Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01077:01203
Extra
PDB:
ATOM 1 O3' A A1076 36.333 105.373 144.126 1.00 38.57 O
ATOM 2 P A A1077 37.840 105.660 144.605 1.00 42.91 P
ATOM 3 OP1 A A1077 38.228 104.619 145.596 1.00 42.45 O
ATOM 4 OP2 A A1077 37.935 107.095 144.967 1.00 43.01 O
ATOM 5 O5' A A1077 38.717 105.401 143.299 1.00 43.16 O
ATOM 6 C5' A A1077 38.599 106.259 142.156 1.00 42.01 C
ATOM 7 C4' A A1077 39.323 105.666 140.972 1.00 41.60 C
ATOM 8 O4' A A1077 38.752 104.365 140.625 1.00 41.55 O
ATOM 9 C3' A A1077 39.183 106.482 139.696 1.00 40.08 C
ATOM 10 O3' A A1077 40.022 107.603 139.602 1.00 38.96 O
ATOM 11 C2' A A1077 39.341 105.429 138.617 1.00 40.65 C
ATOM 12 O2' A A1077 40.678 105.023 138.425 1.00 39.20 O
ATOM 13 C1' A A1077 38.482 104.322 139.228 1.00 40.75 C
ATOM 14 N9 A A1077 37.067 104.657 139.045 1.00 41.30 N
ATOM 15 C8 A A1077 36.479 105.912 138.953 1.00 42.28 C
ATOM 16 N7 A A1077 35.182 105.884 138.785 1.00 40.00 N
ATOM 17 C5 A A1077 34.891 104.535 138.772 1.00 41.14 C
ATOM 18 C6 A A1077 33.695 103.858 138.642 1.00 43.35 C
ATOM 19 N6 A A1077 32.521 104.466 138.514 1.00 44.11 N
ATOM 20 N1 A A1077 33.738 102.511 138.654 1.00 47.64 N
ATOM 21 C2 A A1077 34.935 101.904 138.804 1.00 46.57 C
ATOM 22 N3 A A1077 36.137 102.437 138.954 1.00 40.27 N
ATOM 23 C4 A A1077 36.045 103.769 138.926 1.00 40.54 C
ATOM 24 P G A1078 39.361 109.042 139.337 1.00 41.53 P
ATOM 25 OP1 G A1078 40.484 110.002 139.129 1.00 41.54 O
ATOM 26 OP2 G A1078 38.348 109.312 140.396 1.00 43.05 O
ATOM 27 O5' G A1078 38.600 108.852 137.950 1.00 39.31 O
TER
ATOM 1 O3' C B1202 24.455 109.940 135.456 1.00 39.87 O
ATOM 2 P U B1203 24.498 109.995 137.066 1.00 38.26 P
ATOM 3 OP1 U B1203 23.082 109.735 137.424 1.00 39.63 O
ATOM 4 OP2 U B1203 25.170 111.223 137.566 1.00 36.40 O
ATOM 5 O5' U B1203 25.366 108.726 137.483 1.00 36.56 O
ATOM 6 C5' U B1203 25.048 107.426 136.957 1.00 38.40 C
ATOM 7 C4' U B1203 25.691 106.343 137.790 1.00 39.92 C
ATOM 8 O4' U B1203 27.139 106.402 137.638 1.00 39.81 O
ATOM 9 C3' U B1203 25.418 106.410 139.291 1.00 41.03 C
ATOM 10 O3' U B1203 25.357 105.085 139.813 1.00 42.81 O
ATOM 11 C2' U B1203 26.662 107.118 139.816 1.00 40.66 C
ATOM 12 O2' U B1203 26.947 106.844 141.172 1.00 41.83 O
ATOM 13 C1' U B1203 27.733 106.513 138.913 1.00 38.94 C
ATOM 14 N1 U B1203 28.991 107.268 138.808 1.00 35.85 N
ATOM 15 C2 U B1203 30.145 106.533 138.676 1.00 33.64 C
ATOM 16 O2 U B1203 30.138 105.321 138.576 1.00 32.71 O
ATOM 17 N3 U B1203 31.305 107.265 138.658 1.00 33.04 N
ATOM 18 C4 U B1203 31.420 108.639 138.737 1.00 36.29 C
ATOM 19 O4 U B1203 32.541 109.159 138.742 1.00 37.55 O
ATOM 20 C5 U B1203 30.175 109.334 138.835 1.00 35.74 C
ATOM 21 C6 U B1203 29.032 108.644 138.864 1.00 36.09 C
