Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11062:11061
Extra
PDB:
ATOM 1 O3' G A1061 41.395 -18.472 50.942 1.00 30.29 O
ATOM 2 P C A1062 40.495 -18.553 49.617 1.00 28.37 P
ATOM 3 OP1 C A1062 39.213 -17.944 50.000 1.00 28.32 O
ATOM 4 OP2 C A1062 40.515 -19.947 49.125 1.00 28.52 O
ATOM 5 O5' C A1062 41.269 -17.585 48.583 1.00 28.41 O
ATOM 6 C5' C A1062 41.039 -16.177 48.610 1.00 28.33 C
ATOM 7 C4' C A1062 42.054 -15.415 47.825 1.00 28.37 C
ATOM 8 O4' C A1062 43.407 -15.819 48.205 1.00 28.33 O
ATOM 9 C3' C A1062 42.027 -15.623 46.335 1.00 28.55 C
ATOM 10 O3' C A1062 40.992 -14.906 45.711 1.00 28.62 O
ATOM 11 C2' C A1062 43.445 -15.186 45.929 1.00 28.57 C
ATOM 12 O2' C A1062 43.589 -13.770 46.021 1.00 28.49 O
ATOM 13 C1' C A1062 44.253 -15.801 47.062 1.00 28.45 C
ATOM 14 N1 C A1062 44.661 -17.191 46.761 1.00 28.57 N
ATOM 15 C2 C A1062 45.755 -17.408 45.900 1.00 28.69 C
ATOM 16 O2 C A1062 46.279 -16.398 45.417 1.00 28.69 O
ATOM 17 N3 C A1062 46.217 -18.656 45.591 1.00 28.81 N
ATOM 18 C4 C A1062 45.600 -19.658 46.154 1.00 28.81 C
ATOM 19 N4 C A1062 46.014 -20.842 45.846 1.00 28.95 N
ATOM 20 C5 C A1062 44.502 -19.479 47.033 1.00 28.69 C
ATOM 21 C6 C A1062 44.041 -18.252 47.326 1.00 28.57 C
ATOM 22 P C A1063 40.339 -15.416 44.325 1.00 31.63 P
ATOM 23 OP1 C A1063 39.226 -14.490 44.021 1.00 31.66 O
ATOM 24 OP2 C A1063 40.041 -16.874 44.439 1.00 31.70 O
ATOM 25 O5' C A1063 41.527 -15.189 43.306 1.00 31.74 O
TER
ATOM 1 O3' G B1060 41.689 -19.760 55.389 1.00 32.02 O
ATOM 2 P G B1061 41.163 -21.126 54.786 1.00 30.16 P
ATOM 3 OP1 G B1061 39.817 -21.194 55.140 1.00 30.16 O
ATOM 4 OP2 G B1061 42.065 -22.244 55.194 1.00 30.22 O
ATOM 5 O5' G B1061 41.274 -20.915 53.236 1.00 30.27 O
ATOM 6 C5' G B1061 42.531 -20.954 52.609 1.00 30.31 C
ATOM 7 C4' G B1061 43.004 -19.562 52.376 1.00 30.22 C
ATOM 8 O4' G B1061 44.424 -19.491 52.519 1.00 30.20 O
ATOM 9 C3' G B1061 42.712 -18.980 51.003 1.00 30.31 C
ATOM 10 O3' G B1061 41.395 -18.472 50.942 1.00 30.29 O
ATOM 11 C2' G B1061 43.745 -17.891 50.914 1.00 30.24 C
ATOM 12 O2' G B1061 43.328 -16.796 51.703 1.00 30.10 O
ATOM 13 C1' G B1061 44.933 -18.557 51.608 1.00 30.22 C
ATOM 14 N9 G B1061 45.775 -19.282 50.671 1.00 30.36 N
ATOM 15 C8 G B1061 45.891 -20.613 50.605 1.00 30.47 C
ATOM 16 N7 G B1061 46.735 -20.919 49.689 1.00 30.59 N
ATOM 17 C5 G B1061 47.172 -19.729 49.164 1.00 30.55 C
ATOM 18 C6 G B1061 48.083 -19.443 48.162 1.00 30.65 C
ATOM 19 O6 G B1061 48.726 -20.227 47.492 1.00 30.80 O
ATOM 20 N1 G B1061 48.235 -18.112 47.947 1.00 30.58 N
ATOM 21 C2 G B1061 47.603 -17.146 48.646 1.00 30.44 C
ATOM 22 N2 G B1061 47.888 -15.892 48.306 1.00 30.41 N
ATOM 23 N3 G B1061 46.747 -17.390 49.606 1.00 30.34 N
ATOM 24 C4 G B1061 46.597 -18.702 49.786 1.00 30.41 C
