Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2357:A2356
Extra
PDB:
ATOM 1 O3' G A2356 -126.229 -57.057 38.376 1.00 0.01 O
ATOM 2 P C A2357 -127.446 -56.890 39.388 1.00 0.01 P
ATOM 3 OP1 C A2357 -128.338 -55.861 38.817 1.00 0.01 O
ATOM 4 OP2 C A2357 -126.896 -56.693 40.732 1.00 0.01 O
ATOM 5 O5' C A2357 -128.134 -58.303 39.320 1.00 0.01 O
ATOM 6 C5' C A2357 -128.850 -58.696 38.186 1.00 0.01 C
ATOM 7 C4' C A2357 -129.456 -60.036 38.401 1.00 0.01 C
ATOM 8 O4' C A2357 -128.420 -60.976 38.680 1.00 0.01 O
ATOM 9 C3' C A2357 -130.342 -60.186 39.605 1.00 0.01 C
ATOM 10 O3' C A2357 -131.599 -59.582 39.467 1.00 0.01 O
ATOM 11 C2' C A2357 -130.386 -61.689 39.759 1.00 0.01 C
ATOM 12 O2' C A2357 -131.212 -62.296 38.785 1.00 0.01 O
ATOM 13 C1' C A2357 -128.946 -62.026 39.446 1.00 0.01 C
ATOM 14 N1 C A2357 -128.180 -62.127 40.632 1.00 0.01 N
ATOM 15 C2 C A2357 -128.423 -63.260 41.318 1.00 0.01 C
ATOM 16 O2 C A2357 -129.236 -64.011 40.808 1.00 0.01 O
ATOM 17 N3 C A2357 -127.799 -63.477 42.449 1.00 0.01 N
ATOM 18 C4 C A2357 -126.958 -62.545 42.874 1.00 0.01 C
ATOM 19 N4 C A2357 -126.310 -62.766 44.027 1.00 0.01 N
ATOM 20 C5 C A2357 -126.701 -61.337 42.167 1.00 0.01 C
ATOM 21 C6 C A2357 -127.348 -61.167 41.025 1.00 0.01 C
ATOM 22 P G A2358 -132.278 -58.906 40.728 1.00 0.01 P
ATOM 23 OP1 G A2358 -133.561 -58.383 40.286 1.00 0.01 O
ATOM 24 OP2 G A2358 -131.311 -57.982 41.291 1.00 0.01 O
ATOM 25 O5' G A2358 -132.484 -60.153 41.700 1.00 0.01 O
TER
ATOM 1 O3' C B2355 -120.401 -55.876 39.680 1.00 0.01 O
ATOM 2 P G B2356 -121.667 -55.751 40.649 1.00 0.01 P
ATOM 3 OP1 G B2356 -122.091 -54.338 40.601 1.00 0.01 O
ATOM 4 OP2 G B2356 -121.273 -56.354 41.948 1.00 0.01 O
ATOM 5 O5' G B2356 -122.755 -56.666 39.944 1.00 0.01 O
ATOM 6 C5' G B2356 -123.176 -56.378 38.637 1.00 0.01 C
ATOM 7 C4' G B2356 -123.876 -57.538 38.038 1.00 0.01 C
ATOM 8 O4' G B2356 -123.073 -58.723 38.189 1.00 0.01 O
ATOM 9 C3' G B2356 -125.166 -57.922 38.699 1.00 0.01 C
ATOM 10 O3' G B2356 -126.229 -57.057 38.376 1.00 0.01 O
ATOM 11 C2' G B2356 -125.347 -59.355 38.212 1.00 0.01 C
ATOM 12 O2' G B2356 -125.757 -59.388 36.855 1.00 0.01 O
ATOM 13 C1' G B2356 -123.916 -59.854 38.280 1.00 0.01 C
ATOM 14 N9 G B2356 -123.622 -60.581 39.534 1.00 0.01 N
ATOM 15 C8 G B2356 -122.813 -60.203 40.560 1.00 0.01 C
ATOM 16 N7 G B2356 -122.724 -61.090 41.506 1.00 0.01 N
ATOM 17 C5 G B2356 -123.506 -62.124 41.074 1.00 0.01 C
ATOM 18 C6 G B2356 -123.794 -63.354 41.676 1.00 0.01 C
ATOM 19 O6 G B2356 -123.425 -63.803 42.746 1.00 0.01 O
ATOM 20 N1 G B2356 -124.638 -64.116 40.911 1.00 0.01 N
ATOM 21 C2 G B2356 -125.142 -63.744 39.704 1.00 0.01 C
ATOM 22 N2 G B2356 -125.955 -64.625 39.111 1.00 0.01 N
ATOM 23 N3 G B2356 -124.873 -62.589 39.122 1.00 0.01 N
ATOM 24 C4 G B2356 -124.056 -61.832 39.865 1.00 0.01 C
ATOM 25 P C B2357 -127.446 -56.890 39.388 1.00 0.01 P
