Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1I9V:A12:A13
Extra
PDB:
ATOM 1 O3' U A 11 10.064 9.172 2.453 1.00 41.36 O
ATOM 2 P C A 12 10.364 8.308 1.088 1.00 35.38 P
ATOM 3 OP1 C A 12 10.075 8.877 -0.257 1.00 38.37 O
ATOM 4 OP2 C A 12 9.682 7.047 1.479 1.00 34.87 O
ATOM 5 O5' C A 12 11.972 8.158 1.191 1.00 38.22 O
ATOM 6 C5' C A 12 12.788 7.287 0.358 1.00 32.36 C
ATOM 7 C4' C A 12 14.079 6.967 1.099 1.00 31.27 C
ATOM 8 O4' C A 12 13.714 6.330 2.353 1.00 30.85 O
ATOM 9 C3' C A 12 15.054 5.956 0.517 1.00 31.75 C
ATOM 10 O3' C A 12 15.937 6.523 -0.436 1.00 34.16 O
ATOM 11 C2' C A 12 15.857 5.539 1.740 1.00 29.73 C
ATOM 12 O2' C A 12 16.833 6.485 2.080 1.00 31.01 O
ATOM 13 C1' C A 12 14.801 5.552 2.841 1.00 28.07 C
ATOM 14 N1 C A 12 14.298 4.222 3.276 1.00 25.95 N
ATOM 15 C2 C A 12 15.164 3.334 3.959 1.00 22.65 C
ATOM 16 O2 C A 12 16.320 3.665 4.164 1.00 26.79 O
ATOM 17 N3 C A 12 14.707 2.137 4.359 1.00 20.62 N
ATOM 18 C4 C A 12 13.448 1.779 4.078 1.00 21.62 C
ATOM 19 N4 C A 12 13.053 0.547 4.420 1.00 20.11 N
ATOM 20 C5 C A 12 12.538 2.654 3.411 1.00 21.88 C
ATOM 21 C6 C A 12 13.001 3.853 3.026 1.00 25.06 C
ATOM 22 P A A 13 16.592 5.584 -1.570 1.00 36.45 P
ATOM 23 OP1 A A 13 17.153 6.512 -2.597 1.00 36.66 O
ATOM 24 OP2 A A 13 15.604 4.511 -1.982 1.00 36.85 O
ATOM 25 O5' A A 13 17.806 4.860 -0.823 1.00 35.55 O
TER
ATOM 1 O3' C B 12 15.937 6.523 -0.436 1.00 34.16 O
ATOM 2 P A B 13 16.592 5.584 -1.570 1.00 36.45 P
ATOM 3 OP1 A B 13 17.153 6.512 -2.597 1.00 36.66 O
ATOM 4 OP2 A B 13 15.604 4.511 -1.982 1.00 36.85 O
ATOM 5 O5' A B 13 17.806 4.860 -0.823 1.00 35.55 O
ATOM 6 C5' A B 13 18.937 5.608 -0.455 1.00 32.44 C
ATOM 7 C4' A B 13 19.938 4.768 0.298 1.00 30.45 C
ATOM 8 O4' A B 13 19.337 4.156 1.443 1.00 28.49 O
ATOM 9 C3' A B 13 20.595 3.561 -0.337 1.00 29.60 C
ATOM 10 O3' A B 13 21.570 3.924 -1.298 1.00 30.67 O
ATOM 11 C2' A B 13 21.291 2.959 0.884 1.00 28.28 C
ATOM 12 O2' A B 13 22.463 3.619 1.346 1.00 30.57 O
ATOM 13 C1' A B 13 20.247 3.202 1.957 1.00 26.06 C
ATOM 14 N9 A B 13 19.545 1.968 2.192 1.00 23.51 N
ATOM 15 C8 A B 13 18.262 1.605 1.864 1.00 22.47 C
ATOM 16 N7 A B 13 17.954 0.396 2.238 1.00 22.90 N
ATOM 17 C5 A B 13 19.111 -0.067 2.854 1.00 22.61 C
ATOM 18 C6 A B 13 19.439 -1.281 3.451 1.00 21.89 C
ATOM 19 N6 A B 13 18.561 -2.276 3.615 1.00 24.37 N
ATOM 20 N1 A B 13 20.707 -1.442 3.903 1.00 21.94 N
ATOM 21 C2 A B 13 21.559 -0.423 3.810 1.00 20.09 C
ATOM 22 N3 A B 13 21.352 0.789 3.307 1.00 23.63 N
ATOM 23 C4 A B 13 20.097 0.893 2.825 1.00 23.57 C
