Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1TRA:A12:A13
Extra
PDB:
ATOM 1 O3' U A 11 37.638 -5.465 29.565 1.00 9.51 O
ATOM 2 P C A 12 38.447 -5.008 30.869 1.00 8.91 P
ATOM 3 OP1 C A 12 39.114 -6.144 31.587 1.00 15.87 O
ATOM 4 OP2 C A 12 37.411 -4.366 31.726 1.00 8.90 O
ATOM 5 O5' C A 12 39.543 -4.013 30.277 1.00 9.43 O
ATOM 6 C5' C A 12 40.634 -3.676 31.184 1.00 9.70 C
ATOM 7 C4' C A 12 41.884 -3.640 30.315 1.00 11.30 C
ATOM 8 O4' C A 12 41.573 -3.090 29.042 1.00 16.02 O
ATOM 9 C3' C A 12 43.000 -2.757 30.863 1.00 9.59 C
ATOM 10 O3' C A 12 43.771 -3.407 31.877 1.00 10.87 O
ATOM 11 C2' C A 12 43.798 -2.458 29.597 1.00 9.57 C
ATOM 12 O2' C A 12 44.617 -3.596 29.382 1.00 7.25 O
ATOM 13 C1' C A 12 42.708 -2.351 28.545 1.00 13.99 C
ATOM 14 N1 C A 12 42.374 -0.939 28.267 1.00 7.99 N
ATOM 15 C2 C A 12 43.358 -0.190 27.631 1.00 11.65 C
ATOM 16 O2 C A 12 44.441 -0.689 27.322 1.00 18.33 O
ATOM 17 N3 C A 12 43.086 1.122 27.360 1.00 6.65 N
ATOM 18 C4 C A 12 41.891 1.688 27.694 1.00 14.76 C
ATOM 19 N4 C A 12 41.686 2.977 27.398 1.00 12.29 N
ATOM 20 C5 C A 12 40.889 0.912 28.343 1.00 10.55 C
ATOM 21 C6 C A 12 41.179 -0.373 28.601 1.00 6.81 C
ATOM 22 P A A 13 44.671 -2.531 32.885 1.00 23.59 P
ATOM 23 OP1 A A 13 45.313 -3.363 33.950 1.00 22.41 O
ATOM 24 OP2 A A 13 43.687 -1.568 33.446 1.00 18.23 O
ATOM 25 O5' A A 13 45.781 -1.925 31.915 1.00 15.28 O
TER
ATOM 1 O3' C B 12 43.771 -3.407 31.877 1.00 10.87 O
ATOM 2 P A B 13 44.671 -2.531 32.885 1.00 23.59 P
ATOM 3 OP1 A B 13 45.313 -3.363 33.950 1.00 22.41 O
ATOM 4 OP2 A B 13 43.687 -1.568 33.446 1.00 18.23 O
ATOM 5 O5' A B 13 45.781 -1.925 31.915 1.00 15.28 O
ATOM 6 C5' A B 13 46.869 -1.149 32.482 1.00 9.21 C
ATOM 7 C4' A B 13 47.941 -1.049 31.411 1.00 5.13 C
ATOM 8 O4' A B 13 47.395 -0.696 30.164 1.00 10.50 O
ATOM 9 C3' A B 13 48.980 0.040 31.695 1.00 0.00 C
ATOM 10 O3' A B 13 49.926 -0.416 32.665 1.00 3.02 O
ATOM 11 C2' A B 13 49.561 0.313 30.315 1.00 0.00 C
ATOM 12 O2' A B 13 50.521 -0.683 30.000 1.00 0.00 O
ATOM 13 C1' A B 13 48.324 0.137 29.433 1.00 10.28 C
ATOM 14 N9 A B 13 47.733 1.429 29.067 1.00 5.93 N
ATOM 15 C8 A B 13 46.449 1.865 29.269 1.00 2.32 C
ATOM 16 N7 A B 13 46.228 3.074 28.809 1.00 6.83 N
ATOM 17 C5 A B 13 47.447 3.457 28.267 1.00 0.00 C
ATOM 18 C6 A B 13 47.855 4.649 27.619 1.00 13.29 C
ATOM 19 N6 A B 13 47.056 5.691 27.411 1.00 12.00 N
ATOM 20 N1 A B 13 49.168 4.672 27.209 1.00 8.25 N
ATOM 21 C2 A B 13 49.996 3.613 27.411 1.00 6.06 C
ATOM 22 N3 A B 13 49.678 2.468 28.009 1.00 8.88 N
ATOM 23 C4 A B 13 48.382 2.454 28.412 1.00 2.33 C