ATOM 22 P C B1204 24.560 104.796 141.182 1.00 43.92 P
ATOM 23 OP1 C B1204 23.744 105.989 141.545 1.00 41.53 O
ATOM 24 OP2 C B1204 25.549 104.267 142.156 1.00 42.34 O
ATOM 25 O5' C B1204 23.564 103.619 140.788 1.00 40.32 O
TER
ATOM 2 P A A1077 37.840 105.660 144.605 1.00 42.91 P
ATOM 3 OP1 A A1077 38.228 104.619 145.596 1.00 42.45 O
ATOM 4 OP2 A A1077 37.935 107.095 144.967 1.00 43.01 O
ATOM 5 O5' A A1077 38.717 105.401 143.299 1.00 43.16 O
ATOM 6 C5' A A1077 38.599 106.259 142.156 1.00 42.01 C
ATOM 7 C4' A A1077 39.323 105.666 140.972 1.00 41.60 C
ATOM 8 O4' A A1077 38.752 104.365 140.625 1.00 41.55 O
ATOM 9 C3' A A1077 39.183 106.482 139.696 1.00 40.08 C
ATOM 10 O3' A A1077 40.022 107.603 139.602 1.00 38.96 O
ATOM 11 C2' A A1077 39.341 105.429 138.617 1.00 40.65 C
ATOM 12 O2' A A1077 40.678 105.023 138.425 1.00 39.20 O
ATOM 13 C1' A A1077 38.482 104.322 139.228 1.00 40.75 C
ATOM 14 N9 A A1077 37.067 104.657 139.045 1.00 41.30 N
ATOM 15 C8 A A1077 36.479 105.912 138.953 1.00 42.28 C
ATOM 16 N7 A A1077 35.182 105.884 138.785 1.00 40.00 N
ATOM 17 C5 A A1077 34.891 104.535 138.772 1.00 41.14 C
ATOM 18 C6 A A1077 33.695 103.858 138.642 1.00 43.35 C
ATOM 19 N6 A A1077 32.521 104.466 138.514 1.00 44.11 N
ATOM 20 N1 A A1077 33.738 102.511 138.654 1.00 47.64 N
ATOM 21 C2 A A1077 34.935 101.904 138.804 1.00 46.57 C
ATOM 22 N3 A A1077 36.137 102.437 138.954 1.00 40.27 N
ATOM 23 C4 A A1077 36.045 103.769 138.926 1.00 40.54 C
ATOM 24 P G A1078 39.361 109.042 139.337 1.00 41.53 P
ATOM 25 OP1 G A1078 40.484 110.002 139.129 1.00 41.54 O
ATOM 26 OP2 G A1078 38.348 109.312 140.396 1.00 43.05 O
ATOM 27 O5' G A1078 38.600 108.852 137.950 1.00 39.31 O
TER
ATOM 1 O3' C B1202 24.455 109.940 135.456 1.00 39.87 O
ATOM 2 P U B1203 24.498 109.995 137.066 1.00 38.26 P
ATOM 3 OP1 U B1203 23.082 109.735 137.424 1.00 39.63 O
ATOM 4 OP2 U B1203 25.170 111.223 137.566 1.00 36.40 O
ATOM 5 O5' U B1203 25.366 108.726 137.483 1.00 36.56 O
ATOM 6 C5' U B1203 25.048 107.426 136.957 1.00 38.40 C
ATOM 7 C4' U B1203 25.691 106.343 137.790 1.00 39.92 C
ATOM 8 O4' U B1203 27.139 106.402 137.638 1.00 39.81 O
ATOM 9 C3' U B1203 25.418 106.410 139.291 1.00 41.03 C
ATOM 10 O3' U B1203 25.357 105.085 139.813 1.00 42.81 O
ATOM 11 C2' U B1203 26.662 107.118 139.816 1.00 40.66 C
ATOM 12 O2' U B1203 26.947 106.844 141.172 1.00 41.83 O
ATOM 13 C1' U B1203 27.733 106.513 138.913 1.00 38.94 C
ATOM 14 N1 U B1203 28.991 107.268 138.808 1.00 35.85 N
ATOM 15 C2 U B1203 30.145 106.533 138.676 1.00 33.64 C
ATOM 16 O2 U B1203 30.138 105.321 138.576 1.00 32.71 O
ATOM 17 N3 U B1203 31.305 107.265 138.658 1.00 33.04 N
ATOM 18 C4 U B1203 31.420 108.639 138.737 1.00 36.29 C
ATOM 19 O4 U B1203 32.541 109.159 138.742 1.00 37.55 O
ATOM 20 C5 U B1203 30.175 109.334 138.835 1.00 35.74 C