ATOM 24 P G B 14 21.768 3.016 -2.601 1.00 27.75 P
ATOM 25 OP1 G B 14 22.908 3.644 -3.341 1.00 30.01 O
ATOM 26 OP2 G B 14 20.461 2.861 -3.259 1.00 28.07 O
ATOM 27 O5' G B 14 22.208 1.612 -2.011 1.00 26.43 O
TER
ATOM 2 P C A 12 10.364 8.308 1.088 1.00 35.38 P
ATOM 3 OP1 C A 12 10.075 8.877 -0.257 1.00 38.37 O
ATOM 4 OP2 C A 12 9.682 7.047 1.479 1.00 34.87 O
ATOM 5 O5' C A 12 11.972 8.158 1.191 1.00 38.22 O
ATOM 6 C5' C A 12 12.788 7.287 0.358 1.00 32.36 C
ATOM 7 C4' C A 12 14.079 6.967 1.099 1.00 31.27 C
ATOM 8 O4' C A 12 13.714 6.330 2.353 1.00 30.85 O
ATOM 9 C3' C A 12 15.054 5.956 0.517 1.00 31.75 C
ATOM 10 O3' C A 12 15.937 6.523 -0.436 1.00 34.16 O
ATOM 11 C2' C A 12 15.857 5.539 1.740 1.00 29.73 C
ATOM 12 O2' C A 12 16.833 6.485 2.080 1.00 31.01 O
ATOM 13 C1' C A 12 14.801 5.552 2.841 1.00 28.07 C
ATOM 14 N1 C A 12 14.298 4.222 3.276 1.00 25.95 N
ATOM 15 C2 C A 12 15.164 3.334 3.959 1.00 22.65 C
ATOM 16 O2 C A 12 16.320 3.665 4.164 1.00 26.79 O
ATOM 17 N3 C A 12 14.707 2.137 4.359 1.00 20.62 N
ATOM 18 C4 C A 12 13.448 1.779 4.078 1.00 21.62 C
ATOM 19 N4 C A 12 13.053 0.547 4.420 1.00 20.11 N
ATOM 20 C5 C A 12 12.538 2.654 3.411 1.00 21.88 C
ATOM 21 C6 C A 12 13.001 3.853 3.026 1.00 25.06 C
ATOM 22 P A A 13 16.592 5.584 -1.570 1.00 36.45 P
ATOM 23 OP1 A A 13 17.153 6.512 -2.597 1.00 36.66 O
ATOM 24 OP2 A A 13 15.604 4.511 -1.982 1.00 36.85 O
ATOM 25 O5' A A 13 17.806 4.860 -0.823 1.00 35.55 O
TER
ATOM 1 O3' C B 12 15.937 6.523 -0.436 1.00 34.16 O
ATOM 2 P A B 13 16.592 5.584 -1.570 1.00 36.45 P
ATOM 3 OP1 A B 13 17.153 6.512 -2.597 1.00 36.66 O
ATOM 4 OP2 A B 13 15.604 4.511 -1.982 1.00 36.85 O
ATOM 5 O5' A B 13 17.806 4.860 -0.823 1.00 35.55 O
ATOM 6 C5' A B 13 18.937 5.608 -0.455 1.00 32.44 C
ATOM 7 C4' A B 13 19.938 4.768 0.298 1.00 30.45 C
ATOM 8 O4' A B 13 19.337 4.156 1.443 1.00 28.49 O
ATOM 9 C3' A B 13 20.595 3.561 -0.337 1.00 29.60 C
ATOM 10 O3' A B 13 21.570 3.924 -1.298 1.00 30.67 O
ATOM 11 C2' A B 13 21.291 2.959 0.884 1.00 28.28 C
ATOM 12 O2' A B 13 22.463 3.619 1.346 1.00 30.57 O
ATOM 13 C1' A B 13 20.247 3.202 1.957 1.00 26.06 C
ATOM 14 N9 A B 13 19.545 1.968 2.192 1.00 23.51 N
ATOM 15 C8 A B 13 18.262 1.605 1.864 1.00 22.47 C
ATOM 16 N7 A B 13 17.954 0.396 2.238 1.00 22.90 N
ATOM 17 C5 A B 13 19.111 -0.067 2.854 1.00 22.61 C
ATOM 18 C6 A B 13 19.439 -1.281 3.451 1.00 21.89 C
ATOM 19 N6 A B 13 18.561 -2.276 3.615 1.00 24.37 N
ATOM 20 N1 A B 13 20.707 -1.442 3.903 1.00 21.94 N
