Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1962:A1924
Extra
PDB:
ATOM 1 O3' G A1961 -76.473 -13.004 5.620 1.00 0.01 O
ATOM 2 P A A1962 -77.378 -12.718 6.906 1.00 0.01 P
ATOM 3 OP1 A A1962 -76.663 -13.248 8.080 1.00 0.01 O
ATOM 4 OP2 A A1962 -78.721 -13.232 6.619 1.00 0.01 O
ATOM 5 O5' A A1962 -77.409 -11.136 6.972 1.00 0.01 O
ATOM 6 C5' A A1962 -76.465 -10.440 7.765 1.00 0.01 C
ATOM 7 C4' A A1962 -75.122 -10.405 7.090 1.00 0.01 C
ATOM 8 O4' A A1962 -75.278 -9.856 5.774 1.00 0.01 O
ATOM 9 C3' A A1962 -74.061 -9.543 7.755 1.00 0.01 C
ATOM 10 O3' A A1962 -73.319 -10.256 8.724 1.00 0.01 O
ATOM 11 C2' A A1962 -73.200 -9.096 6.602 1.00 0.01 C
ATOM 12 O2' A A1962 -72.198 -10.045 6.374 1.00 0.01 O
ATOM 13 C1' A A1962 -74.157 -9.115 5.420 1.00 0.01 C
ATOM 14 N9 A A1962 -74.594 -7.782 5.051 1.00 0.12 N
ATOM 15 C8 A A1962 -75.820 -7.217 5.193 1.00 0.12 C
ATOM 16 N7 A A1962 -75.882 -5.984 4.747 1.00 0.12 N
ATOM 17 C5 A A1962 -74.607 -5.744 4.274 1.00 0.12 C
ATOM 18 C6 A A1962 -74.000 -4.637 3.685 1.00 0.12 C
ATOM 19 N6 A A1962 -74.600 -3.488 3.436 1.00 0.12 N
ATOM 20 N1 A A1962 -72.712 -4.744 3.340 1.00 0.12 N
ATOM 21 C2 A A1962 -72.064 -5.890 3.567 1.00 0.12 C
ATOM 22 N3 A A1962 -72.519 -7.012 4.119 1.00 0.12 N
ATOM 23 C4 A A1962 -73.809 -6.858 4.453 1.00 0.12 C
ATOM 24 P A A1963 -73.478 -9.935 10.288 1.00 0.01 P
ATOM 25 OP1 A A1963 -73.871 -11.199 10.970 1.00 0.01 O
ATOM 26 OP2 A A1963 -74.343 -8.784 10.413 1.00 0.01 O
ATOM 27 O5' A A1963 -72.015 -9.527 10.702 1.00 0.01 O
TER
ATOM 1 O3' G B1923 -84.743 -6.247 2.138 1.00 14.03 O
ATOM 2 P U B1924 -84.547 -5.765 0.622 1.00 13.59 P
ATOM 3 OP1 U B1924 -85.785 -6.128 -0.112 1.00 13.59 O
ATOM 4 OP2 U B1924 -83.243 -6.337 0.133 1.00 13.59 O
ATOM 5 O5' U B1924 -84.462 -4.168 0.760 1.00 13.59 O
ATOM 6 C5' U B1924 -83.944 -3.550 1.913 1.00 13.59 C
ATOM 7 C4' U B1924 -82.778 -2.644 1.587 1.00 13.59 C
ATOM 8 O4' U B1924 -81.936 -2.542 2.755 1.00 13.59 O
ATOM 9 C3' U B1924 -81.848 -3.110 0.465 1.00 13.59 C
ATOM 10 O3' U B1924 -82.194 -2.576 -0.801 1.00 13.59 O
ATOM 11 C2' U B1924 -80.462 -2.678 0.930 1.00 13.59 C
ATOM 12 O2' U B1924 -80.201 -1.326 0.589 1.00 13.59 O
ATOM 13 C1' U B1924 -80.594 -2.763 2.427 1.00 13.59 C
ATOM 14 N1 U B1924 -80.203 -4.071 2.964 1.00 13.70 N
ATOM 15 C2 U B1924 -78.897 -4.278 3.276 1.00 13.70 C
ATOM 16 O2 U B1924 -78.072 -3.435 3.038 1.00 13.70 O
ATOM 17 N3 U B1924 -78.604 -5.487 3.840 1.00 13.70 N
ATOM 18 C4 U B1924 -79.497 -6.483 4.142 1.00 13.70 C
ATOM 19 O4 U B1924 -79.130 -7.524 4.669 1.00 13.70 O
ATOM 20 C5 U B1924 -80.842 -6.193 3.806 1.00 13.70 C
ATOM 21 C6 U B1924 -81.141 -5.017 3.254 1.00 13.70 C
