Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3HL2:E40:E39
Extra
PDB:
ATOM 1 O3' G A 39 40.071 -15.175 2.741 0.50116.29 O
ATOM 2 P C A 40 40.686 -16.213 1.690 0.50119.67 P
ATOM 3 OP1 C A 40 41.523 -15.452 0.735 0.50123.38 O
ATOM 4 OP2 C A 40 39.582 -17.063 1.190 0.50112.29 O
ATOM 5 O5' C A 40 41.659 -17.105 2.595 0.50113.94 O
ATOM 6 C5' C A 40 41.196 -18.338 3.135 0.50110.64 C
ATOM 7 C4' C A 40 42.344 -19.123 3.743 0.50104.23 C
ATOM 8 O4' C A 40 41.984 -19.540 5.085 0.50103.39 O
ATOM 9 C3' C A 40 42.709 -20.403 3.003 0.50103.75 C
ATOM 10 O3' C A 40 43.703 -20.132 2.024 0.50 98.39 O
ATOM 11 C2' C A 40 43.253 -21.280 4.125 0.50104.08 C
ATOM 12 O2' C A 40 44.597 -20.976 4.443 0.50103.67 O
ATOM 13 C1' C A 40 42.337 -20.896 5.282 0.50102.49 C
ATOM 14 N1 C A 40 41.087 -21.703 5.343 0.50 99.54 N
ATOM 15 C2 C A 40 41.092 -22.941 5.996 0.50100.53 C
ATOM 16 O2 C A 40 42.140 -23.345 6.513 0.50101.11 O
ATOM 17 N3 C A 40 39.945 -23.663 6.042 0.50101.59 N
ATOM 18 C4 C A 40 38.835 -23.191 5.471 0.50 99.04 C
ATOM 19 N4 C A 40 37.729 -23.939 5.543 0.50 95.50 N
ATOM 20 C5 C A 40 38.811 -21.932 4.802 0.50 97.50 C
ATOM 21 C6 C A 40 39.947 -21.229 4.763 0.50 97.58 C
ATOM 22 P U A 41 43.499 -20.633 0.518 0.50 95.42 P
ATOM 23 OP1 U A 41 44.255 -19.723 -0.371 0.50 91.26 O
ATOM 24 OP2 U A 41 42.050 -20.842 0.299 0.50100.25 O
ATOM 25 O5' U A 41 44.209 -22.067 0.518 0.50 95.85 O
TER
ATOM 1 O3' A B 38 35.245 -14.576 6.590 0.50105.44 O
ATOM 2 P G B 39 34.871 -15.103 5.126 0.50106.27 P
ATOM 3 OP1 G B 39 34.290 -13.971 4.370 0.50107.88 O
ATOM 4 OP2 G B 39 34.105 -16.360 5.277 0.50100.47 O
ATOM 5 O5' G B 39 36.298 -15.467 4.501 0.50103.51 O
ATOM 6 C5' G B 39 37.115 -14.442 3.949 0.50105.98 C
ATOM 7 C4' G B 39 38.532 -14.533 4.485 0.50108.08 C
ATOM 8 O4' G B 39 38.491 -14.802 5.910 0.50105.78 O
ATOM 9 C3' G B 39 39.374 -15.651 3.885 0.50110.11 C
ATOM 10 O3' G B 39 40.071 -15.175 2.741 0.50116.29 O
ATOM 11 C2' G B 39 40.331 -15.982 5.025 0.50104.81 C
ATOM 12 O2' G B 39 41.418 -15.080 5.094 0.50 97.21 O
ATOM 13 C1' G B 39 39.426 -15.810 6.241 0.50103.85 C
ATOM 14 N9 G B 39 38.692 -17.022 6.594 0.50101.29 N
ATOM 15 C8 G B 39 37.359 -17.274 6.376 0.50 99.14 C
ATOM 16 N7 G B 39 36.976 -18.446 6.799 0.50101.51 N
ATOM 17 C5 G B 39 38.128 -19.009 7.332 0.50 99.64 C
ATOM 18 C6 G B 39 38.330 -20.271 7.940 0.50 94.60 C
ATOM 19 O6 G B 39 37.501 -21.171 8.132 0.50 95.23 O
ATOM 20 N1 G B 39 39.652 -20.444 8.343 0.50 90.15 N
ATOM 21 C2 G B 39 40.652 -19.514 8.179 0.50 95.50 C
ATOM 22 N2 G B 39 41.865 -19.861 8.632 0.50 96.14 N
ATOM 23 N3 G B 39 40.476 -18.328 7.612 0.50100.71 N
ATOM 24 C4 G B 39 39.194 -18.144 7.214 0.50100.35 C
