Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0984:0983
Extra
PDB:
ATOM 1 O3' G A 983 19.807 70.349 92.379 1.00 48.68 O
ATOM 2 P C A 984 18.915 70.838 91.137 1.00 49.26 P
ATOM 3 OP1 C A 984 17.792 71.635 91.706 1.00 46.97 O
ATOM 4 OP2 C A 984 18.626 69.644 90.301 1.00 47.94 O
ATOM 5 O5' C A 984 19.879 71.798 90.301 1.00 47.36 O
ATOM 6 C5' C A 984 20.354 73.049 90.846 1.00 45.86 C
ATOM 7 C4' C A 984 21.587 73.514 90.100 1.00 45.66 C
ATOM 8 O4' C A 984 22.638 72.531 90.261 1.00 46.26 O
ATOM 9 C3' C A 984 21.455 73.666 88.592 1.00 44.61 C
ATOM 10 O3' C A 984 20.891 74.926 88.240 1.00 43.53 O
ATOM 11 C2' C A 984 22.900 73.553 88.133 1.00 45.88 C
ATOM 12 O2' C A 984 23.646 74.736 88.313 1.00 47.55 O
ATOM 13 C1' C A 984 23.438 72.497 89.095 1.00 47.04 C
ATOM 14 N1 C A 984 23.384 71.152 88.509 1.00 49.84 N
ATOM 15 C2 C A 984 24.326 70.820 87.537 1.00 52.63 C
ATOM 16 O2 C A 984 25.188 71.651 87.238 1.00 54.50 O
ATOM 17 N3 C A 984 24.275 69.605 86.945 1.00 54.01 N
ATOM 18 C4 C A 984 23.333 68.734 87.298 1.00 53.49 C
ATOM 19 N4 C A 984 23.312 67.555 86.673 1.00 53.54 N
ATOM 20 C5 C A 984 22.369 69.035 88.308 1.00 53.58 C
ATOM 21 C6 C A 984 22.432 70.245 88.883 1.00 51.48 C
ATOM 22 P U A 985 19.917 75.044 86.965 1.00 42.01 P
ATOM 23 OP1 U A 985 19.297 76.393 86.991 1.00 40.75 O
ATOM 24 OP2 U A 985 19.055 73.845 86.941 1.00 42.82 O
ATOM 25 O5' U A 985 20.896 74.971 85.714 1.00 41.42 O
TER
ATOM 1 O3' C B 982 19.651 64.251 92.320 1.00 49.19 O
ATOM 2 P G B 983 19.239 65.329 91.203 1.00 49.39 P
ATOM 3 OP1 G B 983 17.782 65.581 91.296 1.00 48.90 O
ATOM 4 OP2 G B 983 19.831 64.873 89.917 1.00 48.96 O
ATOM 5 O5' G B 983 19.969 66.666 91.660 1.00 49.31 O
ATOM 6 C5' G B 983 19.759 67.214 92.972 1.00 47.31 C
ATOM 7 C4' G B 983 20.762 68.306 93.240 1.00 47.58 C
ATOM 8 O4' G B 983 22.106 67.753 93.259 1.00 47.69 O
ATOM 9 C3' G B 983 20.826 69.384 92.176 1.00 47.19 C
ATOM 10 O3' G B 983 19.807 70.349 92.379 1.00 48.68 O
ATOM 11 C2' G B 983 22.218 69.956 92.387 1.00 47.09 C
ATOM 12 O2' G B 983 22.261 70.812 93.512 1.00 46.97 O
ATOM 13 C1' G B 983 23.017 68.686 92.697 1.00 46.80 C
ATOM 14 N9 G B 983 23.636 68.072 91.523 1.00 46.22 N
ATOM 15 C8 G B 983 23.243 66.908 90.904 1.00 45.21 C
ATOM 16 N7 G B 983 23.979 66.599 89.871 1.00 45.14 N
ATOM 17 C5 G B 983 24.920 67.617 89.798 1.00 46.02 C
ATOM 18 C6 G B 983 25.981 67.824 88.870 1.00 45.60 C
ATOM 19 O6 G B 983 26.306 67.124 87.905 1.00 45.26 O
ATOM 20 N1 G B 983 26.692 68.987 89.156 1.00 44.00 N
ATOM 21 C2 G B 983 26.423 69.840 90.195 1.00 43.55 C
ATOM 22 N2 G B 983 27.227 70.903 90.295 1.00 42.20 N
ATOM 23 N3 G B 983 25.439 69.662 91.069 1.00 44.08 N
ATOM 24 C4 G B 983 24.730 68.537 90.811 1.00 46.02 C
