1.00 59.56 O
ATOM 2 P G B 53 22.921 -2.205 -22.975 1.00 55.16 P
ATOM 3 OP1 G B 53 22.814 -3.650 -23.288 1.00 58.37 O
ATOM 4 OP2 G B 53 24.225 -1.528 -23.177 1.00 51.77 O
ATOM 5 O5' G B 53 21.772 -1.402 -23.728 1.00 50.59 O
ATOM 6 C5' G B 53 20.417 -1.819 -23.648 1.00 47.57 C
ATOM 7 C4' G B 53 19.497 -0.851 -24.348 1.00 46.73 C
ATOM 8 O4' G B 53 19.649 0.475 -23.776 1.00 49.18 O
ATOM 9 C3' G B 53 19.751 -0.640 -25.833 1.00 46.42 C
ATOM 10 O3' G B 53 19.202 -1.667 -26.642 1.00 44.05 O
ATOM 11 C2' G B 53 19.134 0.728 -26.083 1.00 44.57 C
ATOM 12 O2' G B 53 17.721 0.629 -26.183 1.00 48.90 O
ATOM 13 C1' G B 53 19.472 1.453 -24.780 1.00 46.06 C
ATOM 14 N9 G B 53 20.711 2.246 -24.889 1.00 43.69 N
ATOM 15 C8 G B 53 21.927 2.008 -24.291 1.00 44.77 C
ATOM 16 N7 G B 53 22.822 2.915 -24.582 1.00 44.78 N
ATOM 17 C5 G B 53 22.155 3.805 -25.414 1.00 43.98 C
ATOM 18 C6 G B 53 22.603 4.991 -26.050 1.00 41.87 C
ATOM 19 O6 G B 53 23.721 5.515 -26.007 1.00 41.20 O
ATOM 20 N1 G B 53 21.595 5.582 -26.803 1.00 41.31 N
ATOM 21 C2 G B 53 20.316 5.098 -26.932 1.00 40.78 C
ATOM 22 N2 G B 53 19.483 5.813 -27.706 1.00 39.77 N
ATOM 23 N3 G B 53 19.884 3.993 -26.345 1.00 42.38 N
ATOM 24 C4 G B 53 20.850 3.407 -25.607 1.00 42.76 C
ATOM 25 P U B 54 19.972 -2.152 -27.967 1.00 38.16 P
ATOM 26 OP1 U B 54 19.296 -3.383 -28.440 1.00 47.61 O
ATOM 27 OP2 U B 54 21.414 -2.219 -27.632 1.00 39.85 O
ATOM 28 O5' U B 54 19.709 -0.960 -28.990 1.00 48.70 O
TER
Atoms:
C4: (23.727,4.621,-20.931)
N3: (22.387,4.303,-21.030)
OP1: (25.281,-3.858,-18.002)
OP2: (26.411,-2.636,-16.066)
C2: (21.771,3.162,-20.578)
C1': (22.025,0.995,-19.449)
C3': (22.795,-0.797,-20.769)
O5': (25.143,-1.348,-17.821)
O4': (23.018,0.304,-18.716)
C5': (24.755,-1.321,-19.188)
P: (25.296,-2.729,-17.041)
C4': (23.293,-0.977,-19.343)
C2': (21.562,0.076,-20.579)
O2': (20.467,-0.696,-20.108)
N1: (22.612,2.252,-19.964)
O4: (24.134,5.692,-21.388)
O2: (20.573,2.977,-20.716)
C6: (23.956,2.507,-19.832)
C5: (24.528,3.628,-20.282)
O3': (22.529,-2.023,-21.427)
N3: (22.387,4.303,-21.030)
OP1: (25.281,-3.858,-18.002)
OP2: (26.411,-2.636,-16.066)
C2: (21.771,3.162,-20.578)
C1': (22.025,0.995,-19.449)
C3': (22.795,-0.797,-20.769)
O5': (25.143,-1.348,-17.821)
O4': (23.018,0.304,-18.716)
C5': (24.755,-1.321,-19.188)
P: (25.296,-2.729,-17.041)
C4': (23.293,-0.977,-19.343)
C2': (21.562,0.076,-20.579)
O2': (20.467,-0.696,-20.108)
N1: (22.612,2.252,-19.964)
O4: (24.134,5.692,-21.388)
O2: (20.573,2.977,-20.716)
C6: (23.956,2.507,-19.832)
C5: (24.528,3.628,-20.282)
O3': (22.529,-2.023,-21.427)
OP1: (22.814,-3.650,-23.288)
OP2: (24.225,-1.528,-23.177)
C3': (19.751,-0.640,-25.833)
C1': (19.472,1.453,-24.780)
C5': (20.417,-1.819,-23.648)
O6: (23.721,5.515,-26.007)
O4': (19.649,0.475,-23.776)
C8: (21.927,2.008,-24.291)
C2: (20.316,5.098,-26.932)
C6: (22.603,4.991,-26.050)
C5: (22.155,3.805,-25.414)
C4: (20.850,3.407,-25.607)
P: (22.921,-2.205,-22.975)
C4': (19.497,-0.851,-24.348)
C2': (19.134,0.728,-26.083)
O2': (17.721,0.629,-26.183)
N1: (21.595,5.582,-26.803)
N2: (19.483,5.813,-27.706)
N3: (19.884,3.993,-26.345)
N7: (22.822,2.915,-24.582)
N9: (20.711,2.246,-24.889)
O5': (21.772,-1.402,-23.728)
O3': (19.202,-1.667,-26.642)
OP2: (24.225,-1.528,-23.177)
C3': (19.751,-0.640,-25.833)
C1': (19.472,1.453,-24.780)
C5': (20.417,-1.819,-23.648)
O6: (23.721,5.515,-26.007)
O4': (19.649,0.475,-23.776)
C8: (21.927,2.008,-24.291)
C2: (20.316,5.098,-26.932)
C6: (22.603,4.991,-26.050)
C5: (22.155,3.805,-25.414)
C4: (20.850,3.407,-25.607)
P: (22.921,-2.205,-22.975)
C4': (19.497,-0.851,-24.348)
C2': (19.134,0.728,-26.083)
O2': (17.721,0.629,-26.183)
N1: (21.595,5.582,-26.803)
N2: (19.483,5.813,-27.706)
N3: (19.884,3.993,-26.345)
N7: (22.822,2.915,-24.582)
N9: (20.711,2.246,-24.889)
O5': (21.772,-1.402,-23.728)
O3': (19.202,-1.667,-26.642)
Image (generated by PyMOL):