ATOM 26 OP1 C B2357 -128.338 -55.861 38.817 1.00 0.01 O
ATOM 27 OP2 C B2357 -126.896 -56.693 40.732 1.00 0.01 O
ATOM 28 O5' C B2357 -128.134 -58.303 39.320 1.00 0.01 O
TER
ATOM 2 P C A2357 -127.446 -56.890 39.388 1.00 0.01 P
ATOM 3 OP1 C A2357 -128.338 -55.861 38.817 1.00 0.01 O
ATOM 4 OP2 C A2357 -126.896 -56.693 40.732 1.00 0.01 O
ATOM 5 O5' C A2357 -128.134 -58.303 39.320 1.00 0.01 O
ATOM 6 C5' C A2357 -128.850 -58.696 38.186 1.00 0.01 C
ATOM 7 C4' C A2357 -129.456 -60.036 38.401 1.00 0.01 C
ATOM 8 O4' C A2357 -128.420 -60.976 38.680 1.00 0.01 O
ATOM 9 C3' C A2357 -130.342 -60.186 39.605 1.00 0.01 C
ATOM 10 O3' C A2357 -131.599 -59.582 39.467 1.00 0.01 O
ATOM 11 C2' C A2357 -130.386 -61.689 39.759 1.00 0.01 C
ATOM 12 O2' C A2357 -131.212 -62.296 38.785 1.00 0.01 O
ATOM 13 C1' C A2357 -128.946 -62.026 39.446 1.00 0.01 C
ATOM 14 N1 C A2357 -128.180 -62.127 40.632 1.00 0.01 N
ATOM 15 C2 C A2357 -128.423 -63.260 41.318 1.00 0.01 C
ATOM 16 O2 C A2357 -129.236 -64.011 40.808 1.00 0.01 O
ATOM 17 N3 C A2357 -127.799 -63.477 42.449 1.00 0.01 N
ATOM 18 C4 C A2357 -126.958 -62.545 42.874 1.00 0.01 C
ATOM 19 N4 C A2357 -126.310 -62.766 44.027 1.00 0.01 N
ATOM 20 C5 C A2357 -126.701 -61.337 42.167 1.00 0.01 C
ATOM 21 C6 C A2357 -127.348 -61.167 41.025 1.00 0.01 C
ATOM 22 P G A2358 -132.278 -58.906 40.728 1.00 0.01 P
ATOM 23 OP1 G A2358 -133.561 -58.383 40.286 1.00 0.01 O
ATOM 24 OP2 G A2358 -131.311 -57.982 41.291 1.00 0.01 O
ATOM 25 O5' G A2358 -132.484 -60.153 41.700 1.00 0.01 O
TER
ATOM 1 O3' C B2355 -120.401 -55.876 39.680 1.00 0.01 O
ATOM 2 P G B2356 -121.667 -55.751 40.649 1.00 0.01 P
ATOM 3 OP1 G B2356 -122.091 -54.338 40.601 1.00 0.01 O
ATOM 4 OP2 G B2356 -121.273 -56.354 41.948 1.00 0.01 O
ATOM 5 O5' G B2356 -122.755 -56.666 39.944 1.00 0.01 O
ATOM 6 C5' G B2356 -123.176 -56.378 38.637 1.00 0.01 C
ATOM 7 C4' G B2356 -123.876 -57.538 38.038 1.00 0.01 C
ATOM 8 O4' G B2356 -123.073 -58.723 38.189 1.00 0.01 O
ATOM 9 C3' G B2356 -125.166 -57.922 38.699 1.00 0.01 C
ATOM 10 O3' G B2356 -126.229 -57.057 38.376 1.00 0.01 O
ATOM 11 C2' G B2356 -125.347 -59.355 38.212 1.00 0.01 C
ATOM 12 O2' G B2356 -125.757 -59.388 36.855 1.00 0.01 O
ATOM 13 C1' G B2356 -123.916 -59.854 38.280 1.00 0.01 C
ATOM 14 N9 G B2356 -123.622 -60.581 39.534 1.00 0.01 N
ATOM 15 C8 G B2356 -122.813 -60.203 40.560 1.00 0.01 C
ATOM 16 N7 G B2356 -122.724 -61.090 41.506 1.00 0.01 N
ATOM 17 C5 G B2356 -123.506 -62.124 41.074 1.00 0.01 C
ATOM 18 C6 G B2356 -123.794 -63.354 41.676 1.00 0.01 C
ATOM 19 O6 G B2356 -123.425 -63.803 42.746 1.00 0.01 O
ATOM 20 N1 G B2356 -124.638 -64.116 40.911 1.00 0.01 N
ATOM 21 C2 G B2356 -125.142 -63.744 39.704 1.00 0.01 C
ATOM 22 N2 G B2356 -125.955 -64.625 39.111 1.00 0.01 N
ATOM 23 N3 G B2356 -124.873 -62.589 39.122 1.00 0.01 N
ATOM 24 C4 G B2356 -124.056 -61.832 39.865 1.00 0.01 C
