ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 364D:C5:C6

Extra

PDB:
ATOM 1 O3' A A 4 -4.377 58.232 24.430 1.00113.56 O
ATOM 2 P U A 5 -4.476 57.068 25.536 1.00115.29 P
ATOM 3 OP1 U A 5 -5.560 57.439 26.481 1.00115.21 O
ATOM 4 OP2 U A 5 -3.101 56.811 26.044 1.00113.07 O
ATOM 5 O5' U A 5 -4.916 55.789 24.701 1.00114.78 O
ATOM 6 C5' U A 5 -6.017 55.878 23.796 1.00115.44 C
ATOM 7 C4' U A 5 -5.741 55.095 22.539 1.00114.91 C
ATOM 8 O4' U A 5 -4.449 55.475 21.999 1.00113.66 O
ATOM 9 C3' U A 5 -5.607 53.596 22.741 1.00115.44 C
ATOM 10 O3' U A 5 -6.875 52.972 22.762 1.00116.52 O
ATOM 11 C2' U A 5 -4.777 53.160 21.542 1.00114.18 C
ATOM 12 O2' U A 5 -5.504 52.989 20.341 1.00115.50 O
ATOM 13 C1' U A 5 -3.857 54.356 21.373 1.00112.57 C
ATOM 14 N1 U A 5 -2.529 54.102 21.921 1.00110.01 N
ATOM 15 C2 U A 5 -1.749 53.265 21.173 1.00110.49 C
ATOM 16 O2 U A 5 -2.148 52.766 20.132 1.00107.38 O
ATOM 17 N3 U A 5 -0.497 53.028 21.676 1.00113.09 N
ATOM 18 C4 U A 5 0.039 53.540 22.838 1.00115.14 C
ATOM 19 O4 U A 5 1.196 53.238 23.153 1.00114.77 O
ATOM 20 C5 U A 5 -0.846 54.410 23.570 1.00115.46 C
ATOM 21 C6 U A 5 -2.076 54.652 23.092 1.00112.39 C
ATOM 22 P G A 6 -7.104 51.684 23.691 1.00116.73 P
ATOM 23 OP1 G A 6 -8.164 50.887 22.999 1.00117.37 O
ATOM 24 OP2 G A 6 -7.309 52.133 25.095 1.00116.75 O
ATOM 25 O5' G A 6 -5.709 50.910 23.635 1.00111.90 O
TER

ATOM 1 O3' U B 5 -6.875 52.972 22.762 1.00116.52 O
ATOM 2 P G B 6 -7.104 51.684 23.691 1.00116.73 P
ATOM 3 OP1 G B 6 -8.164 50.887 22.999 1.00117.37 O
ATOM 4 OP2 G B 6 -7.309 52.133 25.095 1.00116.75 O
ATOM 5 O5' G B 6 -5.709 50.910 23.635 1.00111.90 O
ATOM 6 C5' G B 6 -5.670 49.489 23.441 1.00106.71 C
ATOM 7 C4' G B 6 -6.075 49.138 22.018 1.00103.17 C
ATOM 8 O4' G B 6 -5.297 49.913 21.070 1.00103.29 O
ATOM 9 C3' G B 6 -5.880 47.693 21.602 1.00 99.40 C
ATOM 10 O3' G B 6 -6.933 46.863 22.053 1.00 92.91 O
ATOM 11 C2' G B 6 -5.740 47.799 20.091 1.00 99.03 C
ATOM 12 O2' G B 6 -6.996 47.925 19.459 1.00 97.87 O
ATOM 13 C1' G B 6 -4.935 49.101 19.962 1.00 99.82 C
ATOM 14 N9 G B 6 -3.505 48.840 20.124 1.00 97.12 N
ATOM 15 C8 G B 6 -2.670 49.454 21.028 1.00 94.96 C
ATOM 16 N7 G B 6 -1.454 48.994 20.997 1.00 92.92 N
ATOM 17 C5 G B 6 -1.477 48.031 20.006 1.00 92.59 C
ATOM 18 C6 G B 6 -0.454 47.209 19.532 1.00 92.44 C
ATOM 19 O6 G B 6 0.721 47.174 19.890 1.00 94.00 O
ATOM 20 N1 G B 6 -0.901 46.360 18.531 1.00 93.05 N
ATOM 21 C2 G B 6 -2.175 46.325 18.043 1.00 94.50 C
ATOM 22 N2 G B 6 -2.412 45.431 17.077 1.00 96.86 N
ATOM 23 N3 G B 6 -3.149 47.104 18.471 1.00 95.77 N
ATOM 24 C4 G B 6 -2.733 47.926 19.451 1.00 94.91 C
ATOM 25 P C B 7 -6.582 45.652 23.035 1.00 87.51 P
ATOM 26 OP1 C B 7 -7.822 44.973 23.486 1.00 86.66 O
ATOM 27 OP2 C B 7 -5.637 46.200 24.037 1.00 87.22 O
ATOM 28 O5' C B 7 -5.756 44.676 22.095 1.00 86.27 O
TER

Atoms:
C4: (0.039,53.540,22.838)
N3: (-0.497,53.028,21.676)
OP1: (-5.560,57.439,26.481)
OP2: (-3.101,56.811,26.044)
C2: (-1.749,53.265,21.173)
C1': (-3.857,54.356,21.373)
C3': (-5.607,53.596,22.741)
O5': (-4.916,55.789,24.701)
O4': (-4.449,55.475,21.999)
C5': (-6.017,55.878,23.796)
P: (-4.476,57.068,25.536)
C4': (-5.741,55.095,22.539)
C2': (-4.777,53.160,21.542)
O2': (-5.504,52.989,20.341)
N1: (-2.529,54.102,21.921)
O4: (1.196,53.238,23.153)
O2: (-2.148,52.766,20.132)
C6: (-2.076,54.652,23.092)
C5: (-0.846,54.410,23.570)
O3': (-6.875,52.972,22.762)
OP1: (-8.164,50.887,22.999)
OP2: (-7.309,52.133,25.095)
C3': (-5.880,47.693,21.602)
C1': (-4.935,49.101,19.962)
C5': (-5.670,49.489,23.441)
O6: (0.721,47.174,19.890)
O4': (-5.297,49.913,21.070)
C8: (-2.670,49.454,21.028)
C2: (-2.175,46.325,18.043)
C6: (-0.454,47.209,19.532)
C5: (-1.477,48.031,20.006)
C4: (-2.733,47.926,19.451)
P: (-7.104,51.684,23.691)
C4': (-6.075,49.138,22.018)
C2': (-5.740,47.799,20.091)
O2': (-6.996,47.925,19.459)
N1: (-0.901,46.360,18.531)
N2: (-2.412,45.431,17.077)
N3: (-3.149,47.104,18.471)
N7: (-1.454,48.994,20.997)
N9: (-3.505,48.840,20.124)
O5': (-5.709,50.910,23.635)
O3': (-6.933,46.863,22.053)
Image (generated by PyMOL):
PyMOL image
show in jmol