ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1835:A1836

Extra

PDB:
ATOM 1 O3' A A1834 98.133 4.440 2.380 1.00 57.90 O
ATOM 2 P C A1835 99.012 4.295 1.037 1.00 60.19 P
ATOM 3 OP1 C A1835 98.500 5.216 -0.017 1.00 65.86 O
ATOM 4 OP2 C A1835 99.135 2.849 0.740 1.00 55.83 O
ATOM 5 O5' C A1835 100.454 4.785 1.495 1.00 60.95 O
ATOM 6 C5' C A1835 100.730 6.151 1.771 1.00 56.58 C
ATOM 7 C4' C A1835 102.221 6.369 1.793 1.00 57.28 C
ATOM 8 O4' C A1835 102.774 5.764 2.992 1.00 61.87 O
ATOM 9 C3' C A1835 102.972 5.722 0.636 1.00 55.36 C
ATOM 10 O3' C A1835 103.063 6.558 -0.512 1.00 56.67 O
ATOM 11 C2' C A1835 104.335 5.433 1.243 1.00 55.43 C
ATOM 12 O2' C A1835 105.140 6.588 1.267 1.00 48.89 O
ATOM 13 C1' C A1835 103.947 5.031 2.666 1.00 63.20 C
ATOM 14 N1 C A1835 103.590 3.597 2.747 1.00 61.02 N
ATOM 15 C2 C A1835 104.553 2.594 2.453 1.00 59.35 C
ATOM 16 O2 C A1835 105.734 2.918 2.213 1.00 59.42 O
ATOM 17 N3 C A1835 104.155 1.298 2.449 1.00 60.06 N
ATOM 18 C4 C A1835 102.880 0.984 2.732 1.00 62.17 C
ATOM 19 N4 C A1835 102.509 -0.301 2.675 1.00 59.63 N
ATOM 20 C5 C A1835 101.917 1.971 3.077 1.00 64.75 C
ATOM 21 C6 C A1835 102.311 3.245 3.074 1.00 60.01 C
ATOM 22 P G A1836 103.176 5.897 -1.979 1.00 51.09 P
ATOM 23 OP1 G A1836 102.835 6.910 -3.013 1.00 53.14 O
ATOM 24 OP2 G A1836 102.431 4.608 -1.946 1.00 54.00 O
ATOM 25 O5' G A1836 104.727 5.576 -2.136 1.00 52.83 O
TER

ATOM 1 O3' C B1835 103.063 6.558 -0.512 1.00 56.67 O
ATOM 2 P G B1836 103.176 5.897 -1.979 1.00 51.09 P
ATOM 3 OP1 G B1836 102.835 6.910 -3.013 1.00 53.14 O
ATOM 4 OP2 G B1836 102.431 4.608 -1.946 1.00 54.00 O
ATOM 5 O5' G B1836 104.727 5.576 -2.136 1.00 52.83 O
ATOM 6 C5' G B1836 105.682 6.585 -1.899 1.00 49.56 C
ATOM 7 C4' G B1836 107.050 5.981 -1.779 1.00 51.30 C
ATOM 8 O4' G B1836 107.036 5.037 -0.679 1.00 57.96 O
ATOM 9 C3' G B1836 107.524 5.142 -2.945 1.00 50.85 C
ATOM 10 O3' G B1836 108.057 5.843 -4.044 1.00 54.85 O
ATOM 11 C2' G B1836 108.589 4.280 -2.305 1.00 58.25 C
ATOM 12 O2' G B1836 109.841 4.938 -2.217 1.00 60.76 O
ATOM 13 C1' G B1836 107.957 3.992 -0.942 1.00 59.11 C
ATOM 14 N9 G B1836 107.228 2.729 -1.035 1.00 60.42 N
ATOM 15 C8 G B1836 105.900 2.487 -0.789 1.00 59.70 C
ATOM 16 N7 G B1836 105.557 1.250 -1.029 1.00 59.71 N
ATOM 17 C5 G B1836 106.730 0.642 -1.441 1.00 59.64 C
ATOM 18 C6 G B1836 106.985 -0.689 -1.832 1.00 62.40 C
ATOM 19 O6 G B1836 106.203 -1.638 -1.893 1.00 65.65 O
ATOM 20 N1 G B1836 108.315 -0.873 -2.173 1.00 63.12 N
ATOM 21 C2 G B1836 109.279 0.101 -2.141 1.00 64.48 C
ATOM 22 N2 G B1836 110.512 -0.264 -2.501 1.00 68.74 N
ATOM 23 N3 G B1836 109.055 1.340 -1.780 1.00 59.51 N
ATOM 24 C4 G B1836 107.768 1.538 -1.442 1.00 59.41 C
ATOM 25 P G B1837 107.927 5.186 -5.508 1.00 62.51 P
ATOM 26 OP1 G B1837 108.259 6.229 -6.521 1.00 56.81 O
ATOM 27 OP2 G B1837 106.610 4.486 -5.572 1.00 50.77 O
ATOM 28 O5' G B1837 109.054 4.061 -5.542 1.00 56.07 O
TER

Atoms:
C2: (104.553,2.594,2.453)
OP1: (98.500,5.216,-0.017)
OP2: (99.135,2.849,0.740)
C4: (102.880,0.984,2.732)
O5': (100.454,4.785,1.495)
C3': (102.972,5.722,0.636)
C1': (103.947,5.031,2.666)
O4': (102.774,5.764,2.992)
C5': (100.730,6.151,1.771)
P: (99.012,4.295,1.037)
O2: (105.734,2.918,2.213)
C4': (102.221,6.369,1.793)
C2': (104.335,5.433,1.243)
O2': (105.140,6.588,1.267)
N1: (103.590,3.597,2.747)
N3: (104.155,1.298,2.449)
N4: (102.509,-0.301,2.675)
C6: (102.311,3.245,3.074)
C5: (101.917,1.971,3.077)
O3': (103.063,6.558,-0.512)
OP1: (102.835,6.910,-3.013)
OP2: (102.431,4.608,-1.946)
C3': (107.524,5.142,-2.945)
C1': (107.957,3.992,-0.942)
C5': (105.682,6.585,-1.899)
O6: (106.203,-1.638,-1.893)
O4': (107.036,5.037,-0.679)
C8: (105.900,2.487,-0.789)
C2: (109.279,0.101,-2.141)
C6: (106.985,-0.689,-1.832)
C5: (106.730,0.642,-1.441)
C4: (107.768,1.538,-1.442)
P: (103.176,5.897,-1.979)
C4': (107.050,5.981,-1.779)
C2': (108.589,4.280,-2.305)
O2': (109.841,4.938,-2.217)
N1: (108.315,-0.873,-2.173)
N2: (110.512,-0.264,-2.501)
N3: (109.055,1.340,-1.780)
N7: (105.557,1.250,-1.029)
N9: (107.228,2.729,-1.035)
O5': (104.727,5.576,-2.136)
O3': (108.057,5.843,-4.044)
Image (generated by PyMOL):
PyMOL image
show in jmol