ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CXC:0281:0347

Extra

PDB:
ATOM 1 O3' G A 280 51.533 127.937 2.505 1.00 95.80 O
ATOM 2 P A A 281 51.327 128.736 3.894 1.00 98.07 P
ATOM 3 OP1 A A 281 50.048 129.527 3.825 1.00 96.22 O
ATOM 4 OP2 A A 281 52.629 129.442 4.185 1.00 97.51 O
ATOM 5 O5' A A 281 51.145 127.566 4.965 1.00 96.11 O
ATOM 6 C5' A A 281 49.896 127.376 5.663 1.00 94.85 C
ATOM 7 C4' A A 281 48.952 126.547 4.824 1.00 93.33 C
ATOM 8 O4' A A 281 49.685 125.450 4.227 1.00 92.06 O
ATOM 9 C3' A A 281 47.817 125.890 5.596 1.00 92.97 C
ATOM 10 O3' A A 281 46.696 126.741 5.779 1.00 92.94 O
ATOM 11 C2' A A 281 47.499 124.662 4.756 1.00 92.34 C
ATOM 12 O2' A A 281 46.640 124.925 3.665 1.00 92.56 O
ATOM 13 C1' A A 281 48.890 124.276 4.253 1.00 91.78 C
ATOM 14 N9 A A 281 49.531 123.324 5.160 1.00 90.87 N
ATOM 15 C8 A A 281 50.730 123.450 5.830 1.00 90.64 C
ATOM 16 N7 A A 281 51.037 122.406 6.563 1.00 89.13 N
ATOM 17 C5 A A 281 49.970 121.535 6.366 1.00 89.38 C
ATOM 18 C6 A A 281 49.701 120.244 6.849 1.00 88.19 C
ATOM 19 N6 A A 281 50.518 119.566 7.662 1.00 86.72 N
ATOM 20 N1 A A 281 48.547 119.657 6.456 1.00 88.76 N
ATOM 21 C2 A A 281 47.729 120.329 5.633 1.00 88.39 C
ATOM 22 N3 A A 281 47.874 121.540 5.109 1.00 88.73 N
ATOM 23 C4 A A 281 49.031 122.094 5.515 1.00 89.84 C
ATOM 24 P C A 282 45.778 126.560 7.085 1.00 92.52 P
ATOM 25 OP1 C A 282 44.938 127.771 7.268 1.00 92.42 O
ATOM 26 OP2 C A 282 46.673 126.106 8.188 1.00 93.23 O
ATOM 27 O5' C A 282 44.812 125.359 6.703 1.00 93.22 O
TER

ATOM 1 O3' G B 346 59.424 123.746 8.966 1.00 95.31 O
ATOM 2 P U B 347 60.262 122.714 8.030 1.00 96.75 P
ATOM 3 OP1 U B 347 61.658 122.543 8.540 1.00 95.68 O
ATOM 4 OP2 U B 347 60.040 123.081 6.596 1.00 96.70 O
ATOM 5 O5' U B 347 59.493 121.326 8.219 1.00 95.75 O
ATOM 6 C5' U B 347 59.584 120.567 9.450 1.00 95.11 C
ATOM 7 C4' U B 347 58.233 119.968 9.797 1.00 94.17 C
ATOM 8 O4' U B 347 57.300 121.034 10.115 1.00 93.27 O
ATOM 9 C3' U B 347 57.550 119.161 8.697 1.00 94.36 C
ATOM 10 O3' U B 347 58.005 117.803 8.711 1.00 96.75 O
ATOM 11 C2' U B 347 56.062 119.289 9.039 1.00 92.57 C
ATOM 12 O2' U B 347 55.583 118.328 9.955 1.00 92.78 O
ATOM 13 C1' U B 347 55.995 120.668 9.705 1.00 91.18 C
ATOM 14 N1 U B 347 55.426 121.747 8.876 1.00 88.88 N
ATOM 15 C2 U B 347 54.066 121.675 8.568 1.00 88.30 C
ATOM 16 O2 U B 347 53.339 120.761 8.950 1.00 87.76 O
ATOM 17 N3 U B 347 53.591 122.711 7.797 1.00 86.75 N
ATOM 18 C4 U B 347 54.309 123.794 7.319 1.00 86.58 C
ATOM 19 O4 U B 347 53.726 124.669 6.673 1.00 85.91 O
ATOM 20 C5 U B 347 55.699 123.797 7.675 1.00 86.17 C
ATOM 21 C6 U B 347 56.199 122.800 8.418 1.00 87.28 C
ATOM 22 P A B 348 58.074 116.954 7.337 1.00 98.97 P
ATOM 23 OP1 A B 348 58.615 115.609 7.700 1.00 98.05 O
ATOM 24 OP2 A B 348 58.757 117.758 6.279 1.00 97.55 O
ATOM 25 O5' A B 348 56.545 116.769 6.915 1.00 97.54 O
TER

Atoms:
OP1: (50.048,129.527,3.825)
OP2: (52.629,129.442,4.185)
C3': (47.817,125.890,5.596)
C1': (48.890,124.276,4.253)
C5': (49.896,127.376,5.663)
O4': (49.685,125.450,4.227)
C8: (50.730,123.450,5.830)
O2': (46.640,124.925,3.665)
C6: (49.701,120.244,6.849)
C5: (49.970,121.535,6.366)
C4: (49.031,122.094,5.515)
P: (51.327,128.736,3.894)
C4': (48.952,126.547,4.824)
C2': (47.499,124.662,4.756)
C2: (47.729,120.329,5.633)
N1: (48.547,119.657,6.456)
N3: (47.874,121.540,5.109)
N6: (50.518,119.566,7.662)
N7: (51.037,122.406,6.563)
N9: (49.531,123.324,5.160)
O5': (51.145,127.566,4.965)
O3': (46.696,126.741,5.779)
C4: (54.309,123.794,7.319)
N3: (53.591,122.711,7.797)
OP1: (61.658,122.543,8.540)
OP2: (60.040,123.081,6.596)
C2: (54.066,121.675,8.568)
C1': (55.995,120.668,9.705)
C3': (57.550,119.161,8.697)
O5': (59.493,121.326,8.219)
O4': (57.300,121.034,10.115)
C5': (59.584,120.567,9.450)
P: (60.262,122.714,8.030)
C4': (58.233,119.968,9.797)
C2': (56.062,119.289,9.039)
O2': (55.583,118.328,9.955)
N1: (55.426,121.747,8.876)
O4: (53.726,124.669,6.673)
O2: (53.339,120.761,8.950)
C6: (56.199,122.800,8.418)
C5: (55.699,123.797,7.675)
O3': (58.005,117.803,8.711)
Image (generated by PyMOL):
PyMOL image
show in jmol