ATOM 25 P C B 40 40.686 -16.213 1.690 0.50119.67 P
ATOM 26 OP1 C B 40 41.523 -15.452 0.735 0.50123.38 O
ATOM 27 OP2 C B 40 39.582 -17.063 1.190 0.50112.29 O
ATOM 28 O5' C B 40 41.659 -17.105 2.595 0.50113.94 O
TER
ATOM 2 P C A 40 40.686 -16.213 1.690 0.50119.67 P
ATOM 3 OP1 C A 40 41.523 -15.452 0.735 0.50123.38 O
ATOM 4 OP2 C A 40 39.582 -17.063 1.190 0.50112.29 O
ATOM 5 O5' C A 40 41.659 -17.105 2.595 0.50113.94 O
ATOM 6 C5' C A 40 41.196 -18.338 3.135 0.50110.64 C
ATOM 7 C4' C A 40 42.344 -19.123 3.743 0.50104.23 C
ATOM 8 O4' C A 40 41.984 -19.540 5.085 0.50103.39 O
ATOM 9 C3' C A 40 42.709 -20.403 3.003 0.50103.75 C
ATOM 10 O3' C A 40 43.703 -20.132 2.024 0.50 98.39 O
ATOM 11 C2' C A 40 43.253 -21.280 4.125 0.50104.08 C
ATOM 12 O2' C A 40 44.597 -20.976 4.443 0.50103.67 O
ATOM 13 C1' C A 40 42.337 -20.896 5.282 0.50102.49 C
ATOM 14 N1 C A 40 41.087 -21.703 5.343 0.50 99.54 N
ATOM 15 C2 C A 40 41.092 -22.941 5.996 0.50100.53 C
ATOM 16 O2 C A 40 42.140 -23.345 6.513 0.50101.11 O
ATOM 17 N3 C A 40 39.945 -23.663 6.042 0.50101.59 N
ATOM 18 C4 C A 40 38.835 -23.191 5.471 0.50 99.04 C
ATOM 19 N4 C A 40 37.729 -23.939 5.543 0.50 95.50 N
ATOM 20 C5 C A 40 38.811 -21.932 4.802 0.50 97.50 C
ATOM 21 C6 C A 40 39.947 -21.229 4.763 0.50 97.58 C
ATOM 22 P U A 41 43.499 -20.633 0.518 0.50 95.42 P
ATOM 23 OP1 U A 41 44.255 -19.723 -0.371 0.50 91.26 O
ATOM 24 OP2 U A 41 42.050 -20.842 0.299 0.50100.25 O
ATOM 25 O5' U A 41 44.209 -22.067 0.518 0.50 95.85 O
TER
ATOM 1 O3' A B 38 35.245 -14.576 6.590 0.50105.44 O
ATOM 2 P G B 39 34.871 -15.103 5.126 0.50106.27 P
ATOM 3 OP1 G B 39 34.290 -13.971 4.370 0.50107.88 O
ATOM 4 OP2 G B 39 34.105 -16.360 5.277 0.50100.47 O
ATOM 5 O5' G B 39 36.298 -15.467 4.501 0.50103.51 O
ATOM 6 C5' G B 39 37.115 -14.442 3.949 0.50105.98 C
ATOM 7 C4' G B 39 38.532 -14.533 4.485 0.50108.08 C
ATOM 8 O4' G B 39 38.491 -14.802 5.910 0.50105.78 O
ATOM 9 C3' G B 39 39.374 -15.651 3.885 0.50110.11 C
ATOM 10 O3' G B 39 40.071 -15.175 2.741 0.50116.29 O
ATOM 11 C2' G B 39 40.331 -15.982 5.025 0.50104.81 C
ATOM 12 O2' G B 39 41.418 -15.080 5.094 0.50 97.21 O
ATOM 13 C1' G B 39 39.426 -15.810 6.241 0.50103.85 C
ATOM 14 N9 G B 39 38.692 -17.022 6.594 0.50101.29 N
ATOM 15 C8 G B 39 37.359 -17.274 6.376 0.50 99.14 C
ATOM 16 N7 G B 39 36.976 -18.446 6.799 0.50101.51 N
ATOM 17 C5 G B 39 38.128 -19.009 7.332 0.50 99.64 C
ATOM 18 C6 G B 39 38.330 -20.271 7.940 0.50 94.60 C
ATOM 19 O6 G B 39 37.501 -21.171 8.132 0.50 95.23 O
ATOM 20 N1 G B 39 39.652 -20.444 8.343 0.50 90.15 N
ATOM 21 C2 G B 39 40.652 -19.514 8.179 0.50 95.50 C
ATOM 22 N2 G B 39 41.865 -19.861 8.632 0.50 96.14 N
