Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B19:B20
Extra
PDB:
ATOM 1 O3' U A 18 -6.843 17.590 -0.306 1.00 38.51 O
ATOM 2 P C A 19 -7.459 17.091 -1.700 1.00 40.70 P
ATOM 3 OP1 C A 19 -6.476 16.186 -2.338 1.00 39.84 O
ATOM 4 OP2 C A 19 -7.935 18.286 -2.428 1.00 34.33 O
ATOM 5 O5' C A 19 -8.741 16.238 -1.259 1.00 42.50 O
ATOM 6 C5' C A 19 -9.780 16.890 -0.532 1.00 45.60 C
ATOM 7 C4' C A 19 -11.134 16.239 -0.750 1.00 43.60 C
ATOM 8 O4' C A 19 -11.052 14.821 -0.454 1.00 41.20 O
ATOM 9 C3' C A 19 -12.234 16.780 0.152 1.00 42.33 C
ATOM 10 O3' C A 19 -12.880 17.881 -0.473 1.00 45.28 O
ATOM 11 C2' C A 19 -13.170 15.582 0.271 1.00 45.60 C
ATOM 12 O2' C A 19 -14.043 15.469 -0.835 1.00 47.00 O
ATOM 13 C1' C A 19 -12.189 14.414 0.285 1.00 42.22 C
ATOM 14 N1 C A 19 -11.735 14.016 1.648 1.00 46.42 N
ATOM 15 C2 C A 19 -12.653 13.506 2.576 1.00 48.18 C
ATOM 16 O2 C A 19 -13.843 13.395 2.257 1.00 46.20 O
ATOM 17 N3 C A 19 -12.209 13.150 3.806 1.00 49.31 N
ATOM 18 C4 C A 19 -10.919 13.284 4.117 1.00 47.89 C
ATOM 19 N4 C A 19 -10.528 12.920 5.343 1.00 49.40 N
ATOM 20 C5 C A 19 -9.970 13.798 3.185 1.00 44.42 C
ATOM 21 C6 C A 19 -10.418 14.147 1.975 1.00 43.78 C
ATOM 22 P A A 20 -13.318 19.158 0.387 1.00 49.81 P
ATOM 23 OP1 A A 20 -13.910 20.147 -0.542 1.00 43.62 O
ATOM 24 OP2 A A 20 -12.176 19.545 1.246 1.00 49.76 O
ATOM 25 O5' A A 20 -14.489 18.584 1.313 1.00 44.69 O
TER
ATOM 1 O3' C B 19 -12.880 17.881 -0.473 1.00 45.28 O
ATOM 2 P A B 20 -13.318 19.158 0.387 1.00 49.81 P
ATOM 3 OP1 A B 20 -13.910 20.147 -0.542 1.00 43.62 O
ATOM 4 OP2 A B 20 -12.176 19.545 1.246 1.00 49.76 O
ATOM 5 O5' A B 20 -14.489 18.584 1.313 1.00 44.69 O
ATOM 6 C5' A B 20 -15.693 18.114 0.726 1.00 45.65 C
ATOM 7 C4' A B 20 -16.509 17.336 1.742 1.00 50.17 C
ATOM 8 O4' A B 20 -15.726 16.231 2.259 1.00 48.68 O
ATOM 9 C3' A B 20 -16.901 18.116 2.985 1.00 48.75 C
ATOM 10 O3' A B 20 -18.058 18.898 2.731 1.00 48.82 O
ATOM 11 C2' A B 20 -17.206 16.979 3.952 1.00 50.73 C
ATOM 12 O2' A B 20 -18.493 16.437 3.736 1.00 53.96 O
ATOM 13 C1' A B 20 -16.140 15.948 3.584 1.00 50.89 C
ATOM 14 N9 A B 20 -14.972 15.974 4.461 1.00 49.70 N
ATOM 15 C8 A B 20 -13.675 16.228 4.112 1.00 49.12 C
ATOM 16 N7 A B 20 -12.835 16.184 5.121 1.00 49.41 N
ATOM 17 C5 A B 20 -13.639 15.882 6.208 1.00 51.48 C
ATOM 18 C6 A B 20 -13.358 15.695 7.576 1.00 49.59 C
ATOM 19 N6 A B 20 -12.130 15.791 8.096 1.00 48.35 N
ATOM 20 N1 A B 20 -14.391 15.404 8.393 1.00 53.60 N
ATOM 21 C2 A B 20 -15.619 15.308 7.872 1.00 54.77 C
ATOM 22 N3 A B 20 -16.006 15.462 6.607 1.00 54.34 N
ATOM 23 C4 A B 20 -14.959 15.750 5.819 1.00 53.14 C
