Doublet info:
Details
Nucleotide types:
Ca
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
409D:A2:A3
Extra
PDB:
ATOM 1 O3' C A 1 3.983 20.296 11.306 1.00 43.56 O
ATOM 2 P C A 2 2.923 21.182 12.150 1.00 43.68 P
ATOM 3 OP1 C A 2 2.628 20.490 13.414 1.00 48.00 O
ATOM 4 OP2 C A 2 1.786 21.581 11.255 1.00 46.72 O
ATOM 5 O5' C A 2 3.768 22.482 12.489 1.00 42.15 O
ATOM 6 C5' C A 2 5.006 22.371 13.200 1.00 42.24 C
ATOM 7 C4' C A 2 5.730 23.700 13.209 1.00 40.24 C
ATOM 8 O4' C A 2 6.054 24.092 11.837 1.00 39.79 O
ATOM 9 C3' C A 2 4.926 24.894 13.692 1.00 40.78 C
ATOM 10 O3' C A 2 4.857 25.003 15.098 1.00 42.63 O
ATOM 11 C2' C A 2 5.710 26.058 13.131 1.00 40.87 C
ATOM 12 O2' C A 2 6.870 26.320 13.875 1.00 43.64 O
ATOM 13 C1' C A 2 6.073 25.557 11.761 1.00 38.98 C
ATOM 14 N1 C A 2 5.092 26.052 10.773 1.00 30.04 N
ATOM 15 C2 C A 2 5.123 27.391 10.284 1.00 30.89 C
ATOM 16 O2 C A 2 5.878 28.230 10.805 1.00 40.18 O
ATOM 17 N3 C A 2 4.294 27.697 9.244 1.00 30.87 N
ATOM 18 C4 C A 2 3.466 26.764 8.758 1.00 25.33 C
ATOM 19 N4 C A 2 2.638 27.096 7.770 1.00 30.68 N
ATOM 20 C5 C A 2 3.415 25.478 9.292 1.00 26.50 C
ATOM 21 C6 C A 2 4.210 25.195 10.296 1.00 26.17 C
ATOM 22 P a A 3 3.535 25.613 15.762 1.00 44.30 P
ATOM 23 OP1 a A 3 3.481 25.197 17.189 1.00 45.28 O
ATOM 24 OP2 a A 3 2.376 25.312 14.848 1.00 43.80 O
ATOM 25 O5' a A 3 3.800 27.175 15.683 1.00 45.20 O
TER
ATOM 1 O3' C B 2 4.857 25.003 15.098 1.00 42.63 O
ATOM 2 P a B 3 3.535 25.613 15.762 1.00 44.30 P
ATOM 3 OP1 a B 3 3.481 25.197 17.189 1.00 45.28 O
ATOM 4 OP2 a B 3 2.376 25.312 14.848 1.00 43.80 O
ATOM 5 O5' a B 3 3.800 27.175 15.683 1.00 45.20 O
ATOM 6 C5' a B 3 5.048 27.708 16.106 1.00 40.05 C
ATOM 7 C4' a B 3 5.216 29.107 15.589 1.00 37.87 C
ATOM 8 O4' a B 3 5.285 29.108 14.140 1.00 37.83 O
ATOM 9 C3' a B 3 4.080 30.076 15.826 1.00 37.15 C
ATOM 10 O3' a B 3 4.080 30.545 17.153 1.00 39.34 O
ATOM 11 C2' a B 3 4.469 31.191 14.874 1.00 36.62 C
ATOM 12 O2' a B 3 5.588 31.901 15.340 1.00 41.89 O
ATOM 13 C1' a B 3 4.896 30.386 13.666 1.00 32.42 C
ATOM 14 N9 a B 3 3.794 30.240 12.738 1.00 25.17 N
ATOM 15 C8 a B 3 3.137 29.101 12.367 1.00 18.48 C
ATOM 16 N7 a B 3 2.269 29.308 11.411 1.00 25.64 N
ATOM 17 C5 a B 3 2.327 30.678 11.185 1.00 27.67 C
ATOM 18 C6 a B 3 1.610 31.503 10.273 1.00 31.05 C
ATOM 19 O6 a B 3 0.755 31.178 9.458 1.00 40.38 O
ATOM 20 N1 a B 3 1.977 32.841 10.379 1.00 34.81 N
ATOM 21 C2 a B 3 2.918 33.330 11.257 1.00 37.76 C
ATOM 22 N3 a B 3 3.593 32.570 12.112 1.00 33.90 N
