Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B19:B20
Extra
PDB:
ATOM 1 O3' U A 18 -7.417 -17.537 0.305 1.00 65.11 O
ATOM 2 P C A 19 -7.846 -17.055 1.793 1.00 64.37 P
ATOM 3 OP1 C A 19 -6.810 -16.046 2.191 1.00 58.14 O
ATOM 4 OP2 C A 19 -8.140 -18.212 2.675 1.00 61.00 O
ATOM 5 O5' C A 19 -9.261 -16.331 1.494 1.00 67.03 O
ATOM 6 C5' C A 19 -10.318 -17.038 0.785 1.00 68.13 C
ATOM 7 C4' C A 19 -11.621 -16.233 0.811 1.00 70.12 C
ATOM 8 O4' C A 19 -11.453 -14.869 0.308 1.00 62.73 O
ATOM 9 C3' C A 19 -12.744 -16.830 -0.036 1.00 71.78 C
ATOM 10 O3' C A 19 -13.419 -17.908 0.681 1.00 76.13 O
ATOM 11 C2' C A 19 -13.599 -15.583 -0.368 1.00 70.99 C
ATOM 12 O2' C A 19 -14.580 -15.272 0.596 1.00 72.43 O
ATOM 13 C1' C A 19 -12.607 -14.428 -0.380 1.00 61.16 C
ATOM 14 N1 C A 19 -12.146 -14.018 -1.712 1.00 64.85 N
ATOM 15 C2 C A 19 -13.015 -13.556 -2.735 1.00 70.22 C
ATOM 16 O2 C A 19 -14.233 -13.490 -2.540 1.00 72.14 O
ATOM 17 N3 C A 19 -12.503 -13.203 -3.941 1.00 67.45 N
ATOM 18 C4 C A 19 -11.185 -13.295 -4.134 1.00 64.45 C
ATOM 19 N4 C A 19 -10.674 -12.947 -5.318 1.00 70.83 N
ATOM 20 C5 C A 19 -10.295 -13.746 -3.106 1.00 63.29 C
ATOM 21 C6 C A 19 -10.804 -14.091 -1.920 1.00 64.41 C
ATOM 22 P A A 20 -13.741 -19.269 -0.111 1.00 75.88 P
ATOM 23 OP1 A A 20 -14.277 -20.331 0.789 1.00 72.94 O
ATOM 24 OP2 A A 20 -12.517 -19.525 -0.907 1.00 76.22 O
ATOM 25 O5' A A 20 -14.928 -18.800 -1.063 1.00 71.51 O
TER
ATOM 1 O3' C B 19 -13.419 -17.908 0.681 1.00 76.13 O
ATOM 2 P A B 20 -13.741 -19.269 -0.111 1.00 75.88 P
ATOM 3 OP1 A B 20 -14.277 -20.331 0.789 1.00 72.94 O
ATOM 4 OP2 A B 20 -12.517 -19.525 -0.907 1.00 76.22 O
ATOM 5 O5' A B 20 -14.928 -18.800 -1.063 1.00 71.51 O
ATOM 6 C5' A B 20 -16.097 -18.238 -0.516 1.00 71.10 C
ATOM 7 C4' A B 20 -16.793 -17.434 -1.596 1.00 73.73 C
ATOM 8 O4' A B 20 -15.892 -16.459 -2.182 1.00 69.97 O
ATOM 9 C3' A B 20 -17.232 -18.232 -2.802 1.00 73.51 C
ATOM 10 O3' A B 20 -18.422 -18.954 -2.527 1.00 72.49 O
ATOM 11 C2' A B 20 -17.470 -17.134 -3.824 1.00 73.73 C
ATOM 12 O2' A B 20 -18.792 -16.647 -3.744 1.00 76.00 O
ATOM 13 C1' A B 20 -16.419 -16.083 -3.445 1.00 72.88 C
ATOM 14 N9 A B 20 -15.333 -16.104 -4.408 1.00 72.04 N
ATOM 15 C8 A B 20 -13.997 -16.290 -4.184 1.00 72.08 C
ATOM 16 N7 A B 20 -13.265 -16.284 -5.274 1.00 71.79 N
ATOM 17 C5 A B 20 -14.189 -16.086 -6.276 1.00 72.69 C
ATOM 18 C6 A B 20 -14.064 -15.989 -7.670 1.00 70.56 C
ATOM 19 N6 A B 20 -12.905 -16.068 -8.314 1.00 69.62 N
ATOM 20 N1 A B 20 -15.184 -15.808 -8.386 1.00 72.38 N
ATOM 21 C2 A B 20 -16.361 -15.721 -7.750 1.00 76.78 C
ATOM 22 N3 A B 20 -16.610 -15.806 -6.444 1.00 78.51 N
ATOM 23 C4 A B 20 -15.467 -15.992 -5.761 1.00 74.49 C
ATOM 24 P C B 21 -18.449 -20.509 -2.963 1.00 79.39 P