ATOM 24 P G B 14 49.781 0.230 34.145 1.00 6.51 P
ATOM 25 OP1 G B 14 50.513 -0.553 35.172 1.00 3.20 O
ATOM 26 OP2 G B 14 48.307 0.233 34.334 1.00 1.60 O
ATOM 27 O5' G B 14 50.466 1.655 33.843 1.00 5.07 O
TER
ATOM 2 P C A 12 38.447 -5.008 30.869 1.00 8.91 P
ATOM 3 OP1 C A 12 39.114 -6.144 31.587 1.00 15.87 O
ATOM 4 OP2 C A 12 37.411 -4.366 31.726 1.00 8.90 O
ATOM 5 O5' C A 12 39.543 -4.013 30.277 1.00 9.43 O
ATOM 6 C5' C A 12 40.634 -3.676 31.184 1.00 9.70 C
ATOM 7 C4' C A 12 41.884 -3.640 30.315 1.00 11.30 C
ATOM 8 O4' C A 12 41.573 -3.090 29.042 1.00 16.02 O
ATOM 9 C3' C A 12 43.000 -2.757 30.863 1.00 9.59 C
ATOM 10 O3' C A 12 43.771 -3.407 31.877 1.00 10.87 O
ATOM 11 C2' C A 12 43.798 -2.458 29.597 1.00 9.57 C
ATOM 12 O2' C A 12 44.617 -3.596 29.382 1.00 7.25 O
ATOM 13 C1' C A 12 42.708 -2.351 28.545 1.00 13.99 C
ATOM 14 N1 C A 12 42.374 -0.939 28.267 1.00 7.99 N
ATOM 15 C2 C A 12 43.358 -0.190 27.631 1.00 11.65 C
ATOM 16 O2 C A 12 44.441 -0.689 27.322 1.00 18.33 O
ATOM 17 N3 C A 12 43.086 1.122 27.360 1.00 6.65 N
ATOM 18 C4 C A 12 41.891 1.688 27.694 1.00 14.76 C
ATOM 19 N4 C A 12 41.686 2.977 27.398 1.00 12.29 N
ATOM 20 C5 C A 12 40.889 0.912 28.343 1.00 10.55 C
ATOM 21 C6 C A 12 41.179 -0.373 28.601 1.00 6.81 C
ATOM 22 P A A 13 44.671 -2.531 32.885 1.00 23.59 P
ATOM 23 OP1 A A 13 45.313 -3.363 33.950 1.00 22.41 O
ATOM 24 OP2 A A 13 43.687 -1.568 33.446 1.00 18.23 O
ATOM 25 O5' A A 13 45.781 -1.925 31.915 1.00 15.28 O
TER
ATOM 1 O3' C B 12 43.771 -3.407 31.877 1.00 10.87 O
ATOM 2 P A B 13 44.671 -2.531 32.885 1.00 23.59 P
ATOM 3 OP1 A B 13 45.313 -3.363 33.950 1.00 22.41 O
ATOM 4 OP2 A B 13 43.687 -1.568 33.446 1.00 18.23 O
ATOM 5 O5' A B 13 45.781 -1.925 31.915 1.00 15.28 O
ATOM 6 C5' A B 13 46.869 -1.149 32.482 1.00 9.21 C
ATOM 7 C4' A B 13 47.941 -1.049 31.411 1.00 5.13 C
ATOM 8 O4' A B 13 47.395 -0.696 30.164 1.00 10.50 O
ATOM 9 C3' A B 13 48.980 0.040 31.695 1.00 0.00 C
ATOM 10 O3' A B 13 49.926 -0.416 32.665 1.00 3.02 O
ATOM 11 C2' A B 13 49.561 0.313 30.315 1.00 0.00 C
ATOM 12 O2' A B 13 50.521 -0.683 30.000 1.00 0.00 O
ATOM 13 C1' A B 13 48.324 0.137 29.433 1.00 10.28 C
ATOM 14 N9 A B 13 47.733 1.429 29.067 1.00 5.93 N
ATOM 15 C8 A B 13 46.449 1.865 29.269 1.00 2.32 C
ATOM 16 N7 A B 13 46.228 3.074 28.809 1.00 6.83 N
ATOM 17 C5 A B 13 47.447 3.457 28.267 1.00 0.00 C
ATOM 18 C6 A B 13 47.855 4.649 27.619 1.00 13.29 C
ATOM 19 N6 A B 13 47.056 5.691 27.411 1.00 12.00 N
ATOM 20 N1 A B 13 49.168 4.672 27.209 1.00 8.25 N
ATOM 21 C2 A B 13 49.996 3.613 27.411 1.00 6.06 C