ATOM 23 N3 G B 39 40.476 -18.328 7.612 0.50100.71 N
ATOM 24 C4 G B 39 39.194 -18.144 7.214 0.50100.35 C
ATOM 25 P C B 40 40.686 -16.213 1.690 0.50119.67 P
ATOM 26 OP1 C B 40 41.523 -15.452 0.735 0.50123.38 O
ATOM 27 OP2 C B 40 39.582 -17.063 1.190 0.50112.29 O
ATOM 28 O5' C B 40 41.659 -17.105 2.595 0.50113.94 O
TER
Atoms:
C2: (41.092,-22.941,5.996)
OP1: (41.523,-15.452,0.735)
OP2: (39.582,-17.063,1.190)
C4: (38.835,-23.191,5.471)
O5': (41.659,-17.105,2.595)
C3': (42.709,-20.403,3.003)
C1': (42.337,-20.896,5.282)
O4': (41.984,-19.540,5.085)
C5': (41.196,-18.338,3.135)
P: (40.686,-16.213,1.690)
O2: (42.140,-23.345,6.513)
C4': (42.344,-19.123,3.743)
C2': (43.253,-21.280,4.125)
O2': (44.597,-20.976,4.443)
N1: (41.087,-21.703,5.343)
N3: (39.945,-23.663,6.042)
N4: (37.729,-23.939,5.543)
C6: (39.947,-21.229,4.763)
C5: (38.811,-21.932,4.802)
O3': (43.703,-20.132,2.024)
OP1: (41.523,-15.452,0.735)
OP2: (39.582,-17.063,1.190)
C4: (38.835,-23.191,5.471)
O5': (41.659,-17.105,2.595)
C3': (42.709,-20.403,3.003)
C1': (42.337,-20.896,5.282)
O4': (41.984,-19.540,5.085)
C5': (41.196,-18.338,3.135)
P: (40.686,-16.213,1.690)
O2: (42.140,-23.345,6.513)
C4': (42.344,-19.123,3.743)
C2': (43.253,-21.280,4.125)
O2': (44.597,-20.976,4.443)
N1: (41.087,-21.703,5.343)
N3: (39.945,-23.663,6.042)
N4: (37.729,-23.939,5.543)
C6: (39.947,-21.229,4.763)
C5: (38.811,-21.932,4.802)
O3': (43.703,-20.132,2.024)
OP1: (34.290,-13.971,4.370)
OP2: (34.105,-16.360,5.277)
C3': (39.374,-15.651,3.885)
C1': (39.426,-15.810,6.241)
C5': (37.115,-14.442,3.949)
O6: (37.501,-21.171,8.132)
O4': (38.491,-14.802,5.910)
C8: (37.359,-17.274,6.376)
C2: (40.652,-19.514,8.179)
C6: (38.330,-20.271,7.940)
C5: (38.128,-19.009,7.332)
C4: (39.194,-18.144,7.214)
P: (34.871,-15.103,5.126)
C4': (38.532,-14.533,4.485)
C2': (40.331,-15.982,5.025)
O2': (41.418,-15.080,5.094)
N1: (39.652,-20.444,8.343)
N2: (41.865,-19.861,8.632)
N3: (40.476,-18.328,7.612)
N7: (36.976,-18.446,6.799)
N9: (38.692,-17.022,6.594)
O5': (36.298,-15.467,4.501)
O3': (40.071,-15.175,2.741)
OP2: (34.105,-16.360,5.277)
C3': (39.374,-15.651,3.885)
C1': (39.426,-15.810,6.241)
C5': (37.115,-14.442,3.949)
O6: (37.501,-21.171,8.132)
O4': (38.491,-14.802,5.910)
C8: (37.359,-17.274,6.376)
C2: (40.652,-19.514,8.179)
C6: (38.330,-20.271,7.940)
C5: (38.128,-19.009,7.332)
C4: (39.194,-18.144,7.214)
P: (34.871,-15.103,5.126)
C4': (38.532,-14.533,4.485)
C2': (40.331,-15.982,5.025)
O2': (41.418,-15.080,5.094)
N1: (39.652,-20.444,8.343)
N2: (41.865,-19.861,8.632)
N3: (40.476,-18.328,7.612)
N7: (36.976,-18.446,6.799)
N9: (38.692,-17.022,6.594)
O5': (36.298,-15.467,4.501)
O3': (40.071,-15.175,2.741)
Image (generated by PyMOL):