Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1235:A1231
Extra
PDB:
ATOM 1 O3' G A1234 29.899 -88.836 0.161 1.00 55.75 O
ATOM 2 P A A1235 29.233 -88.005 1.381 1.00 56.67 P
ATOM 3 OP1 A A1235 30.126 -88.167 2.574 1.00 40.16 O
ATOM 4 OP2 A A1235 27.807 -88.420 1.495 1.00 50.64 O
ATOM 5 O5' A A1235 29.310 -86.533 0.860 1.00 62.15 O
ATOM 6 C5' A A1235 30.552 -85.943 0.572 1.00 62.14 C
ATOM 7 C4' A A1235 30.476 -84.456 0.701 1.00 58.24 C
ATOM 8 O4' A A1235 29.582 -83.943 -0.314 1.00 58.94 O
ATOM 9 C3' A A1235 29.938 -83.944 2.043 1.00 50.16 C
ATOM 10 O3' A A1235 30.711 -82.846 2.477 1.00 57.00 O
ATOM 11 C2' A A1235 28.557 -83.432 1.702 1.00 43.56 C
ATOM 12 O2' A A1235 28.148 -82.362 2.505 1.00 60.00 O
ATOM 13 C1' A A1235 28.746 -82.983 0.274 1.00 50.04 C
ATOM 14 N9 A A1235 27.505 -82.885 -0.491 1.00 39.34 N
ATOM 15 C8 A A1235 26.289 -83.438 -0.239 1.00 40.89 C
ATOM 16 N7 A A1235 25.386 -83.084 -1.110 1.00 43.65 N
ATOM 17 C5 A A1235 26.032 -82.227 -1.976 1.00 38.29 C
ATOM 18 C6 A A1235 25.630 -81.520 -3.125 1.00 34.51 C
ATOM 19 N6 A A1235 24.423 -81.509 -3.672 1.00 33.49 N
ATOM 20 N1 A A1235 26.549 -80.777 -3.738 1.00 38.90 N
ATOM 21 C2 A A1235 27.783 -80.742 -3.231 1.00 36.77 C
ATOM 22 N3 A A1235 28.286 -81.352 -2.169 1.00 38.53 N
ATOM 23 C4 A A1235 27.339 -82.096 -1.588 1.00 38.60 C
ATOM 24 P A A1236 32.060 -83.070 3.308 1.00 47.90 P
ATOM 25 OP1 A A1236 33.193 -82.960 2.323 1.00 39.30 O
ATOM 26 OP2 A A1236 31.908 -84.330 4.100 1.00 40.68 O
ATOM 27 O5' A A1236 32.043 -81.818 4.279 1.00 32.66 O
TER
ATOM 1 O3' G B1230 15.344 -84.462 0.612 1.00 43.45 O
ATOM 2 P U B1231 15.915 -85.831 -0.006 1.00 53.87 P
ATOM 3 OP1 U B1231 14.771 -86.552 -0.622 1.00 58.30 O
ATOM 4 OP2 U B1231 16.691 -86.501 1.065 1.00 40.19 O
ATOM 5 O5' U B1231 16.874 -85.334 -1.147 1.00 73.74 O
ATOM 6 C5' U B1231 16.347 -84.680 -2.279 1.00 76.98 C
ATOM 7 C4' U B1231 17.437 -84.227 -3.198 1.00 71.68 C
ATOM 8 O4' U B1231 18.321 -83.330 -2.496 1.00 70.50 O
ATOM 9 C3' U B1231 18.347 -85.313 -3.705 1.00 69.03 C
ATOM 10 O3' U B1231 17.803 -85.992 -4.802 1.00 66.13 O
ATOM 11 C2' U B1231 19.617 -84.561 -4.038 1.00 70.56 C
ATOM 12 O2' U B1231 19.497 -83.929 -5.289 1.00 79.45 O
ATOM 13 C1' U B1231 19.632 -83.488 -2.961 1.00 68.39 C
ATOM 14 N1 U B1231 20.475 -83.865 -1.837 1.00 61.02 N
ATOM 15 C2 U B1231 21.777 -83.529 -1.954 1.00 54.45 C
ATOM 16 O2 U B1231 22.163 -82.950 -2.930 1.00 56.28 O
ATOM 17 N3 U B1231 22.569 -83.884 -0.910 1.00 49.63 N
ATOM 18 C4 U B1231 22.172 -84.545 0.220 1.00 46.14 C
ATOM 19 O4 U B1231 22.987 -84.812 1.087 1.00 49.41 O
ATOM 20 C5 U B1231 20.793 -84.862 0.273 1.00 57.84 C
ATOM 21 C6 U B1231 20.003 -84.522 -0.742 1.00 63.21 C
