Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2347:A2348
Extra
PDB:
ATOM 1 O3' G A2346 -128.433 -73.820 44.043 1.00 0.01 O
ATOM 2 P C A2347 -127.026 -74.022 43.295 1.00 0.01 P
ATOM 3 OP1 C A2347 -127.084 -75.348 42.624 1.00 0.01 O
ATOM 4 OP2 C A2347 -125.962 -73.755 44.283 1.00 0.01 O
ATOM 5 O5' C A2347 -127.032 -72.864 42.217 1.00 0.01 O
ATOM 6 C5' C A2347 -127.538 -73.101 40.929 1.00 0.01 C
ATOM 7 C4' C A2347 -127.816 -71.828 40.198 1.00 0.01 C
ATOM 8 O4' C A2347 -128.157 -70.782 41.112 1.00 0.01 O
ATOM 9 C3' C A2347 -126.675 -71.236 39.431 1.00 0.01 C
ATOM 10 O3' C A2347 -126.405 -71.943 38.258 1.00 0.01 O
ATOM 11 C2' C A2347 -127.207 -69.856 39.174 1.00 0.01 C
ATOM 12 O2' C A2347 -128.239 -69.908 38.196 1.00 0.01 O
ATOM 13 C1' C A2347 -127.838 -69.551 40.520 1.00 0.01 C
ATOM 14 N1 C A2347 -126.915 -68.841 41.394 1.00 0.01 N
ATOM 15 C2 C A2347 -126.614 -67.550 40.997 1.00 0.01 C
ATOM 16 O2 C A2347 -127.148 -67.167 39.965 1.00 0.01 O
ATOM 17 N3 C A2347 -125.780 -66.769 41.684 1.00 0.01 N
ATOM 18 C4 C A2347 -125.249 -67.282 42.769 1.00 0.01 C
ATOM 19 N4 C A2347 -124.419 -66.489 43.440 1.00 0.01 N
ATOM 20 C5 C A2347 -125.531 -68.612 43.219 1.00 0.01 C
ATOM 21 C6 C A2347 -126.366 -69.373 42.509 1.00 0.01 C
ATOM 22 P G A2348 -124.968 -71.882 37.618 1.00 0.01 P
ATOM 23 OP1 G A2348 -124.949 -72.920 36.565 1.00 0.01 O
ATOM 24 OP2 G A2348 -124.002 -71.952 38.714 1.00 0.01 O
ATOM 25 O5' G A2348 -124.934 -70.440 36.966 1.00 0.01 O
TER
ATOM 1 O3' C B2347 -126.405 -71.943 38.258 1.00 0.01 O
ATOM 2 P G B2348 -124.968 -71.882 37.618 1.00 0.01 P
ATOM 3 OP1 G B2348 -124.949 -72.920 36.565 1.00 0.01 O
ATOM 4 OP2 G B2348 -124.002 -71.952 38.714 1.00 0.01 O
ATOM 5 O5' G B2348 -124.934 -70.440 36.966 1.00 0.01 O
ATOM 6 C5' G B2348 -125.535 -70.221 35.703 1.00 0.01 C
ATOM 7 C4' G B2348 -125.551 -68.767 35.324 1.00 0.01 C
ATOM 8 O4' G B2348 -125.794 -67.948 36.484 1.00 0.01 O
ATOM 9 C3' G B2348 -124.267 -68.213 34.766 1.00 0.01 C
ATOM 10 O3' G B2348 -124.069 -68.560 33.426 1.00 0.01 O
ATOM 11 C2' G B2348 -124.445 -66.724 34.993 1.00 0.01 C
ATOM 12 O2' G B2348 -125.367 -66.169 34.071 1.00 0.01 O
ATOM 13 C1' G B2348 -125.091 -66.736 36.358 1.00 0.01 C
ATOM 14 N9 G B2348 -124.098 -66.688 37.420 1.00 0.01 N
ATOM 15 C8 G B2348 -123.869 -67.702 38.280 1.00 0.01 C
ATOM 16 N7 G B2348 -122.954 -67.386 39.136 1.00 0.01 N
ATOM 17 C5 G B2348 -122.568 -66.105 38.826 1.00 0.01 C
ATOM 18 C6 G B2348 -121.617 -65.282 39.453 1.00 0.01 C
ATOM 19 O6 G B2348 -120.904 -65.536 40.416 1.00 0.01 O
ATOM 20 N1 G B2348 -121.555 -64.057 38.840 1.00 0.01 N
ATOM 21 C2 G B2348 -122.301 -63.693 37.767 1.00 0.01 C
ATOM 22 N2 G B2348 -122.066 -62.480 37.330 1.00 0.01 N
ATOM 23 N3 G B2348 -123.207 -64.430 37.163 1.00 0.01 N
ATOM 24 C4 G B2348 -123.283 -65.643 37.756 1.00 0.01 C
ATOM 25 P U B2349 -122.910 -69.575 33.025 1.00 0.01 P