ATOM 23 C4 a B 3 3.245 31.269 12.023 1.00 29.15 C
ATOM 24 P U B 4 2.699 30.650 17.932 1.00 35.76 P
ATOM 25 OP1 U B 4 3.021 30.773 19.350 1.00 33.65 O
ATOM 26 OP2 U B 4 1.848 29.534 17.462 1.00 35.86 O
ATOM 27 O5' U B 4 2.023 31.979 17.356 1.00 41.58 O
TER
ATOM 2 P C A 2 2.923 21.182 12.150 1.00 43.68 P
ATOM 3 OP1 C A 2 2.628 20.490 13.414 1.00 48.00 O
ATOM 4 OP2 C A 2 1.786 21.581 11.255 1.00 46.72 O
ATOM 5 O5' C A 2 3.768 22.482 12.489 1.00 42.15 O
ATOM 6 C5' C A 2 5.006 22.371 13.200 1.00 42.24 C
ATOM 7 C4' C A 2 5.730 23.700 13.209 1.00 40.24 C
ATOM 8 O4' C A 2 6.054 24.092 11.837 1.00 39.79 O
ATOM 9 C3' C A 2 4.926 24.894 13.692 1.00 40.78 C
ATOM 10 O3' C A 2 4.857 25.003 15.098 1.00 42.63 O
ATOM 11 C2' C A 2 5.710 26.058 13.131 1.00 40.87 C
ATOM 12 O2' C A 2 6.870 26.320 13.875 1.00 43.64 O
ATOM 13 C1' C A 2 6.073 25.557 11.761 1.00 38.98 C
ATOM 14 N1 C A 2 5.092 26.052 10.773 1.00 30.04 N
ATOM 15 C2 C A 2 5.123 27.391 10.284 1.00 30.89 C
ATOM 16 O2 C A 2 5.878 28.230 10.805 1.00 40.18 O
ATOM 17 N3 C A 2 4.294 27.697 9.244 1.00 30.87 N
ATOM 18 C4 C A 2 3.466 26.764 8.758 1.00 25.33 C
ATOM 19 N4 C A 2 2.638 27.096 7.770 1.00 30.68 N
ATOM 20 C5 C A 2 3.415 25.478 9.292 1.00 26.50 C
ATOM 21 C6 C A 2 4.210 25.195 10.296 1.00 26.17 C
ATOM 22 P a A 3 3.535 25.613 15.762 1.00 44.30 P
ATOM 23 OP1 a A 3 3.481 25.197 17.189 1.00 45.28 O
ATOM 24 OP2 a A 3 2.376 25.312 14.848 1.00 43.80 O
ATOM 25 O5' a A 3 3.800 27.175 15.683 1.00 45.20 O
TER
ATOM 1 O3' C B 2 4.857 25.003 15.098 1.00 42.63 O
ATOM 2 P a B 3 3.535 25.613 15.762 1.00 44.30 P
ATOM 3 OP1 a B 3 3.481 25.197 17.189 1.00 45.28 O
ATOM 4 OP2 a B 3 2.376 25.312 14.848 1.00 43.80 O
ATOM 5 O5' a B 3 3.800 27.175 15.683 1.00 45.20 O
ATOM 6 C5' a B 3 5.048 27.708 16.106 1.00 40.05 C
ATOM 7 C4' a B 3 5.216 29.107 15.589 1.00 37.87 C
ATOM 8 O4' a B 3 5.285 29.108 14.140 1.00 37.83 O
ATOM 9 C3' a B 3 4.080 30.076 15.826 1.00 37.15 C
ATOM 10 O3' a B 3 4.080 30.545 17.153 1.00 39.34 O
ATOM 11 C2' a B 3 4.469 31.191 14.874 1.00 36.62 C
ATOM 12 O2' a B 3 5.588 31.901 15.340 1.00 41.89 O
ATOM 13 C1' a B 3 4.896 30.386 13.666 1.00 32.42 C
ATOM 14 N9 a B 3 3.794 30.240 12.738 1.00 25.17 N
ATOM 15 C8 a B 3 3.137 29.101 12.367 1.00 18.48 C
ATOM 16 N7 a B 3 2.269 29.308 11.411 1.00 25.64 N
ATOM 17 C5 a B 3 2.327 30.678 11.185 1.00 27.67 C
ATOM 18 C6 a B 3 1.610 31.503 10.273 1.00 31.05 C
ATOM 19 O6 a B 3 0.755 31.178 9.458 1.00 40.38 O
ATOM 20 N1 a B 3 1.977 32.841 10.379 1.00 34.81 N
ATOM 21 C2 a B 3 2.918 33.330 11.257 1.00 37.76 C
