Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:936:937
Extra
PDB:
ATOM 1 O3' C A 35 81.995 17.879 78.773 1.00 78.03 O
ATOM 2 P C A 36 83.210 18.847 79.183 1.00 77.58 P
ATOM 3 OP1 C A 36 83.297 19.862 78.109 1.00 78.33 O
ATOM 4 OP2 C A 36 84.406 18.041 79.528 1.00 77.06 O
ATOM 5 O5' C A 36 82.729 19.548 80.534 1.00 78.33 O
ATOM 6 C5' C A 36 81.720 20.579 80.532 1.00 76.39 C
ATOM 7 C4' C A 36 81.387 20.986 81.949 1.00 75.05 C
ATOM 8 O4' C A 36 80.864 19.832 82.661 1.00 74.96 O
ATOM 9 C3' C A 36 82.557 21.421 82.817 1.00 75.27 C
ATOM 10 O3' C A 36 82.992 22.752 82.579 1.00 75.99 O
ATOM 11 C2' C A 36 82.008 21.212 84.221 1.00 75.38 C
ATOM 12 O2' C A 36 81.133 22.223 84.685 1.00 75.18 O
ATOM 13 C1' C A 36 81.236 19.908 84.032 1.00 76.03 C
ATOM 14 N1 C A 36 82.090 18.756 84.368 1.00 77.39 N
ATOM 15 C2 C A 36 82.310 18.463 85.719 1.00 78.02 C
ATOM 16 O2 C A 36 81.739 19.152 86.584 1.00 77.66 O
ATOM 17 N3 C A 36 83.135 17.442 86.049 1.00 78.50 N
ATOM 18 C4 C A 36 83.721 16.721 85.091 1.00 78.46 C
ATOM 19 N4 C A 36 84.530 15.730 85.462 1.00 77.59 N
ATOM 20 C5 C A 36 83.500 16.984 83.709 1.00 78.78 C
ATOM 21 C6 C A 36 82.680 17.997 83.395 1.00 78.58 C
ATOM 22 P A A 37 84.511 23.158 82.921 1.00 76.53 P
ATOM 23 OP1 A A 37 84.723 24.563 82.504 1.00 78.37 O
ATOM 24 OP2 A A 37 85.411 22.099 82.403 1.00 77.64 O
ATOM 25 O5' A A 37 84.571 23.128 84.507 1.00 76.37 O
TER
ATOM 1 O3' C B 36 82.992 22.752 82.579 1.00 75.99 O
ATOM 2 P A B 37 84.511 23.158 82.921 1.00 76.53 P
ATOM 3 OP1 A B 37 84.723 24.563 82.504 1.00 78.37 O
ATOM 4 OP2 A B 37 85.411 22.099 82.403 1.00 77.64 O
ATOM 5 O5' A B 37 84.571 23.128 84.507 1.00 76.37 O
ATOM 6 C5' A B 37 83.715 23.974 85.279 1.00 77.77 C
ATOM 7 C4' A B 37 83.885 23.680 86.740 1.00 79.90 C
ATOM 8 O4' A B 37 83.512 22.304 87.005 1.00 82.13 O
ATOM 9 C3' A B 37 85.309 23.754 87.250 1.00 80.88 C
ATOM 10 O3' A B 37 85.690 25.092 87.505 1.00 81.95 O
ATOM 11 C2' A B 37 85.223 22.932 88.525 1.00 81.52 C
ATOM 12 O2' A B 37 84.606 23.644 89.574 1.00 81.84 O
ATOM 13 C1' A B 37 84.287 21.806 88.087 1.00 82.15 C
ATOM 14 N9 A B 37 85.001 20.600 87.658 1.00 83.35 N
ATOM 15 C8 A B 37 85.141 20.064 86.397 1.00 83.61 C
ATOM 16 N7 A B 37 85.866 18.971 86.364 1.00 83.64 N
ATOM 17 C5 A B 37 86.229 18.773 87.692 1.00 85.00 C
ATOM 18 C6 A B 37 87.008 17.786 88.328 1.00 85.91 C
ATOM 19 N6 A B 37 87.603 16.779 87.683 1.00 87.22 N
ATOM 20 N1 A B 37 87.161 17.874 89.670 1.00 86.00 N
ATOM 21 C2 A B 37 86.574 18.888 90.317 1.00 85.25 C
ATOM 22 N3 A B 37 85.831 19.878 89.832 1.00 84.52 N
ATOM 23 C4 A B 37 85.694 19.762 88.499 1.00 84.34 C