ATOM 26 OP1 U B2349 -123.251 -70.094 31.697 1.00 0.01 O
ATOM 27 OP2 U B2349 -122.735 -70.521 34.126 1.00 0.01 O
ATOM 28 O5' U B2349 -121.666 -68.632 32.925 1.00 0.01 O
TER
ATOM 2 P C A2347 -127.026 -74.022 43.295 1.00 0.01 P
ATOM 3 OP1 C A2347 -127.084 -75.348 42.624 1.00 0.01 O
ATOM 4 OP2 C A2347 -125.962 -73.755 44.283 1.00 0.01 O
ATOM 5 O5' C A2347 -127.032 -72.864 42.217 1.00 0.01 O
ATOM 6 C5' C A2347 -127.538 -73.101 40.929 1.00 0.01 C
ATOM 7 C4' C A2347 -127.816 -71.828 40.198 1.00 0.01 C
ATOM 8 O4' C A2347 -128.157 -70.782 41.112 1.00 0.01 O
ATOM 9 C3' C A2347 -126.675 -71.236 39.431 1.00 0.01 C
ATOM 10 O3' C A2347 -126.405 -71.943 38.258 1.00 0.01 O
ATOM 11 C2' C A2347 -127.207 -69.856 39.174 1.00 0.01 C
ATOM 12 O2' C A2347 -128.239 -69.908 38.196 1.00 0.01 O
ATOM 13 C1' C A2347 -127.838 -69.551 40.520 1.00 0.01 C
ATOM 14 N1 C A2347 -126.915 -68.841 41.394 1.00 0.01 N
ATOM 15 C2 C A2347 -126.614 -67.550 40.997 1.00 0.01 C
ATOM 16 O2 C A2347 -127.148 -67.167 39.965 1.00 0.01 O
ATOM 17 N3 C A2347 -125.780 -66.769 41.684 1.00 0.01 N
ATOM 18 C4 C A2347 -125.249 -67.282 42.769 1.00 0.01 C
ATOM 19 N4 C A2347 -124.419 -66.489 43.440 1.00 0.01 N
ATOM 20 C5 C A2347 -125.531 -68.612 43.219 1.00 0.01 C
ATOM 21 C6 C A2347 -126.366 -69.373 42.509 1.00 0.01 C
ATOM 22 P G A2348 -124.968 -71.882 37.618 1.00 0.01 P
ATOM 23 OP1 G A2348 -124.949 -72.920 36.565 1.00 0.01 O
ATOM 24 OP2 G A2348 -124.002 -71.952 38.714 1.00 0.01 O
ATOM 25 O5' G A2348 -124.934 -70.440 36.966 1.00 0.01 O
TER
ATOM 1 O3' C B2347 -126.405 -71.943 38.258 1.00 0.01 O
ATOM 2 P G B2348 -124.968 -71.882 37.618 1.00 0.01 P
ATOM 3 OP1 G B2348 -124.949 -72.920 36.565 1.00 0.01 O
ATOM 4 OP2 G B2348 -124.002 -71.952 38.714 1.00 0.01 O
ATOM 5 O5' G B2348 -124.934 -70.440 36.966 1.00 0.01 O
ATOM 6 C5' G B2348 -125.535 -70.221 35.703 1.00 0.01 C
ATOM 7 C4' G B2348 -125.551 -68.767 35.324 1.00 0.01 C
ATOM 8 O4' G B2348 -125.794 -67.948 36.484 1.00 0.01 O
ATOM 9 C3' G B2348 -124.267 -68.213 34.766 1.00 0.01 C
ATOM 10 O3' G B2348 -124.069 -68.560 33.426 1.00 0.01 O
ATOM 11 C2' G B2348 -124.445 -66.724 34.993 1.00 0.01 C
ATOM 12 O2' G B2348 -125.367 -66.169 34.071 1.00 0.01 O
ATOM 13 C1' G B2348 -125.091 -66.736 36.358 1.00 0.01 C
ATOM 14 N9 G B2348 -124.098 -66.688 37.420 1.00 0.01 N
ATOM 15 C8 G B2348 -123.869 -67.702 38.280 1.00 0.01 C
ATOM 16 N7 G B2348 -122.954 -67.386 39.136 1.00 0.01 N
ATOM 17 C5 G B2348 -122.568 -66.105 38.826 1.00 0.01 C
ATOM 18 C6 G B2348 -121.617 -65.282 39.453 1.00 0.01 C
ATOM 19 O6 G B2348 -120.904 -65.536 40.416 1.00 0.01 O
ATOM 20 N1 G B2348 -121.555 -64.057 38.840 1.00 0.01 N
ATOM 21 C2 G B2348 -122.301 -63.693 37.767 1.00 0.01 C
ATOM 22 N2 G B2348 -122.066 -62.480 37.330 1.00 0.01 N
ATOM 23 N3 G B2348 -123.207 -64.430 37.163 1.00 0.01 N
ATOM 24 C4 G B2348 -123.283 -65.643 37.756 1.00 0.01 C