ATOM 25 P C B1062 40.495 -18.553 49.617 1.00 28.37 P
ATOM 26 OP1 C B1062 39.213 -17.944 50.000 1.00 28.32 O
ATOM 27 OP2 C B1062 40.515 -19.947 49.125 1.00 28.52 O
ATOM 28 O5' C B1062 41.269 -17.585 48.583 1.00 28.41 O
TER
ATOM 2 P C A1062 40.495 -18.553 49.617 1.00 28.37 P
ATOM 3 OP1 C A1062 39.213 -17.944 50.000 1.00 28.32 O
ATOM 4 OP2 C A1062 40.515 -19.947 49.125 1.00 28.52 O
ATOM 5 O5' C A1062 41.269 -17.585 48.583 1.00 28.41 O
ATOM 6 C5' C A1062 41.039 -16.177 48.610 1.00 28.33 C
ATOM 7 C4' C A1062 42.054 -15.415 47.825 1.00 28.37 C
ATOM 8 O4' C A1062 43.407 -15.819 48.205 1.00 28.33 O
ATOM 9 C3' C A1062 42.027 -15.623 46.335 1.00 28.55 C
ATOM 10 O3' C A1062 40.992 -14.906 45.711 1.00 28.62 O
ATOM 11 C2' C A1062 43.445 -15.186 45.929 1.00 28.57 C
ATOM 12 O2' C A1062 43.589 -13.770 46.021 1.00 28.49 O
ATOM 13 C1' C A1062 44.253 -15.801 47.062 1.00 28.45 C
ATOM 14 N1 C A1062 44.661 -17.191 46.761 1.00 28.57 N
ATOM 15 C2 C A1062 45.755 -17.408 45.900 1.00 28.69 C
ATOM 16 O2 C A1062 46.279 -16.398 45.417 1.00 28.69 O
ATOM 17 N3 C A1062 46.217 -18.656 45.591 1.00 28.81 N
ATOM 18 C4 C A1062 45.600 -19.658 46.154 1.00 28.81 C
ATOM 19 N4 C A1062 46.014 -20.842 45.846 1.00 28.95 N
ATOM 20 C5 C A1062 44.502 -19.479 47.033 1.00 28.69 C
ATOM 21 C6 C A1062 44.041 -18.252 47.326 1.00 28.57 C
ATOM 22 P C A1063 40.339 -15.416 44.325 1.00 31.63 P
ATOM 23 OP1 C A1063 39.226 -14.490 44.021 1.00 31.66 O
ATOM 24 OP2 C A1063 40.041 -16.874 44.439 1.00 31.70 O
ATOM 25 O5' C A1063 41.527 -15.189 43.306 1.00 31.74 O
TER
ATOM 1 O3' G B1060 41.689 -19.760 55.389 1.00 32.02 O
ATOM 2 P G B1061 41.163 -21.126 54.786 1.00 30.16 P
ATOM 3 OP1 G B1061 39.817 -21.194 55.140 1.00 30.16 O
ATOM 4 OP2 G B1061 42.065 -22.244 55.194 1.00 30.22 O
ATOM 5 O5' G B1061 41.274 -20.915 53.236 1.00 30.27 O
ATOM 6 C5' G B1061 42.531 -20.954 52.609 1.00 30.31 C
ATOM 7 C4' G B1061 43.004 -19.562 52.376 1.00 30.22 C
ATOM 8 O4' G B1061 44.424 -19.491 52.519 1.00 30.20 O
ATOM 9 C3' G B1061 42.712 -18.980 51.003 1.00 30.31 C
ATOM 10 O3' G B1061 41.395 -18.472 50.942 1.00 30.29 O
ATOM 11 C2' G B1061 43.745 -17.891 50.914 1.00 30.24 C
ATOM 12 O2' G B1061 43.328 -16.796 51.703 1.00 30.10 O
ATOM 13 C1' G B1061 44.933 -18.557 51.608 1.00 30.22 C
ATOM 14 N9 G B1061 45.775 -19.282 50.671 1.00 30.36 N
ATOM 15 C8 G B1061 45.891 -20.613 50.605 1.00 30.47 C
ATOM 16 N7 G B1061 46.735 -20.919 49.689 1.00 30.59 N
ATOM 17 C5 G B1061 47.172 -19.729 49.164 1.00 30.55 C
ATOM 18 C6 G B1061 48.083 -19.443 48.162 1.00 30.65 C
ATOM 19 O6 G B1061 48.726 -20.227 47.492 1.00 30.80 O
ATOM 20 N1 G B1061 48.235 -18.112 47.947 1.00 30.58 N
ATOM 21 C2 G B1061 47.603 -17.146 48.646 1.00 30.44 C
ATOM 22 N2 G B1061 47.888 -15.892 48.306 1.00 30.41 N