ATOM 25 OP1 C B 21 -19.764 -21.149 -2.707 1.00 83.18 O
ATOM 26 OP2 C B 21 -17.252 -21.122 -2.343 1.00 79.99 O
ATOM 27 O5' C B 21 -18.221 -20.371 -4.548 1.00 79.18 O
TER
ATOM 2 P C A 19 -7.846 -17.055 1.793 1.00 64.37 P
ATOM 3 OP1 C A 19 -6.810 -16.046 2.191 1.00 58.14 O
ATOM 4 OP2 C A 19 -8.140 -18.212 2.675 1.00 61.00 O
ATOM 5 O5' C A 19 -9.261 -16.331 1.494 1.00 67.03 O
ATOM 6 C5' C A 19 -10.318 -17.038 0.785 1.00 68.13 C
ATOM 7 C4' C A 19 -11.621 -16.233 0.811 1.00 70.12 C
ATOM 8 O4' C A 19 -11.453 -14.869 0.308 1.00 62.73 O
ATOM 9 C3' C A 19 -12.744 -16.830 -0.036 1.00 71.78 C
ATOM 10 O3' C A 19 -13.419 -17.908 0.681 1.00 76.13 O
ATOM 11 C2' C A 19 -13.599 -15.583 -0.368 1.00 70.99 C
ATOM 12 O2' C A 19 -14.580 -15.272 0.596 1.00 72.43 O
ATOM 13 C1' C A 19 -12.607 -14.428 -0.380 1.00 61.16 C
ATOM 14 N1 C A 19 -12.146 -14.018 -1.712 1.00 64.85 N
ATOM 15 C2 C A 19 -13.015 -13.556 -2.735 1.00 70.22 C
ATOM 16 O2 C A 19 -14.233 -13.490 -2.540 1.00 72.14 O
ATOM 17 N3 C A 19 -12.503 -13.203 -3.941 1.00 67.45 N
ATOM 18 C4 C A 19 -11.185 -13.295 -4.134 1.00 64.45 C
ATOM 19 N4 C A 19 -10.674 -12.947 -5.318 1.00 70.83 N
ATOM 20 C5 C A 19 -10.295 -13.746 -3.106 1.00 63.29 C
ATOM 21 C6 C A 19 -10.804 -14.091 -1.920 1.00 64.41 C
ATOM 22 P A A 20 -13.741 -19.269 -0.111 1.00 75.88 P
ATOM 23 OP1 A A 20 -14.277 -20.331 0.789 1.00 72.94 O
ATOM 24 OP2 A A 20 -12.517 -19.525 -0.907 1.00 76.22 O
ATOM 25 O5' A A 20 -14.928 -18.800 -1.063 1.00 71.51 O
TER
ATOM 1 O3' C B 19 -13.419 -17.908 0.681 1.00 76.13 O
ATOM 2 P A B 20 -13.741 -19.269 -0.111 1.00 75.88 P
ATOM 3 OP1 A B 20 -14.277 -20.331 0.789 1.00 72.94 O
ATOM 4 OP2 A B 20 -12.517 -19.525 -0.907 1.00 76.22 O
ATOM 5 O5' A B 20 -14.928 -18.800 -1.063 1.00 71.51 O
ATOM 6 C5' A B 20 -16.097 -18.238 -0.516 1.00 71.10 C
ATOM 7 C4' A B 20 -16.793 -17.434 -1.596 1.00 73.73 C
ATOM 8 O4' A B 20 -15.892 -16.459 -2.182 1.00 69.97 O
ATOM 9 C3' A B 20 -17.232 -18.232 -2.802 1.00 73.51 C
ATOM 10 O3' A B 20 -18.422 -18.954 -2.527 1.00 72.49 O
ATOM 11 C2' A B 20 -17.470 -17.134 -3.824 1.00 73.73 C
ATOM 12 O2' A B 20 -18.792 -16.647 -3.744 1.00 76.00 O
ATOM 13 C1' A B 20 -16.419 -16.083 -3.445 1.00 72.88 C
ATOM 14 N9 A B 20 -15.333 -16.104 -4.408 1.00 72.04 N
ATOM 15 C8 A B 20 -13.997 -16.290 -4.184 1.00 72.08 C
ATOM 16 N7 A B 20 -13.265 -16.284 -5.274 1.00 71.79 N
ATOM 17 C5 A B 20 -14.189 -16.086 -6.276 1.00 72.69 C
ATOM 18 C6 A B 20 -14.064 -15.989 -7.670 1.00 70.56 C
ATOM 19 N6 A B 20 -12.905 -16.068 -8.314 1.00 69.62 N
ATOM 20 N1 A B 20 -15.184 -15.808 -8.386 1.00 72.38 N
ATOM 21 C2 A B 20 -16.361 -15.721 -7.750 1.00 76.78 C
ATOM 22 N3 A B 20 -16.610 -15.806 -6.444 1.00 78.51 N