ATOM 25 P U B2349 -122.910 -69.575 33.025 1.00 0.01 P
ATOM 26 OP1 U B2349 -123.251 -70.094 31.697 1.00 0.01 O
ATOM 27 OP2 U B2349 -122.735 -70.521 34.126 1.00 0.01 O
ATOM 28 O5' U B2349 -121.666 -68.632 32.925 1.00 0.01 O
TER
Atoms:
C2: (-126.614,-67.550,40.997)
OP1: (-127.084,-75.348,42.624)
OP2: (-125.962,-73.755,44.283)
C4: (-125.249,-67.282,42.769)
O5': (-127.032,-72.864,42.217)
C3': (-126.675,-71.236,39.431)
C1': (-127.838,-69.551,40.520)
O4': (-128.157,-70.782,41.112)
C5': (-127.538,-73.101,40.929)
P: (-127.026,-74.022,43.295)
O2: (-127.148,-67.167,39.965)
C4': (-127.816,-71.828,40.198)
C2': (-127.207,-69.856,39.174)
O2': (-128.239,-69.908,38.196)
N1: (-126.915,-68.841,41.394)
N3: (-125.780,-66.769,41.684)
N4: (-124.419,-66.489,43.440)
C6: (-126.366,-69.373,42.509)
C5: (-125.531,-68.612,43.219)
O3': (-126.405,-71.943,38.258)
OP1: (-127.084,-75.348,42.624)
OP2: (-125.962,-73.755,44.283)
C4: (-125.249,-67.282,42.769)
O5': (-127.032,-72.864,42.217)
C3': (-126.675,-71.236,39.431)
C1': (-127.838,-69.551,40.520)
O4': (-128.157,-70.782,41.112)
C5': (-127.538,-73.101,40.929)
P: (-127.026,-74.022,43.295)
O2: (-127.148,-67.167,39.965)
C4': (-127.816,-71.828,40.198)
C2': (-127.207,-69.856,39.174)
O2': (-128.239,-69.908,38.196)
N1: (-126.915,-68.841,41.394)
N3: (-125.780,-66.769,41.684)
N4: (-124.419,-66.489,43.440)
C6: (-126.366,-69.373,42.509)
C5: (-125.531,-68.612,43.219)
O3': (-126.405,-71.943,38.258)
OP1: (-124.949,-72.920,36.565)
OP2: (-124.002,-71.952,38.714)
C3': (-124.267,-68.213,34.766)
C1': (-125.091,-66.736,36.358)
C5': (-125.535,-70.221,35.703)
O6: (-120.904,-65.536,40.416)
O4': (-125.794,-67.948,36.484)
C8: (-123.869,-67.702,38.280)
C2: (-122.301,-63.693,37.767)
C6: (-121.617,-65.282,39.453)
C5: (-122.568,-66.105,38.826)
C4: (-123.283,-65.643,37.756)
P: (-124.968,-71.882,37.618)
C4': (-125.551,-68.767,35.324)
C2': (-124.445,-66.724,34.993)
O2': (-125.367,-66.169,34.071)
N1: (-121.555,-64.057,38.840)
N2: (-122.066,-62.480,37.330)
N3: (-123.207,-64.430,37.163)
N7: (-122.954,-67.386,39.136)
N9: (-124.098,-66.688,37.420)
O5': (-124.934,-70.440,36.966)
O3': (-124.069,-68.560,33.426)
OP2: (-124.002,-71.952,38.714)
C3': (-124.267,-68.213,34.766)
C1': (-125.091,-66.736,36.358)
C5': (-125.535,-70.221,35.703)
O6: (-120.904,-65.536,40.416)
O4': (-125.794,-67.948,36.484)
C8: (-123.869,-67.702,38.280)
C2: (-122.301,-63.693,37.767)
C6: (-121.617,-65.282,39.453)
C5: (-122.568,-66.105,38.826)
C4: (-123.283,-65.643,37.756)
P: (-124.968,-71.882,37.618)
C4': (-125.551,-68.767,35.324)
C2': (-124.445,-66.724,34.993)
O2': (-125.367,-66.169,34.071)
N1: (-121.555,-64.057,38.840)
N2: (-122.066,-62.480,37.330)
N3: (-123.207,-64.430,37.163)
N7: (-122.954,-67.386,39.136)
N9: (-124.098,-66.688,37.420)
O5': (-124.934,-70.440,36.966)
O3': (-124.069,-68.560,33.426)
Image (generated by PyMOL):