ATOM 21 C2 A B 13 21.559 -0.423 3.810 1.00 20.09 C
ATOM 22 N3 A B 13 21.352 0.789 3.307 1.00 23.63 N
ATOM 23 C4 A B 13 20.097 0.893 2.825 1.00 23.57 C
ATOM 24 P G B 14 21.768 3.016 -2.601 1.00 27.75 P
ATOM 25 OP1 G B 14 22.908 3.644 -3.341 1.00 30.01 O
ATOM 26 OP2 G B 14 20.461 2.861 -3.259 1.00 28.07 O
ATOM 27 O5' G B 14 22.208 1.612 -2.011 1.00 26.43 O
TER
Atoms:
C2: (15.164,3.334,3.959)
OP1: (10.075,8.877,-0.257)
OP2: (9.682,7.047,1.479)
C4: (13.448,1.779,4.078)
O5': (11.972,8.158,1.191)
C3': (15.054,5.956,0.517)
C1': (14.801,5.552,2.841)
O4': (13.714,6.330,2.353)
C5': (12.788,7.287,0.358)
P: (10.364,8.308,1.088)
O2: (16.320,3.665,4.164)
C4': (14.079,6.967,1.099)
C2': (15.857,5.539,1.740)
O2': (16.833,6.485,2.080)
N1: (14.298,4.222,3.276)
N3: (14.707,2.137,4.359)
N4: (13.053,0.547,4.420)
C6: (13.001,3.853,3.026)
C5: (12.538,2.654,3.411)
O3': (15.937,6.523,-0.436)
OP1: (10.075,8.877,-0.257)
OP2: (9.682,7.047,1.479)
C4: (13.448,1.779,4.078)
O5': (11.972,8.158,1.191)
C3': (15.054,5.956,0.517)
C1': (14.801,5.552,2.841)
O4': (13.714,6.330,2.353)
C5': (12.788,7.287,0.358)
P: (10.364,8.308,1.088)
O2: (16.320,3.665,4.164)
C4': (14.079,6.967,1.099)
C2': (15.857,5.539,1.740)
O2': (16.833,6.485,2.080)
N1: (14.298,4.222,3.276)
N3: (14.707,2.137,4.359)
N4: (13.053,0.547,4.420)
C6: (13.001,3.853,3.026)
C5: (12.538,2.654,3.411)
O3': (15.937,6.523,-0.436)
OP1: (17.153,6.512,-2.597)
OP2: (15.604,4.511,-1.982)
C3': (20.595,3.561,-0.337)
C1': (20.247,3.202,1.957)
C5': (18.937,5.608,-0.455)
O4': (19.337,4.156,1.443)
C8: (18.262,1.605,1.864)
O2': (22.463,3.619,1.346)
C6: (19.439,-1.281,3.451)
C5: (19.111,-0.067,2.854)
C4: (20.097,0.893,2.825)
P: (16.592,5.584,-1.570)
C4': (19.938,4.768,0.298)
C2': (21.291,2.959,0.884)
C2: (21.559,-0.423,3.810)
N1: (20.707,-1.442,3.903)
N3: (21.352,0.789,3.307)
N6: (18.561,-2.276,3.615)
N7: (17.954,0.396,2.238)
N9: (19.545,1.968,2.192)
O5': (17.806,4.860,-0.823)
O3': (21.570,3.924,-1.298)
OP2: (15.604,4.511,-1.982)
C3': (20.595,3.561,-0.337)
C1': (20.247,3.202,1.957)
C5': (18.937,5.608,-0.455)
O4': (19.337,4.156,1.443)
C8: (18.262,1.605,1.864)
O2': (22.463,3.619,1.346)
C6: (19.439,-1.281,3.451)
C5: (19.111,-0.067,2.854)
C4: (20.097,0.893,2.825)
P: (16.592,5.584,-1.570)
C4': (19.938,4.768,0.298)
C2': (21.291,2.959,0.884)
C2: (21.559,-0.423,3.810)
N1: (20.707,-1.442,3.903)
N3: (21.352,0.789,3.307)
N6: (18.561,-2.276,3.615)
N7: (17.954,0.396,2.238)
N9: (19.545,1.968,2.192)
O5': (17.806,4.860,-0.823)
O3': (21.570,3.924,-1.298)
Image (generated by PyMOL):