ATOM 24 P C B 21 -18.051 20.465 3.056 1.00 53.52 P
ATOM 25 OP1 C B 21 -19.424 20.974 2.845 1.00 56.53 O
ATOM 26 OP2 C B 21 -16.919 21.076 2.323 1.00 53.50 O
ATOM 27 O5' C B 21 -17.740 20.513 4.624 1.00 51.15 O
TER
ATOM 2 P C A 19 -7.459 17.091 -1.700 1.00 40.70 P
ATOM 3 OP1 C A 19 -6.476 16.186 -2.338 1.00 39.84 O
ATOM 4 OP2 C A 19 -7.935 18.286 -2.428 1.00 34.33 O
ATOM 5 O5' C A 19 -8.741 16.238 -1.259 1.00 42.50 O
ATOM 6 C5' C A 19 -9.780 16.890 -0.532 1.00 45.60 C
ATOM 7 C4' C A 19 -11.134 16.239 -0.750 1.00 43.60 C
ATOM 8 O4' C A 19 -11.052 14.821 -0.454 1.00 41.20 O
ATOM 9 C3' C A 19 -12.234 16.780 0.152 1.00 42.33 C
ATOM 10 O3' C A 19 -12.880 17.881 -0.473 1.00 45.28 O
ATOM 11 C2' C A 19 -13.170 15.582 0.271 1.00 45.60 C
ATOM 12 O2' C A 19 -14.043 15.469 -0.835 1.00 47.00 O
ATOM 13 C1' C A 19 -12.189 14.414 0.285 1.00 42.22 C
ATOM 14 N1 C A 19 -11.735 14.016 1.648 1.00 46.42 N
ATOM 15 C2 C A 19 -12.653 13.506 2.576 1.00 48.18 C
ATOM 16 O2 C A 19 -13.843 13.395 2.257 1.00 46.20 O
ATOM 17 N3 C A 19 -12.209 13.150 3.806 1.00 49.31 N
ATOM 18 C4 C A 19 -10.919 13.284 4.117 1.00 47.89 C
ATOM 19 N4 C A 19 -10.528 12.920 5.343 1.00 49.40 N
ATOM 20 C5 C A 19 -9.970 13.798 3.185 1.00 44.42 C
ATOM 21 C6 C A 19 -10.418 14.147 1.975 1.00 43.78 C
ATOM 22 P A A 20 -13.318 19.158 0.387 1.00 49.81 P
ATOM 23 OP1 A A 20 -13.910 20.147 -0.542 1.00 43.62 O
ATOM 24 OP2 A A 20 -12.176 19.545 1.246 1.00 49.76 O
ATOM 25 O5' A A 20 -14.489 18.584 1.313 1.00 44.69 O
TER
ATOM 1 O3' C B 19 -12.880 17.881 -0.473 1.00 45.28 O
ATOM 2 P A B 20 -13.318 19.158 0.387 1.00 49.81 P
ATOM 3 OP1 A B 20 -13.910 20.147 -0.542 1.00 43.62 O
ATOM 4 OP2 A B 20 -12.176 19.545 1.246 1.00 49.76 O
ATOM 5 O5' A B 20 -14.489 18.584 1.313 1.00 44.69 O
ATOM 6 C5' A B 20 -15.693 18.114 0.726 1.00 45.65 C
ATOM 7 C4' A B 20 -16.509 17.336 1.742 1.00 50.17 C
ATOM 8 O4' A B 20 -15.726 16.231 2.259 1.00 48.68 O
ATOM 9 C3' A B 20 -16.901 18.116 2.985 1.00 48.75 C
ATOM 10 O3' A B 20 -18.058 18.898 2.731 1.00 48.82 O
ATOM 11 C2' A B 20 -17.206 16.979 3.952 1.00 50.73 C
ATOM 12 O2' A B 20 -18.493 16.437 3.736 1.00 53.96 O
ATOM 13 C1' A B 20 -16.140 15.948 3.584 1.00 50.89 C
ATOM 14 N9 A B 20 -14.972 15.974 4.461 1.00 49.70 N
ATOM 15 C8 A B 20 -13.675 16.228 4.112 1.00 49.12 C
ATOM 16 N7 A B 20 -12.835 16.184 5.121 1.00 49.41 N
ATOM 17 C5 A B 20 -13.639 15.882 6.208 1.00 51.48 C
ATOM 18 C6 A B 20 -13.358 15.695 7.576 1.00 49.59 C
ATOM 19 N6 A B 20 -12.130 15.791 8.096 1.00 48.35 N
ATOM 20 N1 A B 20 -14.391 15.404 8.393 1.00 53.60 N
ATOM 21 C2 A B 20 -15.619 15.308 7.872 1.00 54.77 C
