Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y6S:A4:A3
Extra
PDB:
ATOM 1 O3' G A 3 78.485 24.887 19.224 1.00 55.24 O
ATOM 2 P C A 4 77.097 24.348 18.625 1.00 55.37 P
ATOM 3 OP1 C A 4 76.182 25.513 18.491 1.00 56.56 O
ATOM 4 OP2 C A 4 76.675 23.174 19.429 1.00 55.09 O
ATOM 5 O5' C A 4 77.479 23.840 17.165 1.00 52.70 O
ATOM 6 C5' C A 4 77.743 24.774 16.105 1.00 48.59 C
ATOM 7 C4' C A 4 78.082 24.033 14.839 1.00 46.75 C
ATOM 8 O4' C A 4 79.282 23.242 15.054 1.00 45.99 O
ATOM 9 C3' C A 4 77.051 23.007 14.410 1.00 46.34 C
ATOM 10 O3' C A 4 75.974 23.576 13.688 1.00 44.97 O
ATOM 11 C2' C A 4 77.872 22.059 13.550 1.00 46.70 C
ATOM 12 O2' C A 4 78.101 22.561 12.250 1.00 47.89 O
ATOM 13 C1' C A 4 79.187 22.025 14.326 1.00 45.92 C
ATOM 14 N1 C A 4 79.242 20.906 15.276 1.00 45.28 N
ATOM 15 C2 C A 4 79.607 19.644 14.806 1.00 45.26 C
ATOM 16 O2 C A 4 79.858 19.507 13.599 1.00 45.39 O
ATOM 17 N3 C A 4 79.675 18.608 15.674 1.00 44.51 N
ATOM 18 C4 C A 4 79.393 18.801 16.962 1.00 43.99 C
ATOM 19 N4 C A 4 79.481 17.757 17.785 1.00 44.53 N
ATOM 20 C5 C A 4 79.010 20.076 17.467 1.00 45.28 C
ATOM 21 C6 C A 4 78.947 21.091 16.597 1.00 45.93 C
ATOM 22 P U A 5 74.569 22.805 13.644 1.00 44.96 P
ATOM 23 OP1 U A 5 73.585 23.645 12.913 1.00 44.03 O
ATOM 24 OP2 U A 5 74.285 22.386 15.041 1.00 43.58 O
ATOM 25 O5' U A 5 74.867 21.508 12.769 1.00 41.58 O
TER
ATOM 1 O3' U B 2 80.827 23.411 24.618 1.00 51.86 O
ATOM 2 P G B 3 79.526 23.071 23.740 1.00 54.11 P
ATOM 3 OP1 G B 3 78.505 24.094 24.052 1.00 55.67 O
ATOM 4 OP2 G B 3 79.202 21.632 23.921 1.00 51.23 O
ATOM 5 O5' G B 3 80.004 23.303 22.238 1.00 54.56 O
ATOM 6 C5' G B 3 80.396 24.610 21.787 1.00 55.52 C
ATOM 7 C4' G B 3 80.646 24.605 20.296 1.00 55.91 C
ATOM 8 O4' G B 3 81.815 23.809 19.980 1.00 55.74 O
ATOM 9 C3' G B 3 79.561 23.986 19.431 1.00 55.45 C
ATOM 10 O3' G B 3 78.485 24.887 19.224 1.00 55.24 O
ATOM 11 C2' G B 3 80.309 23.717 18.133 1.00 55.61 C
ATOM 12 O2' G B 3 80.432 24.864 17.326 1.00 54.76 O
ATOM 13 C1' G B 3 81.692 23.315 18.654 1.00 57.00 C
ATOM 14 N9 G B 3 81.880 21.868 18.656 1.00 58.78 N
ATOM 15 C8 G B 3 81.673 20.991 19.695 1.00 59.00 C
ATOM 16 N7 G B 3 81.908 19.749 19.367 1.00 59.52 N
ATOM 17 C5 G B 3 82.297 19.811 18.034 1.00 60.55 C
ATOM 18 C6 G B 3 82.674 18.780 17.129 1.00 61.52 C
ATOM 19 O6 G B 3 82.738 17.562 17.329 1.00 62.94 O
ATOM 20 N1 G B 3 82.995 19.291 15.877 1.00 61.05 N
ATOM 21 C2 G B 3 82.956 20.616 15.532 1.00 60.11 C
ATOM 22 N2 G B 3 83.308 20.911 14.270 1.00 60.44 N
ATOM 23 N3 G B 3 82.603 21.584 16.359 1.00 59.51 N
ATOM 24 C4 G B 3 82.289 21.112 17.584 1.00 59.53 C
