Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2039:A2040
Extra
PDB:
ATOM 1 O3' C A2038 -74.309 -95.034 -7.977 1.00 59.48 O
ATOM 2 P C A2039 -74.048 -93.501 -7.607 1.00 54.80 P
ATOM 3 OP1 C A2039 -74.363 -93.342 -6.166 1.00 51.89 O
ATOM 4 OP2 C A2039 -74.713 -92.659 -8.637 1.00 40.00 O
ATOM 5 O5' C A2039 -72.480 -93.343 -7.841 1.00 49.08 O
ATOM 6 C5' C A2039 -71.568 -93.888 -6.924 1.00 37.32 C
ATOM 7 C4' C A2039 -70.174 -93.462 -7.332 1.00 42.33 C
ATOM 8 O4' C A2039 -69.810 -94.075 -8.592 1.00 47.67 O
ATOM 9 C3' C A2039 -70.013 -91.988 -7.621 1.00 47.78 C
ATOM 10 O3' C A2039 -69.894 -91.291 -6.391 1.00 52.81 O
ATOM 11 C2' C A2039 -68.717 -92.006 -8.425 1.00 49.02 C
ATOM 12 O2' C A2039 -67.563 -92.193 -7.635 1.00 43.10 O
ATOM 13 C1' C A2039 -68.942 -93.224 -9.300 1.00 50.11 C
ATOM 14 N1 C A2039 -69.625 -92.841 -10.530 1.00 52.64 N
ATOM 15 C2 C A2039 -68.918 -92.094 -11.463 1.00 51.55 C
ATOM 16 O2 C A2039 -67.750 -91.806 -11.195 1.00 59.25 O
ATOM 17 N3 C A2039 -69.524 -91.717 -12.617 1.00 48.38 N
ATOM 18 C4 C A2039 -70.790 -92.071 -12.837 1.00 52.83 C
ATOM 19 N4 C A2039 -71.355 -91.676 -13.979 1.00 50.25 N
ATOM 20 C5 C A2039 -71.537 -92.838 -11.891 1.00 66.49 C
ATOM 21 C6 C A2039 -70.921 -93.195 -10.756 1.00 61.42 C
ATOM 22 P G A2040 -69.739 -89.687 -6.364 1.00 50.40 P
ATOM 23 OP1 G A2040 -69.631 -89.256 -4.942 1.00 44.72 O
ATOM 24 OP2 G A2040 -70.813 -89.121 -7.216 1.00 49.96 O
ATOM 25 O5' G A2040 -68.331 -89.528 -7.141 1.00 41.77 O
TER
ATOM 1 O3' C B2039 -69.894 -91.291 -6.391 1.00 52.81 O
ATOM 2 P G B2040 -69.739 -89.687 -6.364 1.00 50.40 P
ATOM 3 OP1 G B2040 -69.631 -89.256 -4.942 1.00 44.72 O
ATOM 4 OP2 G B2040 -70.813 -89.121 -7.216 1.00 49.96 O
ATOM 5 O5' G B2040 -68.331 -89.528 -7.141 1.00 41.77 O
ATOM 6 C5' G B2040 -67.587 -88.326 -7.273 1.00 35.32 C
ATOM 7 C4' G B2040 -66.421 -88.614 -8.197 1.00 41.21 C
ATOM 8 O4' G B2040 -66.939 -89.398 -9.292 1.00 44.88 O
ATOM 9 C3' G B2040 -65.735 -87.426 -8.863 1.00 46.53 C
ATOM 10 O3' G B2040 -64.655 -86.926 -8.046 1.00 39.71 O
ATOM 11 C2' G B2040 -65.196 -88.039 -10.151 1.00 42.89 C
ATOM 12 O2' G B2040 -63.956 -88.705 -9.962 1.00 37.50 O
ATOM 13 C1' G B2040 -66.287 -89.045 -10.494 1.00 45.23 C
ATOM 14 N9 G B2040 -67.332 -88.538 -11.365 1.00 44.57 N
ATOM 15 C8 G B2040 -68.678 -88.558 -11.108 1.00 50.06 C
ATOM 16 N7 G B2040 -69.392 -88.046 -12.064 1.00 41.30 N
ATOM 17 C5 G B2040 -68.455 -87.666 -13.014 1.00 40.52 C
ATOM 18 C6 G B2040 -68.632 -87.038 -14.266 1.00 43.71 C
ATOM 19 O6 G B2040 -69.685 -86.683 -14.809 1.00 47.51 O
ATOM 20 N1 G B2040 -67.422 -86.821 -14.912 1.00 43.84 N
ATOM 21 C2 G B2040 -66.196 -87.162 -14.414 1.00 44.99 C
ATOM 22 N2 G B2040 -65.156 -86.865 -15.201 1.00 50.69 N
ATOM 23 N3 G B2040 -66.008 -87.748 -13.238 1.00 50.62 N
ATOM 24 C4 G B2040 -67.181 -87.964 -12.599 1.00 45.04 C