ATOM 23 C4 A B 20 -15.467 -15.992 -5.761 1.00 74.49 C
ATOM 24 P C B 21 -18.449 -20.509 -2.963 1.00 79.39 P
ATOM 25 OP1 C B 21 -19.764 -21.149 -2.707 1.00 83.18 O
ATOM 26 OP2 C B 21 -17.252 -21.122 -2.343 1.00 79.99 O
ATOM 27 O5' C B 21 -18.221 -20.371 -4.548 1.00 79.18 O
TER
Atoms:
C2: (-13.015,-13.556,-2.735)
OP1: (-6.810,-16.046,2.191)
OP2: (-8.140,-18.212,2.675)
C4: (-11.185,-13.295,-4.134)
O5': (-9.261,-16.331,1.494)
C3': (-12.744,-16.830,-0.036)
C1': (-12.607,-14.428,-0.380)
O4': (-11.453,-14.869,0.308)
C5': (-10.318,-17.038,0.785)
P: (-7.846,-17.055,1.793)
O2: (-14.233,-13.490,-2.540)
C4': (-11.621,-16.233,0.811)
C2': (-13.599,-15.583,-0.368)
O2': (-14.580,-15.272,0.596)
N1: (-12.146,-14.018,-1.712)
N3: (-12.503,-13.203,-3.941)
N4: (-10.674,-12.947,-5.318)
C6: (-10.804,-14.091,-1.920)
C5: (-10.295,-13.746,-3.106)
O3': (-13.419,-17.908,0.681)
OP1: (-6.810,-16.046,2.191)
OP2: (-8.140,-18.212,2.675)
C4: (-11.185,-13.295,-4.134)
O5': (-9.261,-16.331,1.494)
C3': (-12.744,-16.830,-0.036)
C1': (-12.607,-14.428,-0.380)
O4': (-11.453,-14.869,0.308)
C5': (-10.318,-17.038,0.785)
P: (-7.846,-17.055,1.793)
O2: (-14.233,-13.490,-2.540)
C4': (-11.621,-16.233,0.811)
C2': (-13.599,-15.583,-0.368)
O2': (-14.580,-15.272,0.596)
N1: (-12.146,-14.018,-1.712)
N3: (-12.503,-13.203,-3.941)
N4: (-10.674,-12.947,-5.318)
C6: (-10.804,-14.091,-1.920)
C5: (-10.295,-13.746,-3.106)
O3': (-13.419,-17.908,0.681)
OP1: (-14.277,-20.331,0.789)
OP2: (-12.517,-19.525,-0.907)
C3': (-17.232,-18.232,-2.802)
C1': (-16.419,-16.083,-3.445)
C5': (-16.097,-18.238,-0.516)
O4': (-15.892,-16.459,-2.182)
C8: (-13.997,-16.290,-4.184)
O2': (-18.792,-16.647,-3.744)
C6: (-14.064,-15.989,-7.670)
C5: (-14.189,-16.086,-6.276)
C4: (-15.467,-15.992,-5.761)
P: (-13.741,-19.269,-0.111)
C4': (-16.793,-17.434,-1.596)
C2': (-17.470,-17.134,-3.824)
C2: (-16.361,-15.721,-7.750)
N1: (-15.184,-15.808,-8.386)
N3: (-16.610,-15.806,-6.444)
N6: (-12.905,-16.068,-8.314)
N7: (-13.265,-16.284,-5.274)
N9: (-15.333,-16.104,-4.408)
O5': (-14.928,-18.800,-1.063)
O3': (-18.422,-18.954,-2.527)
OP2: (-12.517,-19.525,-0.907)
C3': (-17.232,-18.232,-2.802)
C1': (-16.419,-16.083,-3.445)
C5': (-16.097,-18.238,-0.516)
O4': (-15.892,-16.459,-2.182)
C8: (-13.997,-16.290,-4.184)
O2': (-18.792,-16.647,-3.744)
C6: (-14.064,-15.989,-7.670)
C5: (-14.189,-16.086,-6.276)
C4: (-15.467,-15.992,-5.761)
P: (-13.741,-19.269,-0.111)
C4': (-16.793,-17.434,-1.596)
C2': (-17.470,-17.134,-3.824)
C2: (-16.361,-15.721,-7.750)
N1: (-15.184,-15.808,-8.386)
N3: (-16.610,-15.806,-6.444)
N6: (-12.905,-16.068,-8.314)
N7: (-13.265,-16.284,-5.274)
N9: (-15.333,-16.104,-4.408)
O5': (-14.928,-18.800,-1.063)
O3': (-18.422,-18.954,-2.527)
Image (generated by PyMOL):