ATOM 21 C6 U B1203 29.032 108.644 138.864 1.00 36.09 C
ATOM 22 P C B1204 24.560 104.796 141.182 1.00 43.92 P
ATOM 23 OP1 C B1204 23.744 105.989 141.545 1.00 41.53 O
ATOM 24 OP2 C B1204 25.549 104.267 142.156 1.00 42.34 O
ATOM 25 O5' C B1204 23.564 103.619 140.788 1.00 40.32 O
TER
Atoms:
OP1: (38.228,104.619,145.596)
OP2: (37.935,107.095,144.967)
C3': (39.183,106.482,139.696)
C1': (38.482,104.322,139.228)
C5': (38.599,106.259,142.156)
O4': (38.752,104.365,140.625)
C8: (36.479,105.912,138.953)
O2': (40.678,105.023,138.425)
C6: (33.695,103.858,138.642)
C5: (34.891,104.535,138.772)
C4: (36.045,103.769,138.926)
P: (37.840,105.660,144.605)
C4': (39.323,105.666,140.972)
C2': (39.341,105.429,138.617)
C2: (34.935,101.904,138.804)
N1: (33.738,102.511,138.654)
N3: (36.137,102.437,138.954)
N6: (32.521,104.466,138.514)
N7: (35.182,105.884,138.785)
N9: (37.067,104.657,139.045)
O5': (38.717,105.401,143.299)
O3': (40.022,107.603,139.602)
OP2: (37.935,107.095,144.967)
C3': (39.183,106.482,139.696)
C1': (38.482,104.322,139.228)
C5': (38.599,106.259,142.156)
O4': (38.752,104.365,140.625)
C8: (36.479,105.912,138.953)
O2': (40.678,105.023,138.425)
C6: (33.695,103.858,138.642)
C5: (34.891,104.535,138.772)
C4: (36.045,103.769,138.926)
P: (37.840,105.660,144.605)
C4': (39.323,105.666,140.972)
C2': (39.341,105.429,138.617)
C2: (34.935,101.904,138.804)
N1: (33.738,102.511,138.654)
N3: (36.137,102.437,138.954)
N6: (32.521,104.466,138.514)
N7: (35.182,105.884,138.785)
N9: (37.067,104.657,139.045)
O5': (38.717,105.401,143.299)
O3': (40.022,107.603,139.602)
C4: (31.420,108.639,138.737)
N3: (31.305,107.265,138.658)
OP1: (23.082,109.735,137.424)
OP2: (25.170,111.223,137.566)
C2: (30.145,106.533,138.676)
C1': (27.733,106.513,138.913)
C3': (25.418,106.410,139.291)
O5': (25.366,108.726,137.483)
O4': (27.139,106.402,137.638)
C5': (25.048,107.426,136.957)
P: (24.498,109.995,137.066)
C4': (25.691,106.343,137.790)
C2': (26.662,107.118,139.816)
O2': (26.947,106.844,141.172)
N1: (28.991,107.268,138.808)
O4: (32.541,109.159,138.742)
O2: (30.138,105.321,138.576)
C6: (29.032,108.644,138.864)
C5: (30.175,109.334,138.835)
O3': (25.357,105.085,139.813)
N3: (31.305,107.265,138.658)
OP1: (23.082,109.735,137.424)
OP2: (25.170,111.223,137.566)
C2: (30.145,106.533,138.676)
C1': (27.733,106.513,138.913)
C3': (25.418,106.410,139.291)
O5': (25.366,108.726,137.483)
O4': (27.139,106.402,137.638)
C5': (25.048,107.426,136.957)
P: (24.498,109.995,137.066)
C4': (25.691,106.343,137.790)
C2': (26.662,107.118,139.816)
O2': (26.947,106.844,141.172)
N1: (28.991,107.268,138.808)
O4: (32.541,109.159,138.742)
O2: (30.138,105.321,138.576)
C6: (29.032,108.644,138.864)
C5: (30.175,109.334,138.835)
O3': (25.357,105.085,139.813)
Image (generated by PyMOL):