ATOM 22 P G B1232 17.671 -87.575 -4.766 1.00 45.51 P
ATOM 23 OP1 G B1232 16.738 -87.958 -5.857 1.00 66.69 O
ATOM 24 OP2 G B1232 17.345 -87.968 -3.356 1.00 63.35 O
ATOM 25 O5' G B1232 19.130 -88.052 -5.122 1.00 53.02 O
TER
ATOM 2 P A A1235 29.233 -88.005 1.381 1.00 56.67 P
ATOM 3 OP1 A A1235 30.126 -88.167 2.574 1.00 40.16 O
ATOM 4 OP2 A A1235 27.807 -88.420 1.495 1.00 50.64 O
ATOM 5 O5' A A1235 29.310 -86.533 0.860 1.00 62.15 O
ATOM 6 C5' A A1235 30.552 -85.943 0.572 1.00 62.14 C
ATOM 7 C4' A A1235 30.476 -84.456 0.701 1.00 58.24 C
ATOM 8 O4' A A1235 29.582 -83.943 -0.314 1.00 58.94 O
ATOM 9 C3' A A1235 29.938 -83.944 2.043 1.00 50.16 C
ATOM 10 O3' A A1235 30.711 -82.846 2.477 1.00 57.00 O
ATOM 11 C2' A A1235 28.557 -83.432 1.702 1.00 43.56 C
ATOM 12 O2' A A1235 28.148 -82.362 2.505 1.00 60.00 O
ATOM 13 C1' A A1235 28.746 -82.983 0.274 1.00 50.04 C
ATOM 14 N9 A A1235 27.505 -82.885 -0.491 1.00 39.34 N
ATOM 15 C8 A A1235 26.289 -83.438 -0.239 1.00 40.89 C
ATOM 16 N7 A A1235 25.386 -83.084 -1.110 1.00 43.65 N
ATOM 17 C5 A A1235 26.032 -82.227 -1.976 1.00 38.29 C
ATOM 18 C6 A A1235 25.630 -81.520 -3.125 1.00 34.51 C
ATOM 19 N6 A A1235 24.423 -81.509 -3.672 1.00 33.49 N
ATOM 20 N1 A A1235 26.549 -80.777 -3.738 1.00 38.90 N
ATOM 21 C2 A A1235 27.783 -80.742 -3.231 1.00 36.77 C
ATOM 22 N3 A A1235 28.286 -81.352 -2.169 1.00 38.53 N
ATOM 23 C4 A A1235 27.339 -82.096 -1.588 1.00 38.60 C
ATOM 24 P A A1236 32.060 -83.070 3.308 1.00 47.90 P
ATOM 25 OP1 A A1236 33.193 -82.960 2.323 1.00 39.30 O
ATOM 26 OP2 A A1236 31.908 -84.330 4.100 1.00 40.68 O
ATOM 27 O5' A A1236 32.043 -81.818 4.279 1.00 32.66 O
TER
ATOM 1 O3' G B1230 15.344 -84.462 0.612 1.00 43.45 O
ATOM 2 P U B1231 15.915 -85.831 -0.006 1.00 53.87 P
ATOM 3 OP1 U B1231 14.771 -86.552 -0.622 1.00 58.30 O
ATOM 4 OP2 U B1231 16.691 -86.501 1.065 1.00 40.19 O
ATOM 5 O5' U B1231 16.874 -85.334 -1.147 1.00 73.74 O
ATOM 6 C5' U B1231 16.347 -84.680 -2.279 1.00 76.98 C
ATOM 7 C4' U B1231 17.437 -84.227 -3.198 1.00 71.68 C
ATOM 8 O4' U B1231 18.321 -83.330 -2.496 1.00 70.50 O
ATOM 9 C3' U B1231 18.347 -85.313 -3.705 1.00 69.03 C
ATOM 10 O3' U B1231 17.803 -85.992 -4.802 1.00 66.13 O
ATOM 11 C2' U B1231 19.617 -84.561 -4.038 1.00 70.56 C
ATOM 12 O2' U B1231 19.497 -83.929 -5.289 1.00 79.45 O
ATOM 13 C1' U B1231 19.632 -83.488 -2.961 1.00 68.39 C
ATOM 14 N1 U B1231 20.475 -83.865 -1.837 1.00 61.02 N
ATOM 15 C2 U B1231 21.777 -83.529 -1.954 1.00 54.45 C
ATOM 16 O2 U B1231 22.163 -82.950 -2.930 1.00 56.28 O
ATOM 17 N3 U B1231 22.569 -83.884 -0.910 1.00 49.63 N
ATOM 18 C4 U B1231 22.172 -84.545 0.220 1.00 46.14 C
ATOM 19 O4 U B1231 22.987 -84.812 1.087 1.00 49.41 O