ATOM 22 N3 a B 3 3.593 32.570 12.112 1.00 33.90 N
ATOM 23 C4 a B 3 3.245 31.269 12.023 1.00 29.15 C
ATOM 24 P U B 4 2.699 30.650 17.932 1.00 35.76 P
ATOM 25 OP1 U B 4 3.021 30.773 19.350 1.00 33.65 O
ATOM 26 OP2 U B 4 1.848 29.534 17.462 1.00 35.86 O
ATOM 27 O5' U B 4 2.023 31.979 17.356 1.00 41.58 O
TER
Atoms:
C2: (5.123,27.391,10.284)
OP1: (2.628,20.490,13.414)
OP2: (1.786,21.581,11.255)
C4: (3.466,26.764,8.758)
O5': (3.768,22.482,12.489)
C3': (4.926,24.894,13.692)
C1': (6.073,25.557,11.761)
O4': (6.054,24.092,11.837)
C5': (5.006,22.371,13.200)
P: (2.923,21.182,12.150)
O2: (5.878,28.230,10.805)
C4': (5.730,23.700,13.209)
C2': (5.710,26.058,13.131)
O2': (6.870,26.320,13.875)
N1: (5.092,26.052,10.773)
N3: (4.294,27.697,9.244)
N4: (2.638,27.096,7.770)
C6: (4.210,25.195,10.296)
C5: (3.415,25.478,9.292)
O3': (4.857,25.003,15.098)
OP1: (2.628,20.490,13.414)
OP2: (1.786,21.581,11.255)
C4: (3.466,26.764,8.758)
O5': (3.768,22.482,12.489)
C3': (4.926,24.894,13.692)
C1': (6.073,25.557,11.761)
O4': (6.054,24.092,11.837)
C5': (5.006,22.371,13.200)
P: (2.923,21.182,12.150)
O2: (5.878,28.230,10.805)
C4': (5.730,23.700,13.209)
C2': (5.710,26.058,13.131)
O2': (6.870,26.320,13.875)
N1: (5.092,26.052,10.773)
N3: (4.294,27.697,9.244)
N4: (2.638,27.096,7.770)
C6: (4.210,25.195,10.296)
C5: (3.415,25.478,9.292)
O3': (4.857,25.003,15.098)
OP1: (3.481,25.197,17.189)
OP2: (2.376,25.312,14.848)
C3': (4.080,30.076,15.826)
C1': (4.896,30.386,13.666)
C5': (5.048,27.708,16.106)
O6: (0.755,31.178,9.458)
O4': (5.285,29.108,14.140)
C8: (3.137,29.101,12.367)
C2: (2.918,33.330,11.257)
C6: (1.610,31.503,10.273)
C5: (2.327,30.678,11.185)
C4: (3.245,31.269,12.023)
P: (3.535,25.613,15.762)
C4': (5.216,29.107,15.589)
C2': (4.469,31.191,14.874)
O2': (5.588,31.901,15.340)
N1: (1.977,32.841,10.379)
N3: (3.593,32.570,12.112)
N7: (2.269,29.308,11.411)
N9: (3.794,30.240,12.738)
O5': (3.800,27.175,15.683)
O3': (4.080,30.545,17.153)
OP2: (2.376,25.312,14.848)
C3': (4.080,30.076,15.826)
C1': (4.896,30.386,13.666)
C5': (5.048,27.708,16.106)
O6: (0.755,31.178,9.458)
O4': (5.285,29.108,14.140)
C8: (3.137,29.101,12.367)
C2: (2.918,33.330,11.257)
C6: (1.610,31.503,10.273)
C5: (2.327,30.678,11.185)
C4: (3.245,31.269,12.023)
P: (3.535,25.613,15.762)
C4': (5.216,29.107,15.589)
C2': (4.469,31.191,14.874)
O2': (5.588,31.901,15.340)
N1: (1.977,32.841,10.379)
N3: (3.593,32.570,12.112)
N7: (2.269,29.308,11.411)
N9: (3.794,30.240,12.738)
O5': (3.800,27.175,15.683)
O3': (4.080,30.545,17.153)
Image (generated by PyMOL):