ATOM 24 P U B 38 87.042 25.671 86.862 1.00 83.99 P
ATOM 25 OP1 U B 38 86.649 26.697 85.860 1.00 84.34 O
ATOM 26 OP2 U B 38 87.901 24.530 86.444 1.00 84.40 O
ATOM 27 O5' U B 38 87.742 26.417 88.082 1.00 84.20 O
TER
ATOM 2 P C A 36 83.210 18.847 79.183 1.00 77.58 P
ATOM 3 OP1 C A 36 83.297 19.862 78.109 1.00 78.33 O
ATOM 4 OP2 C A 36 84.406 18.041 79.528 1.00 77.06 O
ATOM 5 O5' C A 36 82.729 19.548 80.534 1.00 78.33 O
ATOM 6 C5' C A 36 81.720 20.579 80.532 1.00 76.39 C
ATOM 7 C4' C A 36 81.387 20.986 81.949 1.00 75.05 C
ATOM 8 O4' C A 36 80.864 19.832 82.661 1.00 74.96 O
ATOM 9 C3' C A 36 82.557 21.421 82.817 1.00 75.27 C
ATOM 10 O3' C A 36 82.992 22.752 82.579 1.00 75.99 O
ATOM 11 C2' C A 36 82.008 21.212 84.221 1.00 75.38 C
ATOM 12 O2' C A 36 81.133 22.223 84.685 1.00 75.18 O
ATOM 13 C1' C A 36 81.236 19.908 84.032 1.00 76.03 C
ATOM 14 N1 C A 36 82.090 18.756 84.368 1.00 77.39 N
ATOM 15 C2 C A 36 82.310 18.463 85.719 1.00 78.02 C
ATOM 16 O2 C A 36 81.739 19.152 86.584 1.00 77.66 O
ATOM 17 N3 C A 36 83.135 17.442 86.049 1.00 78.50 N
ATOM 18 C4 C A 36 83.721 16.721 85.091 1.00 78.46 C
ATOM 19 N4 C A 36 84.530 15.730 85.462 1.00 77.59 N
ATOM 20 C5 C A 36 83.500 16.984 83.709 1.00 78.78 C
ATOM 21 C6 C A 36 82.680 17.997 83.395 1.00 78.58 C
ATOM 22 P A A 37 84.511 23.158 82.921 1.00 76.53 P
ATOM 23 OP1 A A 37 84.723 24.563 82.504 1.00 78.37 O
ATOM 24 OP2 A A 37 85.411 22.099 82.403 1.00 77.64 O
ATOM 25 O5' A A 37 84.571 23.128 84.507 1.00 76.37 O
TER
ATOM 1 O3' C B 36 82.992 22.752 82.579 1.00 75.99 O
ATOM 2 P A B 37 84.511 23.158 82.921 1.00 76.53 P
ATOM 3 OP1 A B 37 84.723 24.563 82.504 1.00 78.37 O
ATOM 4 OP2 A B 37 85.411 22.099 82.403 1.00 77.64 O
ATOM 5 O5' A B 37 84.571 23.128 84.507 1.00 76.37 O
ATOM 6 C5' A B 37 83.715 23.974 85.279 1.00 77.77 C
ATOM 7 C4' A B 37 83.885 23.680 86.740 1.00 79.90 C
ATOM 8 O4' A B 37 83.512 22.304 87.005 1.00 82.13 O
ATOM 9 C3' A B 37 85.309 23.754 87.250 1.00 80.88 C
ATOM 10 O3' A B 37 85.690 25.092 87.505 1.00 81.95 O
ATOM 11 C2' A B 37 85.223 22.932 88.525 1.00 81.52 C
ATOM 12 O2' A B 37 84.606 23.644 89.574 1.00 81.84 O
ATOM 13 C1' A B 37 84.287 21.806 88.087 1.00 82.15 C
ATOM 14 N9 A B 37 85.001 20.600 87.658 1.00 83.35 N
ATOM 15 C8 A B 37 85.141 20.064 86.397 1.00 83.61 C
ATOM 16 N7 A B 37 85.866 18.971 86.364 1.00 83.64 N
ATOM 17 C5 A B 37 86.229 18.773 87.692 1.00 85.00 C
ATOM 18 C6 A B 37 87.008 17.786 88.328 1.00 85.91 C
ATOM 19 N6 A B 37 87.603 16.779 87.683 1.00 87.22 N
ATOM 20 N1 A B 37 87.161 17.874 89.670 1.00 86.00 N
ATOM 21 C2 A B 37 86.574 18.888 90.317 1.00 85.25 C