ATOM 20 C5 U B1231 20.793 -84.862 0.273 1.00 57.84 C
ATOM 21 C6 U B1231 20.003 -84.522 -0.742 1.00 63.21 C
ATOM 22 P G B1232 17.671 -87.575 -4.766 1.00 45.51 P
ATOM 23 OP1 G B1232 16.738 -87.958 -5.857 1.00 66.69 O
ATOM 24 OP2 G B1232 17.345 -87.968 -3.356 1.00 63.35 O
ATOM 25 O5' G B1232 19.130 -88.052 -5.122 1.00 53.02 O
TER
Atoms:
OP1: (30.126,-88.167,2.574)
OP2: (27.807,-88.420,1.495)
C3': (29.938,-83.944,2.043)
C1': (28.746,-82.983,0.274)
C5': (30.552,-85.943,0.572)
O4': (29.582,-83.943,-0.314)
C8: (26.289,-83.438,-0.239)
O2': (28.148,-82.362,2.505)
C6: (25.630,-81.520,-3.125)
C5: (26.032,-82.227,-1.976)
C4: (27.339,-82.096,-1.588)
P: (29.233,-88.005,1.381)
C4': (30.476,-84.456,0.701)
C2': (28.557,-83.432,1.702)
C2: (27.783,-80.742,-3.231)
N1: (26.549,-80.777,-3.738)
N3: (28.286,-81.352,-2.169)
N6: (24.423,-81.509,-3.672)
N7: (25.386,-83.084,-1.110)
N9: (27.505,-82.885,-0.491)
O5': (29.310,-86.533,0.860)
O3': (30.711,-82.846,2.477)
OP2: (27.807,-88.420,1.495)
C3': (29.938,-83.944,2.043)
C1': (28.746,-82.983,0.274)
C5': (30.552,-85.943,0.572)
O4': (29.582,-83.943,-0.314)
C8: (26.289,-83.438,-0.239)
O2': (28.148,-82.362,2.505)
C6: (25.630,-81.520,-3.125)
C5: (26.032,-82.227,-1.976)
C4: (27.339,-82.096,-1.588)
P: (29.233,-88.005,1.381)
C4': (30.476,-84.456,0.701)
C2': (28.557,-83.432,1.702)
C2: (27.783,-80.742,-3.231)
N1: (26.549,-80.777,-3.738)
N3: (28.286,-81.352,-2.169)
N6: (24.423,-81.509,-3.672)
N7: (25.386,-83.084,-1.110)
N9: (27.505,-82.885,-0.491)
O5': (29.310,-86.533,0.860)
O3': (30.711,-82.846,2.477)
C4: (22.172,-84.545,0.220)
N3: (22.569,-83.884,-0.910)
OP1: (14.771,-86.552,-0.622)
OP2: (16.691,-86.501,1.065)
C2: (21.777,-83.529,-1.954)
C1': (19.632,-83.488,-2.961)
C3': (18.347,-85.313,-3.705)
O5': (16.874,-85.334,-1.147)
O4': (18.321,-83.330,-2.496)
C5': (16.347,-84.680,-2.279)
P: (15.915,-85.831,-0.006)
C4': (17.437,-84.227,-3.198)
C2': (19.617,-84.561,-4.038)
O2': (19.497,-83.929,-5.289)
N1: (20.475,-83.865,-1.837)
O4: (22.987,-84.812,1.087)
O2: (22.163,-82.950,-2.930)
C6: (20.003,-84.522,-0.742)
C5: (20.793,-84.862,0.273)
O3': (17.803,-85.992,-4.802)
N3: (22.569,-83.884,-0.910)
OP1: (14.771,-86.552,-0.622)
OP2: (16.691,-86.501,1.065)
C2: (21.777,-83.529,-1.954)
C1': (19.632,-83.488,-2.961)
C3': (18.347,-85.313,-3.705)
O5': (16.874,-85.334,-1.147)
O4': (18.321,-83.330,-2.496)
C5': (16.347,-84.680,-2.279)
P: (15.915,-85.831,-0.006)
C4': (17.437,-84.227,-3.198)
C2': (19.617,-84.561,-4.038)
O2': (19.497,-83.929,-5.289)
N1: (20.475,-83.865,-1.837)
O4: (22.987,-84.812,1.087)
O2: (22.163,-82.950,-2.930)
C6: (20.003,-84.522,-0.742)
C5: (20.793,-84.862,0.273)
O3': (17.803,-85.992,-4.802)
Image (generated by PyMOL):