ATOM 25 P C B 984 18.915 70.838 91.137 1.00 49.26 P
ATOM 26 OP1 C B 984 17.792 71.635 91.706 1.00 46.97 O
ATOM 27 OP2 C B 984 18.626 69.644 90.301 1.00 47.94 O
ATOM 28 O5' C B 984 19.879 71.798 90.301 1.00 47.36 O
TER
ATOM 2 P C A 984 18.915 70.838 91.137 1.00 49.26 P
ATOM 3 OP1 C A 984 17.792 71.635 91.706 1.00 46.97 O
ATOM 4 OP2 C A 984 18.626 69.644 90.301 1.00 47.94 O
ATOM 5 O5' C A 984 19.879 71.798 90.301 1.00 47.36 O
ATOM 6 C5' C A 984 20.354 73.049 90.846 1.00 45.86 C
ATOM 7 C4' C A 984 21.587 73.514 90.100 1.00 45.66 C
ATOM 8 O4' C A 984 22.638 72.531 90.261 1.00 46.26 O
ATOM 9 C3' C A 984 21.455 73.666 88.592 1.00 44.61 C
ATOM 10 O3' C A 984 20.891 74.926 88.240 1.00 43.53 O
ATOM 11 C2' C A 984 22.900 73.553 88.133 1.00 45.88 C
ATOM 12 O2' C A 984 23.646 74.736 88.313 1.00 47.55 O
ATOM 13 C1' C A 984 23.438 72.497 89.095 1.00 47.04 C
ATOM 14 N1 C A 984 23.384 71.152 88.509 1.00 49.84 N
ATOM 15 C2 C A 984 24.326 70.820 87.537 1.00 52.63 C
ATOM 16 O2 C A 984 25.188 71.651 87.238 1.00 54.50 O
ATOM 17 N3 C A 984 24.275 69.605 86.945 1.00 54.01 N
ATOM 18 C4 C A 984 23.333 68.734 87.298 1.00 53.49 C
ATOM 19 N4 C A 984 23.312 67.555 86.673 1.00 53.54 N
ATOM 20 C5 C A 984 22.369 69.035 88.308 1.00 53.58 C
ATOM 21 C6 C A 984 22.432 70.245 88.883 1.00 51.48 C
ATOM 22 P U A 985 19.917 75.044 86.965 1.00 42.01 P
ATOM 23 OP1 U A 985 19.297 76.393 86.991 1.00 40.75 O
ATOM 24 OP2 U A 985 19.055 73.845 86.941 1.00 42.82 O
ATOM 25 O5' U A 985 20.896 74.971 85.714 1.00 41.42 O
TER
ATOM 1 O3' C B 982 19.651 64.251 92.320 1.00 49.19 O
ATOM 2 P G B 983 19.239 65.329 91.203 1.00 49.39 P
ATOM 3 OP1 G B 983 17.782 65.581 91.296 1.00 48.90 O
ATOM 4 OP2 G B 983 19.831 64.873 89.917 1.00 48.96 O
ATOM 5 O5' G B 983 19.969 66.666 91.660 1.00 49.31 O
ATOM 6 C5' G B 983 19.759 67.214 92.972 1.00 47.31 C
ATOM 7 C4' G B 983 20.762 68.306 93.240 1.00 47.58 C
ATOM 8 O4' G B 983 22.106 67.753 93.259 1.00 47.69 O
ATOM 9 C3' G B 983 20.826 69.384 92.176 1.00 47.19 C
ATOM 10 O3' G B 983 19.807 70.349 92.379 1.00 48.68 O
ATOM 11 C2' G B 983 22.218 69.956 92.387 1.00 47.09 C
ATOM 12 O2' G B 983 22.261 70.812 93.512 1.00 46.97 O
ATOM 13 C1' G B 983 23.017 68.686 92.697 1.00 46.80 C
ATOM 14 N9 G B 983 23.636 68.072 91.523 1.00 46.22 N
ATOM 15 C8 G B 983 23.243 66.908 90.904 1.00 45.21 C
ATOM 16 N7 G B 983 23.979 66.599 89.871 1.00 45.14 N
ATOM 17 C5 G B 983 24.920 67.617 89.798 1.00 46.02 C
ATOM 18 C6 G B 983 25.981 67.824 88.870 1.00 45.60 C
ATOM 19 O6 G B 983 26.306 67.124 87.905 1.00 45.26 O
ATOM 20 N1 G B 983 26.692 68.987 89.156 1.00 44.00 N
ATOM 21 C2 G B 983 26.423 69.840 90.195 1.00 43.55 C
ATOM 22 N2 G B 983 27.227 70.903 90.295 1.00 42.20 N