ATOM 25 P C B 4 77.097 24.348 18.625 1.00 55.37 P
ATOM 26 OP1 C B 4 76.182 25.513 18.491 1.00 56.56 O
ATOM 27 OP2 C B 4 76.675 23.174 19.429 1.00 55.09 O
ATOM 28 O5' C B 4 77.479 23.840 17.165 1.00 52.70 O
TER
ATOM 2 P C A 4 77.097 24.348 18.625 1.00 55.37 P
ATOM 3 OP1 C A 4 76.182 25.513 18.491 1.00 56.56 O
ATOM 4 OP2 C A 4 76.675 23.174 19.429 1.00 55.09 O
ATOM 5 O5' C A 4 77.479 23.840 17.165 1.00 52.70 O
ATOM 6 C5' C A 4 77.743 24.774 16.105 1.00 48.59 C
ATOM 7 C4' C A 4 78.082 24.033 14.839 1.00 46.75 C
ATOM 8 O4' C A 4 79.282 23.242 15.054 1.00 45.99 O
ATOM 9 C3' C A 4 77.051 23.007 14.410 1.00 46.34 C
ATOM 10 O3' C A 4 75.974 23.576 13.688 1.00 44.97 O
ATOM 11 C2' C A 4 77.872 22.059 13.550 1.00 46.70 C
ATOM 12 O2' C A 4 78.101 22.561 12.250 1.00 47.89 O
ATOM 13 C1' C A 4 79.187 22.025 14.326 1.00 45.92 C
ATOM 14 N1 C A 4 79.242 20.906 15.276 1.00 45.28 N
ATOM 15 C2 C A 4 79.607 19.644 14.806 1.00 45.26 C
ATOM 16 O2 C A 4 79.858 19.507 13.599 1.00 45.39 O
ATOM 17 N3 C A 4 79.675 18.608 15.674 1.00 44.51 N
ATOM 18 C4 C A 4 79.393 18.801 16.962 1.00 43.99 C
ATOM 19 N4 C A 4 79.481 17.757 17.785 1.00 44.53 N
ATOM 20 C5 C A 4 79.010 20.076 17.467 1.00 45.28 C
ATOM 21 C6 C A 4 78.947 21.091 16.597 1.00 45.93 C
ATOM 22 P U A 5 74.569 22.805 13.644 1.00 44.96 P
ATOM 23 OP1 U A 5 73.585 23.645 12.913 1.00 44.03 O
ATOM 24 OP2 U A 5 74.285 22.386 15.041 1.00 43.58 O
ATOM 25 O5' U A 5 74.867 21.508 12.769 1.00 41.58 O
TER
ATOM 1 O3' U B 2 80.827 23.411 24.618 1.00 51.86 O
ATOM 2 P G B 3 79.526 23.071 23.740 1.00 54.11 P
ATOM 3 OP1 G B 3 78.505 24.094 24.052 1.00 55.67 O
ATOM 4 OP2 G B 3 79.202 21.632 23.921 1.00 51.23 O
ATOM 5 O5' G B 3 80.004 23.303 22.238 1.00 54.56 O
ATOM 6 C5' G B 3 80.396 24.610 21.787 1.00 55.52 C
ATOM 7 C4' G B 3 80.646 24.605 20.296 1.00 55.91 C
ATOM 8 O4' G B 3 81.815 23.809 19.980 1.00 55.74 O
ATOM 9 C3' G B 3 79.561 23.986 19.431 1.00 55.45 C
ATOM 10 O3' G B 3 78.485 24.887 19.224 1.00 55.24 O
ATOM 11 C2' G B 3 80.309 23.717 18.133 1.00 55.61 C
ATOM 12 O2' G B 3 80.432 24.864 17.326 1.00 54.76 O
ATOM 13 C1' G B 3 81.692 23.315 18.654 1.00 57.00 C
ATOM 14 N9 G B 3 81.880 21.868 18.656 1.00 58.78 N
ATOM 15 C8 G B 3 81.673 20.991 19.695 1.00 59.00 C
ATOM 16 N7 G B 3 81.908 19.749 19.367 1.00 59.52 N
ATOM 17 C5 G B 3 82.297 19.811 18.034 1.00 60.55 C
ATOM 18 C6 G B 3 82.674 18.780 17.129 1.00 61.52 C
ATOM 19 O6 G B 3 82.738 17.562 17.329 1.00 62.94 O
ATOM 20 N1 G B 3 82.995 19.291 15.877 1.00 61.05 N
ATOM 21 C2 G B 3 82.956 20.616 15.532 1.00 60.11 C
ATOM 22 N2 G B 3 83.308 20.911 14.270 1.00 60.44 N
ATOM 23 N3 G B 3 82.603 21.584 16.359 1.00 59.51 N
