ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A1924:A1954

Extra

PDB:
ATOM 1 O3' U A1923 100.256 121.299 112.346 1.00 45.73 O
ATOM 2 P A A1924 99.845 122.746 111.744 1.00 47.30 P
ATOM 3 OP1 A A1924 100.161 123.815 112.732 1.00 47.56 O
ATOM 4 OP2 A A1924 98.450 122.575 111.287 1.00 47.38 O
ATOM 5 O5' A A1924 100.764 122.922 110.458 1.00 45.06 O
ATOM 6 C5' A A1924 101.823 123.886 110.442 1.00 45.84 C
ATOM 7 C4' A A1924 102.362 124.066 109.033 1.00 47.53 C
ATOM 8 O4' A A1924 103.166 122.917 108.637 1.00 46.75 O
ATOM 9 C3' A A1924 101.328 124.292 107.923 1.00 48.29 C
ATOM 10 O3' A A1924 101.816 125.264 106.981 1.00 49.17 O
ATOM 11 C2' A A1924 101.273 122.925 107.246 1.00 48.30 C
ATOM 12 O2' A A1924 100.958 122.934 105.871 1.00 50.12 O
ATOM 13 C1' A A1924 102.715 122.452 107.398 1.00 46.69 C
ATOM 14 N9 A A1924 102.892 121.008 107.333 1.00 45.10 N
ATOM 15 C8 A A1924 101.978 120.020 107.615 1.00 44.76 C
ATOM 16 N7 A A1924 102.411 118.811 107.361 1.00 44.91 N
ATOM 17 C5 A A1924 103.707 119.014 106.897 1.00 45.15 C
ATOM 18 C6 A A1924 104.706 118.127 106.442 1.00 44.91 C
ATOM 19 N6 A A1924 104.533 116.802 106.329 1.00 44.12 N
ATOM 20 N1 A A1924 105.899 118.660 106.089 1.00 44.45 N
ATOM 21 C2 A A1924 106.060 119.984 106.165 1.00 43.18 C
ATOM 22 N3 A A1924 105.196 120.919 106.547 1.00 43.30 N
ATOM 23 C4 A A1924 104.025 120.363 106.906 1.00 44.80 C
ATOM 24 P G A1925 101.198 126.757 106.946 1.00 48.79 P
ATOM 25 OP1 G A1925 102.258 127.588 106.343 1.00 50.46 O
ATOM 26 OP2 G A1925 100.615 127.157 108.253 1.00 47.00 O
ATOM 27 O5' G A1925 100.008 126.673 105.899 1.00 49.12 O
TER

ATOM 1 O3' A B1953 103.098 111.777 103.513 1.00 59.78 O
ATOM 2 P U B1954 104.473 112.474 104.016 1.00 58.77 P
ATOM 3 OP1 U B1954 105.667 111.821 103.400 1.00 58.67 O
ATOM 4 OP2 U B1954 104.431 112.690 105.473 1.00 60.75 O
ATOM 5 O5' U B1954 104.345 113.912 103.379 1.00 58.34 O
ATOM 6 C5' U B1954 105.053 114.238 102.202 1.00 56.59 C
ATOM 7 C4' U B1954 105.616 115.623 102.338 1.00 57.09 C
ATOM 8 O4' U B1954 106.133 115.821 103.679 1.00 57.52 O
ATOM 9 C3' U B1954 106.759 115.906 101.400 1.00 55.83 C
ATOM 10 O3' U B1954 106.260 116.350 100.161 1.00 55.11 O
ATOM 11 C2' U B1954 107.552 116.962 102.150 1.00 56.49 C
ATOM 12 O2' U B1954 107.104 118.281 101.929 1.00 55.95 O
ATOM 13 C1' U B1954 107.345 116.540 103.613 1.00 57.53 C
ATOM 14 N1 U B1954 108.414 115.647 104.091 1.00 59.76 N
ATOM 15 C2 U B1954 109.721 116.086 104.006 1.00 60.86 C
ATOM 16 O2 U B1954 110.028 117.183 103.594 1.00 61.32 O
ATOM 17 N3 U B1954 110.661 115.186 104.432 1.00 62.34 N
ATOM 18 C4 U B1954 110.441 113.931 104.942 1.00 63.34 C
ATOM 19 O4 U B1954 111.404 113.252 105.309 1.00 65.23 O
ATOM 20 C5 U B1954 109.068 113.550 105.015 1.00 63.20 C
ATOM 21 C6 U B1954 108.126 114.398 104.596 1.00 61.43 C
ATOM 22 P G B1955 106.857 115.733 98.816 1.00 55.60 P
ATOM 23 OP1 G B1955 106.168 116.345 97.671 1.00 56.34 O
ATOM 24 OP2 G B1955 106.825 114.250 98.999 1.00 58.03 O
ATOM 25 O5' G B1955 108.345 116.272 98.826 1.00 56.99 O
TER

Atoms:
OP1: (100.161,123.815,112.732)
OP2: (98.450,122.575,111.287)
C3': (101.328,124.292,107.923)
C1': (102.715,122.452,107.398)
C5': (101.823,123.886,110.442)
O4': (103.166,122.917,108.637)
C8: (101.978,120.020,107.615)
O2': (100.958,122.934,105.871)
C6: (104.706,118.127,106.442)
C5: (103.707,119.014,106.897)
C4: (104.025,120.363,106.906)
P: (99.845,122.746,111.744)
C4': (102.362,124.066,109.033)
C2': (101.273,122.925,107.246)
C2: (106.060,119.984,106.165)
N1: (105.899,118.660,106.089)
N3: (105.196,120.919,106.547)
N6: (104.533,116.802,106.329)
N7: (102.411,118.811,107.361)
N9: (102.892,121.008,107.333)
O5': (100.764,122.922,110.458)
O3': (101.816,125.264,106.981)
C4: (110.441,113.931,104.942)
N3: (110.661,115.186,104.432)
OP1: (105.667,111.821,103.400)
OP2: (104.431,112.690,105.473)
C2: (109.721,116.086,104.006)
C1': (107.345,116.540,103.613)
C3': (106.759,115.906,101.400)
O5': (104.345,113.912,103.379)
O4': (106.133,115.821,103.679)
C5': (105.053,114.238,102.202)
P: (104.473,112.474,104.016)
C4': (105.616,115.623,102.338)
C2': (107.552,116.962,102.150)
O2': (107.104,118.281,101.929)
N1: (108.414,115.647,104.091)
O4: (111.404,113.252,105.309)
O2: (110.028,117.183,103.594)
C6: (108.126,114.398,104.596)
C5: (109.068,113.550,105.015)
O3': (106.260,116.350,100.161)
Image (generated by PyMOL):
PyMOL image
show in jmol