ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1F7Y:B19:B20

Extra

PDB:
ATOM 1 O3' A A 18 -2.903 48.445 23.452 1.00 52.08 O
ATOM 2 P C A 19 -1.951 49.734 23.338 1.00 47.98 P
ATOM 3 OP1 C A 19 -1.027 49.722 24.500 1.00 48.79 O
ATOM 4 OP2 C A 19 -2.817 50.914 23.089 1.00 39.05 O
ATOM 5 O5' C A 19 -1.076 49.458 22.043 1.00 33.53 O
ATOM 6 C5' C A 19 -0.129 48.390 22.059 1.00 31.65 C
ATOM 7 C4' C A 19 0.292 48.029 20.662 1.00 33.44 C
ATOM 8 O4' C A 19 -0.864 47.672 19.852 1.00 42.87 O
ATOM 9 C3' C A 19 0.937 49.133 19.858 1.00 36.54 C
ATOM 10 O3' C A 19 2.277 49.326 20.261 1.00 49.58 O
ATOM 11 C2' C A 19 0.824 48.556 18.457 1.00 38.68 C
ATOM 12 O2' C A 19 1.725 47.486 18.285 1.00 35.83 O
ATOM 13 C1' C A 19 -0.600 47.992 18.495 1.00 32.42 C
ATOM 14 N1 C A 19 -1.546 49.026 18.076 1.00 28.66 N
ATOM 15 C2 C A 19 -1.574 49.392 16.739 1.00 34.44 C
ATOM 16 O2 C A 19 -0.837 48.793 15.945 1.00 34.74 O
ATOM 17 N3 C A 19 -2.401 50.387 16.343 1.00 24.21 N
ATOM 18 C4 C A 19 -3.185 50.995 17.236 1.00 24.83 C
ATOM 19 N4 C A 19 -3.990 51.967 16.805 1.00 44.74 N
ATOM 20 C5 C A 19 -3.185 50.632 18.604 1.00 19.23 C
ATOM 21 C6 C A 19 -2.362 49.645 18.979 1.00 34.97 C
ATOM 22 P G A 20 2.916 50.795 20.214 1.00 49.02 P
ATOM 23 OP1 G A 20 4.211 50.730 20.935 1.00 50.91 O
ATOM 24 OP2 G A 20 1.885 51.770 20.650 1.00 49.45 O
ATOM 25 O5' G A 20 3.206 51.017 18.665 1.00 32.51 O
TER

ATOM 1 O3' C B 19 2.277 49.326 20.261 1.00 49.58 O
ATOM 2 P G B 20 2.916 50.795 20.214 1.00 49.02 P
ATOM 3 OP1 G B 20 4.211 50.730 20.935 1.00 50.91 O
ATOM 4 OP2 G B 20 1.885 51.770 20.650 1.00 49.45 O
ATOM 5 O5' G B 20 3.206 51.017 18.665 1.00 32.51 O
ATOM 6 C5' G B 20 4.132 50.173 17.980 1.00 34.03 C
ATOM 7 C4' G B 20 3.957 50.290 16.477 1.00 45.87 C
ATOM 8 O4' G B 20 2.586 49.964 16.101 1.00 44.41 O
ATOM 9 C3' G B 20 4.167 51.661 15.863 1.00 33.61 C
ATOM 10 O3' G B 20 5.546 51.991 15.720 1.00 46.54 O
ATOM 11 C2' G B 20 3.459 51.499 14.522 1.00 34.96 C
ATOM 12 O2' G B 20 4.180 50.760 13.569 1.00 26.87 O
ATOM 13 C1' G B 20 2.234 50.683 14.928 1.00 32.40 C
ATOM 14 N9 G B 20 1.135 51.587 15.240 1.00 26.47 N
ATOM 15 C8 G B 20 0.557 51.818 16.462 1.00 35.69 C
ATOM 16 N7 G B 20 -0.352 52.757 16.427 1.00 36.65 N
ATOM 17 C5 G B 20 -0.382 53.154 15.098 1.00 31.10 C
ATOM 18 C6 G B 20 -1.149 54.159 14.457 1.00 32.50 C
ATOM 19 O6 G B 20 -1.987 54.917 14.950 1.00 44.42 O
ATOM 20 N1 G B 20 -0.858 54.238 13.101 1.00 29.39 N
ATOM 21 C2 G B 20 0.047 53.440 12.443 1.00 36.20 C
ATOM 22 N2 G B 20 0.184 53.657 11.126 1.00 41.86 N
ATOM 23 N3 G B 20 0.766 52.497 13.030 1.00 30.10 N
ATOM 24 C4 G B 20 0.509 52.419 14.349 1.00 29.48 C
ATOM 25 P G B 21 6.018 53.527 15.838 1.00 45.08 P
ATOM 26 OP1 G B 21 7.492 53.593 15.677 1.00 47.05 O
ATOM 27 OP2 G B 21 5.390 54.091 17.045 1.00 32.05 O
ATOM 28 O5' G B 21 5.389 54.206 14.549 1.00 42.85 O
TER

Atoms:
C2: (-1.574,49.392,16.739)
OP1: (-1.027,49.722,24.500)
OP2: (-2.817,50.914,23.089)
C4: (-3.185,50.995,17.236)
O5': (-1.076,49.458,22.043)
C3': (0.937,49.133,19.858)
C1': (-0.600,47.992,18.495)
O4': (-0.864,47.672,19.852)
C5': (-0.129,48.390,22.059)
P: (-1.951,49.734,23.338)
O2: (-0.837,48.793,15.945)
C4': (0.292,48.029,20.662)
C2': (0.824,48.556,18.457)
O2': (1.725,47.486,18.285)
N1: (-1.546,49.026,18.076)
N3: (-2.401,50.387,16.343)
N4: (-3.990,51.967,16.805)
C6: (-2.362,49.645,18.979)
C5: (-3.185,50.632,18.604)
O3': (2.277,49.326,20.261)
OP1: (4.211,50.730,20.935)
OP2: (1.885,51.770,20.650)
C3': (4.167,51.661,15.863)
C1': (2.234,50.683,14.928)
C5': (4.132,50.173,17.980)
O6: (-1.987,54.917,14.950)
O4': (2.586,49.964,16.101)
C8: (0.557,51.818,16.462)
C2: (0.047,53.440,12.443)
C6: (-1.149,54.159,14.457)
C5: (-0.382,53.154,15.098)
C4: (0.509,52.419,14.349)
P: (2.916,50.795,20.214)
C4': (3.957,50.290,16.477)
C2': (3.459,51.499,14.522)
O2': (4.180,50.760,13.569)
N1: (-0.858,54.238,13.101)
N2: (0.184,53.657,11.126)
N3: (0.766,52.497,13.030)
N7: (-0.352,52.757,16.427)
N9: (1.135,51.587,15.240)
O5': (3.206,51.017,18.665)
O3': (5.546,51.991,15.720)
Image (generated by PyMOL):
PyMOL image
show in jmol