ATOM 25 P C B2357 -127.446 -56.890 39.388 1.00 0.01 P
ATOM 26 OP1 C B2357 -128.338 -55.861 38.817 1.00 0.01 O
ATOM 27 OP2 C B2357 -126.896 -56.693 40.732 1.00 0.01 O
ATOM 28 O5' C B2357 -128.134 -58.303 39.320 1.00 0.01 O
TER
Atoms:
C2: (-128.423,-63.260,41.318)
OP1: (-128.338,-55.861,38.817)
OP2: (-126.896,-56.693,40.732)
C4: (-126.958,-62.545,42.874)
O5': (-128.134,-58.303,39.320)
C3': (-130.342,-60.186,39.605)
C1': (-128.946,-62.026,39.446)
O4': (-128.420,-60.976,38.680)
C5': (-128.850,-58.696,38.186)
P: (-127.446,-56.890,39.388)
O2: (-129.236,-64.011,40.808)
C4': (-129.456,-60.036,38.401)
C2': (-130.386,-61.689,39.759)
O2': (-131.212,-62.296,38.785)
N1: (-128.180,-62.127,40.632)
N3: (-127.799,-63.477,42.449)
N4: (-126.310,-62.766,44.027)
C6: (-127.348,-61.167,41.025)
C5: (-126.701,-61.337,42.167)
O3': (-131.599,-59.582,39.467)
OP1: (-128.338,-55.861,38.817)
OP2: (-126.896,-56.693,40.732)
C4: (-126.958,-62.545,42.874)
O5': (-128.134,-58.303,39.320)
C3': (-130.342,-60.186,39.605)
C1': (-128.946,-62.026,39.446)
O4': (-128.420,-60.976,38.680)
C5': (-128.850,-58.696,38.186)
P: (-127.446,-56.890,39.388)
O2: (-129.236,-64.011,40.808)
C4': (-129.456,-60.036,38.401)
C2': (-130.386,-61.689,39.759)
O2': (-131.212,-62.296,38.785)
N1: (-128.180,-62.127,40.632)
N3: (-127.799,-63.477,42.449)
N4: (-126.310,-62.766,44.027)
C6: (-127.348,-61.167,41.025)
C5: (-126.701,-61.337,42.167)
O3': (-131.599,-59.582,39.467)
OP1: (-122.091,-54.338,40.601)
OP2: (-121.273,-56.354,41.948)
C3': (-125.166,-57.922,38.699)
C1': (-123.916,-59.854,38.280)
C5': (-123.176,-56.378,38.637)
O6: (-123.425,-63.803,42.746)
O4': (-123.073,-58.723,38.189)
C8: (-122.813,-60.203,40.560)
C2: (-125.142,-63.744,39.704)
C6: (-123.794,-63.354,41.676)
C5: (-123.506,-62.124,41.074)
C4: (-124.056,-61.832,39.865)
P: (-121.667,-55.751,40.649)
C4': (-123.876,-57.538,38.038)
C2': (-125.347,-59.355,38.212)
O2': (-125.757,-59.388,36.855)
N1: (-124.638,-64.116,40.911)
N2: (-125.955,-64.625,39.111)
N3: (-124.873,-62.589,39.122)
N7: (-122.724,-61.090,41.506)
N9: (-123.622,-60.581,39.534)
O5': (-122.755,-56.666,39.944)
O3': (-126.229,-57.057,38.376)
OP2: (-121.273,-56.354,41.948)
C3': (-125.166,-57.922,38.699)
C1': (-123.916,-59.854,38.280)
C5': (-123.176,-56.378,38.637)
O6: (-123.425,-63.803,42.746)
O4': (-123.073,-58.723,38.189)
C8: (-122.813,-60.203,40.560)
C2: (-125.142,-63.744,39.704)
C6: (-123.794,-63.354,41.676)
C5: (-123.506,-62.124,41.074)
C4: (-124.056,-61.832,39.865)
P: (-121.667,-55.751,40.649)
C4': (-123.876,-57.538,38.038)
C2': (-125.347,-59.355,38.212)
O2': (-125.757,-59.388,36.855)
N1: (-124.638,-64.116,40.911)
N2: (-125.955,-64.625,39.111)
N3: (-124.873,-62.589,39.122)
N7: (-122.724,-61.090,41.506)
N9: (-123.622,-60.581,39.534)
O5': (-122.755,-56.666,39.944)
O3': (-126.229,-57.057,38.376)
Image (generated by PyMOL):