ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A107:A277

Extra

PDB:
ATOM 1 O3' U A 106 -53.040 4.979 -47.254 1.00 14.73 O
ATOM 2 P A A 107 -53.398 5.674 -45.854 1.00 53.49 P
ATOM 3 OP1 A A 107 -52.243 5.485 -44.951 1.00 43.57 O
ATOM 4 OP2 A A 107 -54.744 5.200 -45.427 1.00 42.38 O
ATOM 5 O5' A A 107 -53.484 7.221 -46.219 1.00 23.43 O
ATOM 6 C5' A A 107 -52.290 7.993 -46.453 1.00 26.60 C
ATOM 7 C4' A A 107 -52.301 9.227 -45.589 1.00 28.95 C
ATOM 8 O4' A A 107 -53.462 9.996 -45.955 1.00 30.20 O
ATOM 9 C3' A A 107 -52.468 8.948 -44.101 1.00 30.59 C
ATOM 10 O3' A A 107 -51.219 8.653 -43.431 1.00 33.63 O
ATOM 11 C2' A A 107 -53.295 10.112 -43.552 1.00 31.07 C
ATOM 12 O2' A A 107 -52.604 11.145 -42.883 1.00 34.81 O
ATOM 13 C1' A A 107 -53.984 10.640 -44.812 1.00 30.42 C
ATOM 14 N9 A A 107 -55.439 10.568 -44.867 1.00 18.37 N
ATOM 15 C8 A A 107 -56.272 9.516 -44.621 1.00 18.46 C
ATOM 16 N7 A A 107 -57.538 9.797 -44.802 1.00 18.25 N
ATOM 17 C5 A A 107 -57.532 11.128 -45.189 1.00 16.22 C
ATOM 18 C6 A A 107 -58.558 12.015 -45.545 1.00 15.02 C
ATOM 19 N6 A A 107 -59.839 11.670 -45.613 1.00 14.60 N
ATOM 20 N1 A A 107 -58.218 13.285 -45.851 1.00 14.34 N
ATOM 21 C2 A A 107 -56.924 13.619 -45.831 1.00 14.99 C
ATOM 22 N3 A A 107 -55.867 12.866 -45.543 1.00 16.98 N
ATOM 23 C4 A A 107 -56.248 11.616 -45.221 1.00 17.96 C
ATOM 24 P A A 108 -49.968 9.691 -43.474 1.00 25.62 P
ATOM 25 OP1 A A 108 -48.962 9.189 -42.495 1.00 29.41 O
ATOM 26 OP2 A A 108 -50.418 11.097 -43.381 1.00 27.25 O
ATOM 27 O5' A A 108 -49.353 9.469 -44.928 1.00 63.79 O
TER

ATOM 1 O3' G B 276 -64.991 4.486 -39.973 1.00 24.64 O
ATOM 2 P U B 277 -65.068 3.891 -41.457 1.00 25.88 P
ATOM 3 OP1 U B 277 -66.419 3.293 -41.636 1.00 25.43 O
ATOM 4 OP2 U B 277 -63.849 3.068 -41.685 1.00 22.41 O
ATOM 5 O5' U B 277 -64.976 5.182 -42.388 1.00 41.26 O
ATOM 6 C5' U B 277 -66.006 6.191 -42.338 1.00 38.93 C
ATOM 7 C4' U B 277 -65.542 7.472 -42.993 1.00 38.63 C
ATOM 8 O4' U B 277 -64.415 8.029 -42.276 1.00 38.49 O
ATOM 9 C3' U B 277 -65.045 7.393 -44.424 1.00 38.75 C
ATOM 10 O3' U B 277 -66.106 7.376 -45.344 1.00 39.69 O
ATOM 11 C2' U B 277 -64.235 8.672 -44.557 1.00 39.31 C
ATOM 12 O2' U B 277 -65.030 9.818 -44.793 1.00 39.25 O
ATOM 13 C1' U B 277 -63.620 8.789 -43.167 1.00 39.70 C
ATOM 14 N1 U B 277 -62.242 8.284 -43.167 1.00 34.68 N
ATOM 15 C2 U B 277 -61.279 9.107 -43.719 1.00 34.61 C
ATOM 16 O2 U B 277 -61.537 10.211 -44.165 1.00 34.30 O
ATOM 17 N3 U B 277 -60.010 8.597 -43.737 1.00 34.42 N
ATOM 18 C4 U B 277 -59.610 7.377 -43.266 1.00 35.84 C
ATOM 19 O4 U B 277 -58.418 7.060 -43.343 1.00 38.66 O
ATOM 20 C5 U B 277 -60.661 6.586 -42.698 1.00 35.09 C
ATOM 21 C6 U B 277 -61.910 7.058 -42.668 1.00 34.60 C
ATOM 22 P A B 278 -65.843 6.849 -46.830 1.00 33.93 P
ATOM 23 OP1 A B 278 -67.120 7.098 -47.561 1.00 37.70 O
ATOM 24 OP2 A B 278 -65.261 5.492 -46.799 1.00 36.96 O
ATOM 25 O5' A B 278 -64.728 7.826 -47.392 1.00 24.18 O
TER

Atoms:
OP1: (-52.243,5.485,-44.951)
OP2: (-54.744,5.200,-45.427)
C3': (-52.468,8.948,-44.101)
C1': (-53.984,10.640,-44.812)
C5': (-52.290,7.993,-46.453)
O4': (-53.462,9.996,-45.955)
C8: (-56.272,9.516,-44.621)
O2': (-52.604,11.145,-42.883)
C6: (-58.558,12.015,-45.545)
C5: (-57.532,11.128,-45.189)
C4: (-56.248,11.616,-45.221)
P: (-53.398,5.674,-45.854)
C4': (-52.301,9.227,-45.589)
C2': (-53.295,10.112,-43.552)
C2: (-56.924,13.619,-45.831)
N1: (-58.218,13.285,-45.851)
N3: (-55.867,12.866,-45.543)
N6: (-59.839,11.670,-45.613)
N7: (-57.538,9.797,-44.802)
N9: (-55.439,10.568,-44.867)
O5': (-53.484,7.221,-46.219)
O3': (-51.219,8.653,-43.431)
C4: (-59.610,7.377,-43.266)
N3: (-60.010,8.597,-43.737)
OP1: (-66.419,3.293,-41.636)
OP2: (-63.849,3.068,-41.685)
C2: (-61.279,9.107,-43.719)
C1': (-63.620,8.789,-43.167)
C3': (-65.045,7.393,-44.424)
O5': (-64.976,5.182,-42.388)
O4': (-64.415,8.029,-42.276)
C5': (-66.006,6.191,-42.338)
P: (-65.068,3.891,-41.457)
C4': (-65.542,7.472,-42.993)
C2': (-64.235,8.672,-44.557)
O2': (-65.030,9.818,-44.793)
N1: (-62.242,8.284,-43.167)
O4: (-58.418,7.060,-43.343)
O2: (-61.537,10.211,-44.165)
C6: (-61.910,7.058,-42.668)
C5: (-60.661,6.586,-42.698)
O3': (-66.106,7.376,-45.344)
Image (generated by PyMOL):
PyMOL image
show in jmol