ATOM 22 P A B1925 -81.407 -3.046 -2.141 1.00 10.68 P
ATOM 23 OP1 A B1925 -81.738 -2.069 -3.213 1.00 10.68 O
ATOM 24 OP2 A B1925 -81.731 -4.483 -2.362 1.00 10.68 O
ATOM 25 O5' A B1925 -79.881 -2.899 -1.739 1.00 10.68 O
TER
ATOM 2 P A A1962 -77.378 -12.718 6.906 1.00 0.01 P
ATOM 3 OP1 A A1962 -76.663 -13.248 8.080 1.00 0.01 O
ATOM 4 OP2 A A1962 -78.721 -13.232 6.619 1.00 0.01 O
ATOM 5 O5' A A1962 -77.409 -11.136 6.972 1.00 0.01 O
ATOM 6 C5' A A1962 -76.465 -10.440 7.765 1.00 0.01 C
ATOM 7 C4' A A1962 -75.122 -10.405 7.090 1.00 0.01 C
ATOM 8 O4' A A1962 -75.278 -9.856 5.774 1.00 0.01 O
ATOM 9 C3' A A1962 -74.061 -9.543 7.755 1.00 0.01 C
ATOM 10 O3' A A1962 -73.319 -10.256 8.724 1.00 0.01 O
ATOM 11 C2' A A1962 -73.200 -9.096 6.602 1.00 0.01 C
ATOM 12 O2' A A1962 -72.198 -10.045 6.374 1.00 0.01 O
ATOM 13 C1' A A1962 -74.157 -9.115 5.420 1.00 0.01 C
ATOM 14 N9 A A1962 -74.594 -7.782 5.051 1.00 0.12 N
ATOM 15 C8 A A1962 -75.820 -7.217 5.193 1.00 0.12 C
ATOM 16 N7 A A1962 -75.882 -5.984 4.747 1.00 0.12 N
ATOM 17 C5 A A1962 -74.607 -5.744 4.274 1.00 0.12 C
ATOM 18 C6 A A1962 -74.000 -4.637 3.685 1.00 0.12 C
ATOM 19 N6 A A1962 -74.600 -3.488 3.436 1.00 0.12 N
ATOM 20 N1 A A1962 -72.712 -4.744 3.340 1.00 0.12 N
ATOM 21 C2 A A1962 -72.064 -5.890 3.567 1.00 0.12 C
ATOM 22 N3 A A1962 -72.519 -7.012 4.119 1.00 0.12 N
ATOM 23 C4 A A1962 -73.809 -6.858 4.453 1.00 0.12 C
ATOM 24 P A A1963 -73.478 -9.935 10.288 1.00 0.01 P
ATOM 25 OP1 A A1963 -73.871 -11.199 10.970 1.00 0.01 O
ATOM 26 OP2 A A1963 -74.343 -8.784 10.413 1.00 0.01 O
ATOM 27 O5' A A1963 -72.015 -9.527 10.702 1.00 0.01 O
TER
ATOM 1 O3' G B1923 -84.743 -6.247 2.138 1.00 14.03 O
ATOM 2 P U B1924 -84.547 -5.765 0.622 1.00 13.59 P
ATOM 3 OP1 U B1924 -85.785 -6.128 -0.112 1.00 13.59 O
ATOM 4 OP2 U B1924 -83.243 -6.337 0.133 1.00 13.59 O
ATOM 5 O5' U B1924 -84.462 -4.168 0.760 1.00 13.59 O
ATOM 6 C5' U B1924 -83.944 -3.550 1.913 1.00 13.59 C
ATOM 7 C4' U B1924 -82.778 -2.644 1.587 1.00 13.59 C
ATOM 8 O4' U B1924 -81.936 -2.542 2.755 1.00 13.59 O
ATOM 9 C3' U B1924 -81.848 -3.110 0.465 1.00 13.59 C
ATOM 10 O3' U B1924 -82.194 -2.576 -0.801 1.00 13.59 O
ATOM 11 C2' U B1924 -80.462 -2.678 0.930 1.00 13.59 C
ATOM 12 O2' U B1924 -80.201 -1.326 0.589 1.00 13.59 O
ATOM 13 C1' U B1924 -80.594 -2.763 2.427 1.00 13.59 C
ATOM 14 N1 U B1924 -80.203 -4.071 2.964 1.00 13.70 N
ATOM 15 C2 U B1924 -78.897 -4.278 3.276 1.00 13.70 C
ATOM 16 O2 U B1924 -78.072 -3.435 3.038 1.00 13.70 O
ATOM 17 N3 U B1924 -78.604 -5.487 3.840 1.00 13.70 N
ATOM 18 C4 U B1924 -79.497 -6.483 4.142 1.00 13.70 C
ATOM 19 O4 U B1924 -79.130 -7.524 4.669 1.00 13.70 O