ATOM 23 N3 G B 983 25.439 69.662 91.069 1.00 44.08 N
ATOM 24 C4 G B 983 24.730 68.537 90.811 1.00 46.02 C
ATOM 25 P C B 984 18.915 70.838 91.137 1.00 49.26 P
ATOM 26 OP1 C B 984 17.792 71.635 91.706 1.00 46.97 O
ATOM 27 OP2 C B 984 18.626 69.644 90.301 1.00 47.94 O
ATOM 28 O5' C B 984 19.879 71.798 90.301 1.00 47.36 O
TER
Atoms:
C2: (24.326,70.820,87.537)
OP1: (17.792,71.635,91.706)
OP2: (18.626,69.644,90.301)
C4: (23.333,68.734,87.298)
O5': (19.879,71.798,90.301)
C3': (21.455,73.666,88.592)
C1': (23.438,72.497,89.095)
O4': (22.638,72.531,90.261)
C5': (20.354,73.049,90.846)
P: (18.915,70.838,91.137)
O2: (25.188,71.651,87.238)
C4': (21.587,73.514,90.100)
C2': (22.900,73.553,88.133)
O2': (23.646,74.736,88.313)
N1: (23.384,71.152,88.509)
N3: (24.275,69.605,86.945)
N4: (23.312,67.555,86.673)
C6: (22.432,70.245,88.883)
C5: (22.369,69.035,88.308)
O3': (20.891,74.926,88.240)
OP1: (17.792,71.635,91.706)
OP2: (18.626,69.644,90.301)
C4: (23.333,68.734,87.298)
O5': (19.879,71.798,90.301)
C3': (21.455,73.666,88.592)
C1': (23.438,72.497,89.095)
O4': (22.638,72.531,90.261)
C5': (20.354,73.049,90.846)
P: (18.915,70.838,91.137)
O2: (25.188,71.651,87.238)
C4': (21.587,73.514,90.100)
C2': (22.900,73.553,88.133)
O2': (23.646,74.736,88.313)
N1: (23.384,71.152,88.509)
N3: (24.275,69.605,86.945)
N4: (23.312,67.555,86.673)
C6: (22.432,70.245,88.883)
C5: (22.369,69.035,88.308)
O3': (20.891,74.926,88.240)
OP1: (17.782,65.581,91.296)
OP2: (19.831,64.873,89.917)
C3': (20.826,69.384,92.176)
C1': (23.017,68.686,92.697)
C5': (19.759,67.214,92.972)
O6: (26.306,67.124,87.905)
O4': (22.106,67.753,93.259)
C8: (23.243,66.908,90.904)
C2: (26.423,69.840,90.195)
C6: (25.981,67.824,88.870)
C5: (24.920,67.617,89.798)
C4: (24.730,68.537,90.811)
P: (19.239,65.329,91.203)
C4': (20.762,68.306,93.240)
C2': (22.218,69.956,92.387)
O2': (22.261,70.812,93.512)
N1: (26.692,68.987,89.156)
N2: (27.227,70.903,90.295)
N3: (25.439,69.662,91.069)
N7: (23.979,66.599,89.871)
N9: (23.636,68.072,91.523)
O5': (19.969,66.666,91.660)
O3': (19.807,70.349,92.379)
OP2: (19.831,64.873,89.917)
C3': (20.826,69.384,92.176)
C1': (23.017,68.686,92.697)
C5': (19.759,67.214,92.972)
O6: (26.306,67.124,87.905)
O4': (22.106,67.753,93.259)
C8: (23.243,66.908,90.904)
C2: (26.423,69.840,90.195)
C6: (25.981,67.824,88.870)
C5: (24.920,67.617,89.798)
C4: (24.730,68.537,90.811)
P: (19.239,65.329,91.203)
C4': (20.762,68.306,93.240)
C2': (22.218,69.956,92.387)
O2': (22.261,70.812,93.512)
N1: (26.692,68.987,89.156)
N2: (27.227,70.903,90.295)
N3: (25.439,69.662,91.069)
N7: (23.979,66.599,89.871)
N9: (23.636,68.072,91.523)
O5': (19.969,66.666,91.660)
O3': (19.807,70.349,92.379)
Image (generated by PyMOL):