ATOM 22 N3 A B 37 85.831 19.878 89.832 1.00 84.52 N
ATOM 23 C4 A B 37 85.694 19.762 88.499 1.00 84.34 C
ATOM 24 P U B 38 87.042 25.671 86.862 1.00 83.99 P
ATOM 25 OP1 U B 38 86.649 26.697 85.860 1.00 84.34 O
ATOM 26 OP2 U B 38 87.901 24.530 86.444 1.00 84.40 O
ATOM 27 O5' U B 38 87.742 26.417 88.082 1.00 84.20 O
TER
Atoms:
C2: (82.310,18.463,85.719)
OP1: (83.297,19.862,78.109)
OP2: (84.406,18.041,79.528)
C4: (83.721,16.721,85.091)
O5': (82.729,19.548,80.534)
C3': (82.557,21.421,82.817)
C1': (81.236,19.908,84.032)
O4': (80.864,19.832,82.661)
C5': (81.720,20.579,80.532)
P: (83.210,18.847,79.183)
O2: (81.739,19.152,86.584)
C4': (81.387,20.986,81.949)
C2': (82.008,21.212,84.221)
O2': (81.133,22.223,84.685)
N1: (82.090,18.756,84.368)
N3: (83.135,17.442,86.049)
N4: (84.530,15.730,85.462)
C6: (82.680,17.997,83.395)
C5: (83.500,16.984,83.709)
O3': (82.992,22.752,82.579)
OP1: (83.297,19.862,78.109)
OP2: (84.406,18.041,79.528)
C4: (83.721,16.721,85.091)
O5': (82.729,19.548,80.534)
C3': (82.557,21.421,82.817)
C1': (81.236,19.908,84.032)
O4': (80.864,19.832,82.661)
C5': (81.720,20.579,80.532)
P: (83.210,18.847,79.183)
O2: (81.739,19.152,86.584)
C4': (81.387,20.986,81.949)
C2': (82.008,21.212,84.221)
O2': (81.133,22.223,84.685)
N1: (82.090,18.756,84.368)
N3: (83.135,17.442,86.049)
N4: (84.530,15.730,85.462)
C6: (82.680,17.997,83.395)
C5: (83.500,16.984,83.709)
O3': (82.992,22.752,82.579)
OP1: (84.723,24.563,82.504)
OP2: (85.411,22.099,82.403)
C3': (85.309,23.754,87.250)
C1': (84.287,21.806,88.087)
C5': (83.715,23.974,85.279)
O4': (83.512,22.304,87.005)
C8: (85.141,20.064,86.397)
O2': (84.606,23.644,89.574)
C6: (87.008,17.786,88.328)
C5: (86.229,18.773,87.692)
C4: (85.694,19.762,88.499)
P: (84.511,23.158,82.921)
C4': (83.885,23.680,86.740)
C2': (85.223,22.932,88.525)
C2: (86.574,18.888,90.317)
N1: (87.161,17.874,89.670)
N3: (85.831,19.878,89.832)
N6: (87.603,16.779,87.683)
N7: (85.866,18.971,86.364)
N9: (85.001,20.600,87.658)
O5': (84.571,23.128,84.507)
O3': (85.690,25.092,87.505)
OP2: (85.411,22.099,82.403)
C3': (85.309,23.754,87.250)
C1': (84.287,21.806,88.087)
C5': (83.715,23.974,85.279)
O4': (83.512,22.304,87.005)
C8: (85.141,20.064,86.397)
O2': (84.606,23.644,89.574)
C6: (87.008,17.786,88.328)
C5: (86.229,18.773,87.692)
C4: (85.694,19.762,88.499)
P: (84.511,23.158,82.921)
C4': (83.885,23.680,86.740)
C2': (85.223,22.932,88.525)
C2: (86.574,18.888,90.317)
N1: (87.161,17.874,89.670)
N3: (85.831,19.878,89.832)
N6: (87.603,16.779,87.683)
N7: (85.866,18.971,86.364)
N9: (85.001,20.600,87.658)
O5': (84.571,23.128,84.507)
O3': (85.690,25.092,87.505)
Image (generated by PyMOL):