ATOM 24 C4 G B 3 82.289 21.112 17.584 1.00 59.53 C
ATOM 25 P C B 4 77.097 24.348 18.625 1.00 55.37 P
ATOM 26 OP1 C B 4 76.182 25.513 18.491 1.00 56.56 O
ATOM 27 OP2 C B 4 76.675 23.174 19.429 1.00 55.09 O
ATOM 28 O5' C B 4 77.479 23.840 17.165 1.00 52.70 O
TER
Atoms:
C2: (79.607,19.644,14.806)
OP1: (76.182,25.513,18.491)
OP2: (76.675,23.174,19.429)
C4: (79.393,18.801,16.962)
O5': (77.479,23.840,17.165)
C3': (77.051,23.007,14.410)
C1': (79.187,22.025,14.326)
O4': (79.282,23.242,15.054)
C5': (77.743,24.774,16.105)
P: (77.097,24.348,18.625)
O2: (79.858,19.507,13.599)
C4': (78.082,24.033,14.839)
C2': (77.872,22.059,13.550)
O2': (78.101,22.561,12.250)
N1: (79.242,20.906,15.276)
N3: (79.675,18.608,15.674)
N4: (79.481,17.757,17.785)
C6: (78.947,21.091,16.597)
C5: (79.010,20.076,17.467)
O3': (75.974,23.576,13.688)
OP1: (76.182,25.513,18.491)
OP2: (76.675,23.174,19.429)
C4: (79.393,18.801,16.962)
O5': (77.479,23.840,17.165)
C3': (77.051,23.007,14.410)
C1': (79.187,22.025,14.326)
O4': (79.282,23.242,15.054)
C5': (77.743,24.774,16.105)
P: (77.097,24.348,18.625)
O2: (79.858,19.507,13.599)
C4': (78.082,24.033,14.839)
C2': (77.872,22.059,13.550)
O2': (78.101,22.561,12.250)
N1: (79.242,20.906,15.276)
N3: (79.675,18.608,15.674)
N4: (79.481,17.757,17.785)
C6: (78.947,21.091,16.597)
C5: (79.010,20.076,17.467)
O3': (75.974,23.576,13.688)
OP1: (78.505,24.094,24.052)
OP2: (79.202,21.632,23.921)
C3': (79.561,23.986,19.431)
C1': (81.692,23.315,18.654)
C5': (80.396,24.610,21.787)
O6: (82.738,17.562,17.329)
O4': (81.815,23.809,19.980)
C8: (81.673,20.991,19.695)
C2: (82.956,20.616,15.532)
C6: (82.674,18.780,17.129)
C5: (82.297,19.811,18.034)
C4: (82.289,21.112,17.584)
P: (79.526,23.071,23.740)
C4': (80.646,24.605,20.296)
C2': (80.309,23.717,18.133)
O2': (80.432,24.864,17.326)
N1: (82.995,19.291,15.877)
N2: (83.308,20.911,14.270)
N3: (82.603,21.584,16.359)
N7: (81.908,19.749,19.367)
N9: (81.880,21.868,18.656)
O5': (80.004,23.303,22.238)
O3': (78.485,24.887,19.224)
OP2: (79.202,21.632,23.921)
C3': (79.561,23.986,19.431)
C1': (81.692,23.315,18.654)
C5': (80.396,24.610,21.787)
O6: (82.738,17.562,17.329)
O4': (81.815,23.809,19.980)
C8: (81.673,20.991,19.695)
C2: (82.956,20.616,15.532)
C6: (82.674,18.780,17.129)
C5: (82.297,19.811,18.034)
C4: (82.289,21.112,17.584)
P: (79.526,23.071,23.740)
C4': (80.646,24.605,20.296)
C2': (80.309,23.717,18.133)
O2': (80.432,24.864,17.326)
N1: (82.995,19.291,15.877)
N2: (83.308,20.911,14.270)
N3: (82.603,21.584,16.359)
N7: (81.908,19.749,19.367)
N9: (81.880,21.868,18.656)
O5': (80.004,23.303,22.238)
O3': (78.485,24.887,19.224)
Image (generated by PyMOL):