ATOM 22 N3 A B 13 49.678 2.468 28.009 1.00 8.88 N
ATOM 23 C4 A B 13 48.382 2.454 28.412 1.00 2.33 C
ATOM 24 P G B 14 49.781 0.230 34.145 1.00 6.51 P
ATOM 25 OP1 G B 14 50.513 -0.553 35.172 1.00 3.20 O
ATOM 26 OP2 G B 14 48.307 0.233 34.334 1.00 1.60 O
ATOM 27 O5' G B 14 50.466 1.655 33.843 1.00 5.07 O
TER
Atoms:
C2: (43.358,-0.190,27.631)
OP1: (39.114,-6.144,31.587)
OP2: (37.411,-4.366,31.726)
C4: (41.891,1.688,27.694)
O5': (39.543,-4.013,30.277)
C3': (43.000,-2.757,30.863)
C1': (42.708,-2.351,28.545)
O4': (41.573,-3.090,29.042)
C5': (40.634,-3.676,31.184)
P: (38.447,-5.008,30.869)
O2: (44.441,-0.689,27.322)
C4': (41.884,-3.640,30.315)
C2': (43.798,-2.458,29.597)
O2': (44.617,-3.596,29.382)
N1: (42.374,-0.939,28.267)
N3: (43.086,1.122,27.360)
N4: (41.686,2.977,27.398)
C6: (41.179,-0.373,28.601)
C5: (40.889,0.912,28.343)
O3': (43.771,-3.407,31.877)
OP1: (39.114,-6.144,31.587)
OP2: (37.411,-4.366,31.726)
C4: (41.891,1.688,27.694)
O5': (39.543,-4.013,30.277)
C3': (43.000,-2.757,30.863)
C1': (42.708,-2.351,28.545)
O4': (41.573,-3.090,29.042)
C5': (40.634,-3.676,31.184)
P: (38.447,-5.008,30.869)
O2: (44.441,-0.689,27.322)
C4': (41.884,-3.640,30.315)
C2': (43.798,-2.458,29.597)
O2': (44.617,-3.596,29.382)
N1: (42.374,-0.939,28.267)
N3: (43.086,1.122,27.360)
N4: (41.686,2.977,27.398)
C6: (41.179,-0.373,28.601)
C5: (40.889,0.912,28.343)
O3': (43.771,-3.407,31.877)
OP1: (45.313,-3.363,33.950)
OP2: (43.687,-1.568,33.446)
C3': (48.980,0.040,31.695)
C1': (48.324,0.137,29.433)
C5': (46.869,-1.149,32.482)
O4': (47.395,-0.696,30.164)
C8: (46.449,1.865,29.269)
O2': (50.521,-0.683,30.000)
C6: (47.855,4.649,27.619)
C5: (47.447,3.457,28.267)
C4: (48.382,2.454,28.412)
P: (44.671,-2.531,32.885)
C4': (47.941,-1.049,31.411)
C2': (49.561,0.313,30.315)
C2: (49.996,3.613,27.411)
N1: (49.168,4.672,27.209)
N3: (49.678,2.468,28.009)
N6: (47.056,5.691,27.411)
N7: (46.228,3.074,28.809)
N9: (47.733,1.429,29.067)
O5': (45.781,-1.925,31.915)
O3': (49.926,-0.416,32.665)
OP2: (43.687,-1.568,33.446)
C3': (48.980,0.040,31.695)
C1': (48.324,0.137,29.433)
C5': (46.869,-1.149,32.482)
O4': (47.395,-0.696,30.164)
C8: (46.449,1.865,29.269)
O2': (50.521,-0.683,30.000)
C6: (47.855,4.649,27.619)
C5: (47.447,3.457,28.267)
C4: (48.382,2.454,28.412)
P: (44.671,-2.531,32.885)
C4': (47.941,-1.049,31.411)
C2': (49.561,0.313,30.315)
C2: (49.996,3.613,27.411)
N1: (49.168,4.672,27.209)
N3: (49.678,2.468,28.009)
N6: (47.056,5.691,27.411)
N7: (46.228,3.074,28.809)
N9: (47.733,1.429,29.067)
O5': (45.781,-1.925,31.915)
O3': (49.926,-0.416,32.665)
Image (generated by PyMOL):