ATOM 20 C5 U B1924 -80.842 -6.193 3.806 1.00 13.70 C
ATOM 21 C6 U B1924 -81.141 -5.017 3.254 1.00 13.70 C
ATOM 22 P A B1925 -81.407 -3.046 -2.141 1.00 10.68 P
ATOM 23 OP1 A B1925 -81.738 -2.069 -3.213 1.00 10.68 O
ATOM 24 OP2 A B1925 -81.731 -4.483 -2.362 1.00 10.68 O
ATOM 25 O5' A B1925 -79.881 -2.899 -1.739 1.00 10.68 O
TER
Atoms:
OP1: (-76.663,-13.248,8.080)
OP2: (-78.721,-13.232,6.619)
C3': (-74.061,-9.543,7.755)
C1': (-74.157,-9.115,5.420)
C5': (-76.465,-10.440,7.765)
O4': (-75.278,-9.856,5.774)
C8: (-75.820,-7.217,5.193)
O2': (-72.198,-10.045,6.374)
C6: (-74.000,-4.637,3.685)
C5: (-74.607,-5.744,4.274)
C4: (-73.809,-6.858,4.453)
P: (-77.378,-12.718,6.906)
C4': (-75.122,-10.405,7.090)
C2': (-73.200,-9.096,6.602)
C2: (-72.064,-5.890,3.567)
N1: (-72.712,-4.744,3.340)
N3: (-72.519,-7.012,4.119)
N6: (-74.600,-3.488,3.436)
N7: (-75.882,-5.984,4.747)
N9: (-74.594,-7.782,5.051)
O5': (-77.409,-11.136,6.972)
O3': (-73.319,-10.256,8.724)
OP2: (-78.721,-13.232,6.619)
C3': (-74.061,-9.543,7.755)
C1': (-74.157,-9.115,5.420)
C5': (-76.465,-10.440,7.765)
O4': (-75.278,-9.856,5.774)
C8: (-75.820,-7.217,5.193)
O2': (-72.198,-10.045,6.374)
C6: (-74.000,-4.637,3.685)
C5: (-74.607,-5.744,4.274)
C4: (-73.809,-6.858,4.453)
P: (-77.378,-12.718,6.906)
C4': (-75.122,-10.405,7.090)
C2': (-73.200,-9.096,6.602)
C2: (-72.064,-5.890,3.567)
N1: (-72.712,-4.744,3.340)
N3: (-72.519,-7.012,4.119)
N6: (-74.600,-3.488,3.436)
N7: (-75.882,-5.984,4.747)
N9: (-74.594,-7.782,5.051)
O5': (-77.409,-11.136,6.972)
O3': (-73.319,-10.256,8.724)
C4: (-79.497,-6.483,4.142)
N3: (-78.604,-5.487,3.840)
OP1: (-85.785,-6.128,-0.112)
OP2: (-83.243,-6.337,0.133)
C2: (-78.897,-4.278,3.276)
C1': (-80.594,-2.763,2.427)
C3': (-81.848,-3.110,0.465)
O5': (-84.462,-4.168,0.760)
O4': (-81.936,-2.542,2.755)
C5': (-83.944,-3.550,1.913)
P: (-84.547,-5.765,0.622)
C4': (-82.778,-2.644,1.587)
C2': (-80.462,-2.678,0.930)
O2': (-80.201,-1.326,0.589)
N1: (-80.203,-4.071,2.964)
O4: (-79.130,-7.524,4.669)
O2: (-78.072,-3.435,3.038)
C6: (-81.141,-5.017,3.254)
C5: (-80.842,-6.193,3.806)
O3': (-82.194,-2.576,-0.801)
N3: (-78.604,-5.487,3.840)
OP1: (-85.785,-6.128,-0.112)
OP2: (-83.243,-6.337,0.133)
C2: (-78.897,-4.278,3.276)
C1': (-80.594,-2.763,2.427)
C3': (-81.848,-3.110,0.465)
O5': (-84.462,-4.168,0.760)
O4': (-81.936,-2.542,2.755)
C5': (-83.944,-3.550,1.913)
P: (-84.547,-5.765,0.622)
C4': (-82.778,-2.644,1.587)
C2': (-80.462,-2.678,0.930)
O2': (-80.201,-1.326,0.589)
N1: (-80.203,-4.071,2.964)
O4: (-79.130,-7.524,4.669)
O2: (-78.072,-3.435,3.038)
C6: (-81.141,-5.017,3.254)
C5: (-80.842,-6.193,3.806)
O3': (-82.194,-2.576,-0.801)
Image (generated by PyMOL):