ATOM 23 N3 G B1061 46.747 -17.390 49.606 1.00 30.34 N
ATOM 24 C4 G B1061 46.597 -18.702 49.786 1.00 30.41 C
ATOM 25 P C B1062 40.495 -18.553 49.617 1.00 28.37 P
ATOM 26 OP1 C B1062 39.213 -17.944 50.000 1.00 28.32 O
ATOM 27 OP2 C B1062 40.515 -19.947 49.125 1.00 28.52 O
ATOM 28 O5' C B1062 41.269 -17.585 48.583 1.00 28.41 O
TER
Atoms:
C2: (45.755,-17.408,45.900)
OP1: (39.213,-17.944,50.000)
OP2: (40.515,-19.947,49.125)
C4: (45.600,-19.658,46.154)
O5': (41.269,-17.585,48.583)
C3': (42.027,-15.623,46.335)
C1': (44.253,-15.801,47.062)
O4': (43.407,-15.819,48.205)
C5': (41.039,-16.177,48.610)
P: (40.495,-18.553,49.617)
O2: (46.279,-16.398,45.417)
C4': (42.054,-15.415,47.825)
C2': (43.445,-15.186,45.929)
O2': (43.589,-13.770,46.021)
N1: (44.661,-17.191,46.761)
N3: (46.217,-18.656,45.591)
N4: (46.014,-20.842,45.846)
C6: (44.041,-18.252,47.326)
C5: (44.502,-19.479,47.033)
O3': (40.992,-14.906,45.711)
OP1: (39.213,-17.944,50.000)
OP2: (40.515,-19.947,49.125)
C4: (45.600,-19.658,46.154)
O5': (41.269,-17.585,48.583)
C3': (42.027,-15.623,46.335)
C1': (44.253,-15.801,47.062)
O4': (43.407,-15.819,48.205)
C5': (41.039,-16.177,48.610)
P: (40.495,-18.553,49.617)
O2: (46.279,-16.398,45.417)
C4': (42.054,-15.415,47.825)
C2': (43.445,-15.186,45.929)
O2': (43.589,-13.770,46.021)
N1: (44.661,-17.191,46.761)
N3: (46.217,-18.656,45.591)
N4: (46.014,-20.842,45.846)
C6: (44.041,-18.252,47.326)
C5: (44.502,-19.479,47.033)
O3': (40.992,-14.906,45.711)
OP1: (39.817,-21.194,55.140)
OP2: (42.065,-22.244,55.194)
C3': (42.712,-18.980,51.003)
C1': (44.933,-18.557,51.608)
C5': (42.531,-20.954,52.609)
O6: (48.726,-20.227,47.492)
O4': (44.424,-19.491,52.519)
C8: (45.891,-20.613,50.605)
C2: (47.603,-17.146,48.646)
C6: (48.083,-19.443,48.162)
C5: (47.172,-19.729,49.164)
C4: (46.597,-18.702,49.786)
P: (41.163,-21.126,54.786)
C4': (43.004,-19.562,52.376)
C2': (43.745,-17.891,50.914)
O2': (43.328,-16.796,51.703)
N1: (48.235,-18.112,47.947)
N2: (47.888,-15.892,48.306)
N3: (46.747,-17.390,49.606)
N7: (46.735,-20.919,49.689)
N9: (45.775,-19.282,50.671)
O5': (41.274,-20.915,53.236)
O3': (41.395,-18.472,50.942)
OP2: (42.065,-22.244,55.194)
C3': (42.712,-18.980,51.003)
C1': (44.933,-18.557,51.608)
C5': (42.531,-20.954,52.609)
O6: (48.726,-20.227,47.492)
O4': (44.424,-19.491,52.519)
C8: (45.891,-20.613,50.605)
C2: (47.603,-17.146,48.646)
C6: (48.083,-19.443,48.162)
C5: (47.172,-19.729,49.164)
C4: (46.597,-18.702,49.786)
P: (41.163,-21.126,54.786)
C4': (43.004,-19.562,52.376)
C2': (43.745,-17.891,50.914)
O2': (43.328,-16.796,51.703)
N1: (48.235,-18.112,47.947)
N2: (47.888,-15.892,48.306)
N3: (46.747,-17.390,49.606)
N7: (46.735,-20.919,49.689)
N9: (45.775,-19.282,50.671)
O5': (41.274,-20.915,53.236)
O3': (41.395,-18.472,50.942)
Image (generated by PyMOL):