ATOM 25 P U B2041 -64.508 -85.339 -7.843 1.00 38.25 P
ATOM 26 OP1 U B2041 -63.470 -85.070 -6.818 1.00 36.86 O
ATOM 27 OP2 U B2041 -65.869 -84.769 -7.651 1.00 43.36 O
ATOM 28 O5' U B2041 -63.979 -84.900 -9.288 1.00 43.83 O
TER
ATOM 2 P C A2039 -74.048 -93.501 -7.607 1.00 54.80 P
ATOM 3 OP1 C A2039 -74.363 -93.342 -6.166 1.00 51.89 O
ATOM 4 OP2 C A2039 -74.713 -92.659 -8.637 1.00 40.00 O
ATOM 5 O5' C A2039 -72.480 -93.343 -7.841 1.00 49.08 O
ATOM 6 C5' C A2039 -71.568 -93.888 -6.924 1.00 37.32 C
ATOM 7 C4' C A2039 -70.174 -93.462 -7.332 1.00 42.33 C
ATOM 8 O4' C A2039 -69.810 -94.075 -8.592 1.00 47.67 O
ATOM 9 C3' C A2039 -70.013 -91.988 -7.621 1.00 47.78 C
ATOM 10 O3' C A2039 -69.894 -91.291 -6.391 1.00 52.81 O
ATOM 11 C2' C A2039 -68.717 -92.006 -8.425 1.00 49.02 C
ATOM 12 O2' C A2039 -67.563 -92.193 -7.635 1.00 43.10 O
ATOM 13 C1' C A2039 -68.942 -93.224 -9.300 1.00 50.11 C
ATOM 14 N1 C A2039 -69.625 -92.841 -10.530 1.00 52.64 N
ATOM 15 C2 C A2039 -68.918 -92.094 -11.463 1.00 51.55 C
ATOM 16 O2 C A2039 -67.750 -91.806 -11.195 1.00 59.25 O
ATOM 17 N3 C A2039 -69.524 -91.717 -12.617 1.00 48.38 N
ATOM 18 C4 C A2039 -70.790 -92.071 -12.837 1.00 52.83 C
ATOM 19 N4 C A2039 -71.355 -91.676 -13.979 1.00 50.25 N
ATOM 20 C5 C A2039 -71.537 -92.838 -11.891 1.00 66.49 C
ATOM 21 C6 C A2039 -70.921 -93.195 -10.756 1.00 61.42 C
ATOM 22 P G A2040 -69.739 -89.687 -6.364 1.00 50.40 P
ATOM 23 OP1 G A2040 -69.631 -89.256 -4.942 1.00 44.72 O
ATOM 24 OP2 G A2040 -70.813 -89.121 -7.216 1.00 49.96 O
ATOM 25 O5' G A2040 -68.331 -89.528 -7.141 1.00 41.77 O
TER
ATOM 1 O3' C B2039 -69.894 -91.291 -6.391 1.00 52.81 O
ATOM 2 P G B2040 -69.739 -89.687 -6.364 1.00 50.40 P
ATOM 3 OP1 G B2040 -69.631 -89.256 -4.942 1.00 44.72 O
ATOM 4 OP2 G B2040 -70.813 -89.121 -7.216 1.00 49.96 O
ATOM 5 O5' G B2040 -68.331 -89.528 -7.141 1.00 41.77 O
ATOM 6 C5' G B2040 -67.587 -88.326 -7.273 1.00 35.32 C
ATOM 7 C4' G B2040 -66.421 -88.614 -8.197 1.00 41.21 C
ATOM 8 O4' G B2040 -66.939 -89.398 -9.292 1.00 44.88 O
ATOM 9 C3' G B2040 -65.735 -87.426 -8.863 1.00 46.53 C
ATOM 10 O3' G B2040 -64.655 -86.926 -8.046 1.00 39.71 O
ATOM 11 C2' G B2040 -65.196 -88.039 -10.151 1.00 42.89 C
ATOM 12 O2' G B2040 -63.956 -88.705 -9.962 1.00 37.50 O
ATOM 13 C1' G B2040 -66.287 -89.045 -10.494 1.00 45.23 C
ATOM 14 N9 G B2040 -67.332 -88.538 -11.365 1.00 44.57 N
ATOM 15 C8 G B2040 -68.678 -88.558 -11.108 1.00 50.06 C
ATOM 16 N7 G B2040 -69.392 -88.046 -12.064 1.00 41.30 N
ATOM 17 C5 G B2040 -68.455 -87.666 -13.014 1.00 40.52 C
ATOM 18 C6 G B2040 -68.632 -87.038 -14.266 1.00 43.71 C
ATOM 19 O6 G B2040 -69.685 -86.683 -14.809 1.00 47.51 O
ATOM 20 N1 G B2040 -67.422 -86.821 -14.912 1.00 43.84 N
ATOM 21 C2 G B2040 -66.196 -87.162 -14.414 1.00 44.99 C
ATOM 22 N2 G B2040 -65.156 -86.865 -15.201 1.00 50.69 N
ATOM 23 N3 G B2040 -66.008 -87.748 -13.238 1.00 50.62 N