ATOM 22 N3 A B 20 -16.006 15.462 6.607 1.00 54.34 N
ATOM 23 C4 A B 20 -14.959 15.750 5.819 1.00 53.14 C
ATOM 24 P C B 21 -18.051 20.465 3.056 1.00 53.52 P
ATOM 25 OP1 C B 21 -19.424 20.974 2.845 1.00 56.53 O
ATOM 26 OP2 C B 21 -16.919 21.076 2.323 1.00 53.50 O
ATOM 27 O5' C B 21 -17.740 20.513 4.624 1.00 51.15 O
TER
Atoms:
C2: (-12.653,13.506,2.576)
OP1: (-6.476,16.186,-2.338)
OP2: (-7.935,18.286,-2.428)
C4: (-10.919,13.284,4.117)
O5': (-8.741,16.238,-1.259)
C3': (-12.234,16.780,0.152)
C1': (-12.189,14.414,0.285)
O4': (-11.052,14.821,-0.454)
C5': (-9.780,16.890,-0.532)
P: (-7.459,17.091,-1.700)
O2: (-13.843,13.395,2.257)
C4': (-11.134,16.239,-0.750)
C2': (-13.170,15.582,0.271)
O2': (-14.043,15.469,-0.835)
N1: (-11.735,14.016,1.648)
N3: (-12.209,13.150,3.806)
N4: (-10.528,12.920,5.343)
C6: (-10.418,14.147,1.975)
C5: (-9.970,13.798,3.185)
O3': (-12.880,17.881,-0.473)
OP1: (-6.476,16.186,-2.338)
OP2: (-7.935,18.286,-2.428)
C4: (-10.919,13.284,4.117)
O5': (-8.741,16.238,-1.259)
C3': (-12.234,16.780,0.152)
C1': (-12.189,14.414,0.285)
O4': (-11.052,14.821,-0.454)
C5': (-9.780,16.890,-0.532)
P: (-7.459,17.091,-1.700)
O2: (-13.843,13.395,2.257)
C4': (-11.134,16.239,-0.750)
C2': (-13.170,15.582,0.271)
O2': (-14.043,15.469,-0.835)
N1: (-11.735,14.016,1.648)
N3: (-12.209,13.150,3.806)
N4: (-10.528,12.920,5.343)
C6: (-10.418,14.147,1.975)
C5: (-9.970,13.798,3.185)
O3': (-12.880,17.881,-0.473)
OP1: (-13.910,20.147,-0.542)
OP2: (-12.176,19.545,1.246)
C3': (-16.901,18.116,2.985)
C1': (-16.140,15.948,3.584)
C5': (-15.693,18.114,0.726)
O4': (-15.726,16.231,2.259)
C8: (-13.675,16.228,4.112)
O2': (-18.493,16.437,3.736)
C6: (-13.358,15.695,7.576)
C5: (-13.639,15.882,6.208)
C4: (-14.959,15.750,5.819)
P: (-13.318,19.158,0.387)
C4': (-16.509,17.336,1.742)
C2': (-17.206,16.979,3.952)
C2: (-15.619,15.308,7.872)
N1: (-14.391,15.404,8.393)
N3: (-16.006,15.462,6.607)
N6: (-12.130,15.791,8.096)
N7: (-12.835,16.184,5.121)
N9: (-14.972,15.974,4.461)
O5': (-14.489,18.584,1.313)
O3': (-18.058,18.898,2.731)
OP2: (-12.176,19.545,1.246)
C3': (-16.901,18.116,2.985)
C1': (-16.140,15.948,3.584)
C5': (-15.693,18.114,0.726)
O4': (-15.726,16.231,2.259)
C8: (-13.675,16.228,4.112)
O2': (-18.493,16.437,3.736)
C6: (-13.358,15.695,7.576)
C5: (-13.639,15.882,6.208)
C4: (-14.959,15.750,5.819)
P: (-13.318,19.158,0.387)
C4': (-16.509,17.336,1.742)
C2': (-17.206,16.979,3.952)
C2: (-15.619,15.308,7.872)
N1: (-14.391,15.404,8.393)
N3: (-16.006,15.462,6.607)
N6: (-12.130,15.791,8.096)
N7: (-12.835,16.184,5.121)
N9: (-14.972,15.974,4.461)
O5': (-14.489,18.584,1.313)
O3': (-18.058,18.898,2.731)
Image (generated by PyMOL):