ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1519:A1520

Extra

PDB:
ATOM 1 O3' C A1518 10.230 -8.005 -47.620 1.00 93.00 O
ATOM 2 P U A1519 8.916 -8.368 -48.461 1.00 77.83 P
ATOM 3 OP1 U A1519 7.765 -7.864 -47.680 1.00 84.95 O
ATOM 4 OP2 U A1519 8.980 -9.814 -48.777 1.00 94.52 O
ATOM 5 O5' U A1519 9.097 -7.541 -49.800 1.00100.43 O
ATOM 6 C5' U A1519 9.362 -8.216 -51.020 1.00119.22 C
ATOM 7 C4' U A1519 10.841 -8.364 -51.257 1.00117.08 C
ATOM 8 O4' U A1519 11.463 -9.034 -50.130 1.00100.37 O
ATOM 9 C3' U A1519 11.255 -9.217 -52.441 1.00119.00 C
ATOM 10 O3' U A1519 11.118 -8.559 -53.691 1.00123.82 O
ATOM 11 C2' U A1519 12.689 -9.546 -52.083 1.00111.88 C
ATOM 12 O2' U A1519 13.516 -8.412 -52.267 1.00120.83 O
ATOM 13 C1' U A1519 12.559 -9.800 -50.586 1.00 99.88 C
ATOM 14 N1 U A1519 12.289 -11.223 -50.307 1.00 76.06 N
ATOM 15 C2 U A1519 13.096 -12.172 -50.921 1.00 74.35 C
ATOM 16 O2 U A1519 14.015 -11.887 -51.647 1.00 78.15 O
ATOM 17 N3 U A1519 12.812 -13.494 -50.673 1.00 74.25 N
ATOM 18 C4 U A1519 11.800 -13.981 -49.860 1.00 69.50 C
ATOM 19 O4 U A1519 11.644 -15.209 -49.711 1.00 63.47 O
ATOM 20 C5 U A1519 11.019 -12.937 -49.254 1.00 65.43 C
ATOM 21 C6 U A1519 11.271 -11.638 -49.496 1.00 73.59 C
ATOM 22 P A A1520 10.388 -9.301 -54.916 1.00 89.51 P
ATOM 23 OP1 A A1520 9.651 -8.267 -55.679 1.00154.87 O
ATOM 24 OP2 A A1520 9.632 -10.441 -54.339 1.00135.10 O
ATOM 25 O5' A A1520 11.595 -9.838 -55.783 1.00 71.50 O
TER

ATOM 1 O3' U B1519 11.118 -8.559 -53.691 1.00123.82 O
ATOM 2 P A B1520 10.388 -9.301 -54.916 1.00 89.51 P
ATOM 3 OP1 A B1520 9.651 -8.267 -55.679 1.00154.87 O
ATOM 4 OP2 A B1520 9.632 -10.441 -54.339 1.00135.10 O
ATOM 5 O5' A B1520 11.595 -9.838 -55.783 1.00 71.50 O
ATOM 6 C5' A B1520 12.769 -10.296 -55.154 1.00 80.85 C
ATOM 7 C4' A B1520 13.825 -10.691 -56.143 1.00 76.27 C
ATOM 8 O4' A B1520 14.786 -11.542 -55.476 1.00 78.78 O
ATOM 9 C3' A B1520 13.339 -11.500 -57.340 1.00 88.15 C
ATOM 10 O3' A B1520 12.967 -10.676 -58.440 1.00 88.17 O
ATOM 11 C2' A B1520 14.509 -12.452 -57.632 1.00 84.18 C
ATOM 12 O2' A B1520 15.522 -11.811 -58.397 1.00 76.70 O
ATOM 13 C1' A B1520 15.057 -12.690 -56.238 1.00 74.52 C
ATOM 14 N9 A B1520 14.425 -13.835 -55.565 1.00 68.70 N
ATOM 15 C8 A B1520 13.480 -13.764 -54.572 1.00 72.42 C
ATOM 16 N7 A B1520 13.100 -14.926 -54.107 1.00 78.23 N
ATOM 17 C5 A B1520 13.865 -15.818 -54.846 1.00 83.60 C
ATOM 18 C6 A B1520 13.932 -17.227 -54.831 1.00 86.91 C
ATOM 19 N6 A B1520 13.172 -17.959 -54.006 1.00 81.81 N
ATOM 20 N1 A B1520 14.801 -17.836 -55.692 1.00 81.31 N
ATOM 21 C2 A B1520 15.532 -17.047 -56.505 1.00 78.18 C
ATOM 22 N3 A B1520 15.558 -15.709 -56.605 1.00 71.64 N
ATOM 23 C4 A B1520 14.698 -15.156 -55.736 1.00 72.64 C
ATOM 24 P A B1521 11.863 -11.164 -59.487 1.00106.00 P
ATOM 25 OP1 A B1521 10.867 -10.073 -59.617 1.00 99.88 O
ATOM 26 OP2 A B1521 11.413 -12.493 -59.058 1.00 99.12 O
ATOM 27 O5' A B1521 12.689 -11.302 -60.816 1.00 70.45 O
TER

Atoms:
C4: (11.800,-13.981,-49.860)
N3: (12.812,-13.494,-50.673)
OP1: (7.765,-7.864,-47.680)
OP2: (8.980,-9.814,-48.777)
C2: (13.096,-12.172,-50.921)
C1': (12.559,-9.800,-50.586)
C3': (11.255,-9.217,-52.441)
O5': (9.097,-7.541,-49.800)
O4': (11.463,-9.034,-50.130)
C5': (9.362,-8.216,-51.020)
P: (8.916,-8.368,-48.461)
C4': (10.841,-8.364,-51.257)
C2': (12.689,-9.546,-52.083)
O2': (13.516,-8.412,-52.267)
N1: (12.289,-11.223,-50.307)
O4: (11.644,-15.209,-49.711)
O2: (14.015,-11.887,-51.647)
C6: (11.271,-11.638,-49.496)
C5: (11.019,-12.937,-49.254)
O3': (11.118,-8.559,-53.691)
OP1: (9.651,-8.267,-55.679)
OP2: (9.632,-10.441,-54.339)
C3': (13.339,-11.500,-57.340)
C1': (15.057,-12.690,-56.238)
C5': (12.769,-10.296,-55.154)
O4': (14.786,-11.542,-55.476)
C8: (13.480,-13.764,-54.572)
O2': (15.522,-11.811,-58.397)
C6: (13.932,-17.227,-54.831)
C5: (13.865,-15.818,-54.846)
C4: (14.698,-15.156,-55.736)
P: (10.388,-9.301,-54.916)
C4': (13.825,-10.691,-56.143)
C2': (14.509,-12.452,-57.632)
C2: (15.532,-17.047,-56.505)
N1: (14.801,-17.836,-55.692)
N3: (15.558,-15.709,-56.605)
N6: (13.172,-17.959,-54.006)
N7: (13.100,-14.926,-54.107)
N9: (14.425,-13.835,-55.565)
O5': (11.595,-9.838,-55.783)
O3': (12.967,-10.676,-58.440)
Image (generated by PyMOL):
PyMOL image
show in jmol