ATOM 24 C4 G B2040 -67.181 -87.964 -12.599 1.00 45.04 C
ATOM 25 P U B2041 -64.508 -85.339 -7.843 1.00 38.25 P
ATOM 26 OP1 U B2041 -63.470 -85.070 -6.818 1.00 36.86 O
ATOM 27 OP2 U B2041 -65.869 -84.769 -7.651 1.00 43.36 O
ATOM 28 O5' U B2041 -63.979 -84.900 -9.288 1.00 43.83 O
TER
Atoms:
C2: (-68.918,-92.094,-11.463)
OP1: (-74.363,-93.342,-6.166)
OP2: (-74.713,-92.659,-8.637)
C4: (-70.790,-92.071,-12.837)
O5': (-72.480,-93.343,-7.841)
C3': (-70.013,-91.988,-7.621)
C1': (-68.942,-93.224,-9.300)
O4': (-69.810,-94.075,-8.592)
C5': (-71.568,-93.888,-6.924)
P: (-74.048,-93.501,-7.607)
O2: (-67.750,-91.806,-11.195)
C4': (-70.174,-93.462,-7.332)
C2': (-68.717,-92.006,-8.425)
O2': (-67.563,-92.193,-7.635)
N1: (-69.625,-92.841,-10.530)
N3: (-69.524,-91.717,-12.617)
N4: (-71.355,-91.676,-13.979)
C6: (-70.921,-93.195,-10.756)
C5: (-71.537,-92.838,-11.891)
O3': (-69.894,-91.291,-6.391)
OP1: (-74.363,-93.342,-6.166)
OP2: (-74.713,-92.659,-8.637)
C4: (-70.790,-92.071,-12.837)
O5': (-72.480,-93.343,-7.841)
C3': (-70.013,-91.988,-7.621)
C1': (-68.942,-93.224,-9.300)
O4': (-69.810,-94.075,-8.592)
C5': (-71.568,-93.888,-6.924)
P: (-74.048,-93.501,-7.607)
O2: (-67.750,-91.806,-11.195)
C4': (-70.174,-93.462,-7.332)
C2': (-68.717,-92.006,-8.425)
O2': (-67.563,-92.193,-7.635)
N1: (-69.625,-92.841,-10.530)
N3: (-69.524,-91.717,-12.617)
N4: (-71.355,-91.676,-13.979)
C6: (-70.921,-93.195,-10.756)
C5: (-71.537,-92.838,-11.891)
O3': (-69.894,-91.291,-6.391)
OP1: (-69.631,-89.256,-4.942)
OP2: (-70.813,-89.121,-7.216)
C3': (-65.735,-87.426,-8.863)
C1': (-66.287,-89.045,-10.494)
C5': (-67.587,-88.326,-7.273)
O6: (-69.685,-86.683,-14.809)
O4': (-66.939,-89.398,-9.292)
C8: (-68.678,-88.558,-11.108)
C2: (-66.196,-87.162,-14.414)
C6: (-68.632,-87.038,-14.266)
C5: (-68.455,-87.666,-13.014)
C4: (-67.181,-87.964,-12.599)
P: (-69.739,-89.687,-6.364)
C4': (-66.421,-88.614,-8.197)
C2': (-65.196,-88.039,-10.151)
O2': (-63.956,-88.705,-9.962)
N1: (-67.422,-86.821,-14.912)
N2: (-65.156,-86.865,-15.201)
N3: (-66.008,-87.748,-13.238)
N7: (-69.392,-88.046,-12.064)
N9: (-67.332,-88.538,-11.365)
O5': (-68.331,-89.528,-7.141)
O3': (-64.655,-86.926,-8.046)
OP2: (-70.813,-89.121,-7.216)
C3': (-65.735,-87.426,-8.863)
C1': (-66.287,-89.045,-10.494)
C5': (-67.587,-88.326,-7.273)
O6: (-69.685,-86.683,-14.809)
O4': (-66.939,-89.398,-9.292)
C8: (-68.678,-88.558,-11.108)
C2: (-66.196,-87.162,-14.414)
C6: (-68.632,-87.038,-14.266)
C5: (-68.455,-87.666,-13.014)
C4: (-67.181,-87.964,-12.599)
P: (-69.739,-89.687,-6.364)
C4': (-66.421,-88.614,-8.197)
C2': (-65.196,-88.039,-10.151)
O2': (-63.956,-88.705,-9.962)
N1: (-67.422,-86.821,-14.912)
N2: (-65.156,-86.865,-15.201)
N3: (-66.008,-87.748,-13.238)
N7: (-69.392,-88.046,-12.064)
N9: (-67.332,-88.538,-11.365)
O5': (-68.331,-89.528,-7.141)
O3': (-64.655,-86.926,-8.046)
Image (generated by PyMOL):