Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:9114:9113
Extra
PDB:
ATOM 1 O3' G A 113 49.553 30.505 108.639 1.00 54.70 O
ATOM 2 P C A 114 48.832 29.361 107.769 1.00 57.03 P
ATOM 3 OP1 C A 114 47.898 28.678 108.698 1.00 58.57 O
ATOM 4 OP2 C A 114 49.842 28.561 107.024 1.00 55.27 O
ATOM 5 O5' C A 114 47.954 30.182 106.725 1.00 55.55 O
ATOM 6 C5' C A 114 46.967 31.122 107.183 1.00 53.10 C
ATOM 7 C4' C A 114 46.582 32.060 106.067 1.00 53.33 C
ATOM 8 O4' C A 114 47.696 32.930 105.746 1.00 51.41 O
ATOM 9 C3' C A 114 46.259 31.384 104.749 1.00 54.65 C
ATOM 10 O3' C A 114 44.942 30.858 104.717 1.00 56.27 O
ATOM 11 C2' C A 114 46.476 32.509 103.753 1.00 53.57 C
ATOM 12 O2' C A 114 45.400 33.423 103.738 1.00 56.38 O
ATOM 13 C1' C A 114 47.711 33.186 104.348 1.00 52.11 C
ATOM 14 N1 C A 114 48.972 32.663 103.786 1.00 49.99 N
ATOM 15 C2 C A 114 49.383 33.099 102.520 1.00 48.43 C
ATOM 16 O2 C A 114 48.683 33.916 101.907 1.00 47.66 O
ATOM 17 N3 C A 114 50.532 32.618 101.999 1.00 47.59 N
ATOM 18 C4 C A 114 51.262 31.737 102.690 1.00 49.44 C
ATOM 19 N4 C A 114 52.393 31.278 102.138 1.00 48.66 N
ATOM 20 C5 C A 114 50.868 31.282 103.981 1.00 49.69 C
ATOM 21 C6 C A 114 49.729 31.765 104.485 1.00 49.36 C
ATOM 22 P C A 115 44.656 29.501 103.907 1.00 58.83 P
ATOM 23 OP1 C A 115 43.266 29.092 104.227 1.00 60.48 O
ATOM 24 OP2 C A 115 45.779 28.556 104.161 1.00 57.28 O
ATOM 25 O5' C A 115 44.717 29.947 102.375 1.00 57.24 O
TER
ATOM 1 O3' C B 112 54.700 30.159 112.840 1.00 52.70 O
ATOM 2 P G B 113 54.202 29.357 111.547 1.00 54.13 P
ATOM 3 OP1 G B 113 53.181 28.368 111.968 1.00 54.47 O
ATOM 4 OP2 G B 113 55.401 28.907 110.792 1.00 54.63 O
ATOM 5 O5' G B 113 53.458 30.477 110.701 1.00 54.55 O
ATOM 6 C5' G B 113 52.530 30.132 109.671 1.00 53.06 C
ATOM 7 C4' G B 113 51.694 31.332 109.319 1.00 53.28 C
ATOM 8 O4' G B 113 52.550 32.428 108.901 1.00 52.67 O
ATOM 9 C3' G B 113 50.741 31.122 108.160 1.00 53.14 C
ATOM 10 O3' G B 113 49.553 30.505 108.639 1.00 54.70 O
ATOM 11 C2' G B 113 50.526 32.545 107.662 1.00 51.52 C
ATOM 12 O2' G B 113 49.622 33.258 108.482 1.00 50.12 O
ATOM 13 C1' G B 113 51.928 33.140 107.842 1.00 51.21 C
ATOM 14 N9 G B 113 52.792 33.042 106.666 1.00 49.63 N
ATOM 15 C8 G B 113 53.922 32.268 106.530 1.00 48.42 C
ATOM 16 N7 G B 113 54.497 32.397 105.366 1.00 46.85 N
ATOM 17 C5 G B 113 53.699 33.303 104.688 1.00 46.58 C
ATOM 18 C6 G B 113 53.819 33.821 103.384 1.00 46.55 C
ATOM 19 O6 G B 113 54.684 33.572 102.540 1.00 46.72 O
ATOM 20 N1 G B 113 52.790 34.715 103.090 1.00 46.35 N
ATOM 21 C2 G B 113 51.773 35.059 103.946 1.00 45.89 C
ATOM 22 N2 G B 113 50.867 35.920 103.481 1.00 44.89 N
ATOM 23 N3 G B 113 51.653 34.584 105.171 1.00 48.21 N
ATOM 24 C4 G B 113 52.642 33.714 105.475 1.00 48.78 C
ATOM 25 P C B 114 48.832 29.361 107.769 1.00 57.03 P
ATOM 26 OP1 C B 114 47.898 28.678 108.698 1.00 58.57 O
ATOM 27 OP2 C B 114 49.842 28.561 107.024 1.00 55.27 O
ATOM 28 O5' C B 114 47.954 30.182 106.725 1.00 55.55 O
TER
ATOM 2 P C A 114 48.832 29.361 107.769 1.00 57.03 P
ATOM 3 OP1 C A 114 47.898 28.678 108.698 1.00 58.57 O
ATOM 4 OP2 C A 114 49.842 28.561 107.024 1.00 55.27 O
ATOM 5 O5' C A 114 47.954 30.182 106.725 1.00 55.55 O
ATOM 6 C5' C A 114 46.967 31.122 107.183 1.00 53.10 C
ATOM 7 C4' C A 114 46.582 32.060 106.067 1.00 53.33 C
ATOM 8 O4' C A 114 47.696 32.930 105.746 1.00 51.41 O
ATOM 9 C3' C A 114 46.259 31.384 104.749 1.00 54.65 C
ATOM 10 O3' C A 114 44.942 30.858 104.717 1.00 56.27 O
ATOM 11 C2' C A 114 46.476 32.509 103.753 1.00 53.57 C
ATOM 12 O2' C A 114 45.400 33.423 103.738 1.00 56.38 O
ATOM 13 C1' C A 114 47.711 33.186 104.348 1.00 52.11 C
ATOM 14 N1 C A 114 48.972 32.663 103.786 1.00 49.99 N
ATOM 15 C2 C A 114 49.383 33.099 102.520 1.00 48.43 C
ATOM 16 O2 C A 114 48.683 33.916 101.907 1.00 47.66 O
ATOM 17 N3 C A 114 50.532 32.618 101.999 1.00 47.59 N
ATOM 18 C4 C A 114 51.262 31.737 102.690 1.00 49.44 C
ATOM 19 N4 C A 114 52.393 31.278 102.138 1.00 48.66 N
ATOM 20 C5 C A 114 50.868 31.282 103.981 1.00 49.69 C
ATOM 21 C6 C A 114 49.729 31.765 104.485 1.00 49.36 C
ATOM 22 P C A 115 44.656 29.501 103.907 1.00 58.83 P
ATOM 23 OP1 C A 115 43.266 29.092 104.227 1.00 60.48 O
ATOM 24 OP2 C A 115 45.779 28.556 104.161 1.00 57.28 O
ATOM 25 O5' C A 115 44.717 29.947 102.375 1.00 57.24 O
TER
ATOM 1 O3' C B 112 54.700 30.159 112.840 1.00 52.70 O
ATOM 2 P G B 113 54.202 29.357 111.547 1.00 54.13 P
ATOM 3 OP1 G B 113 53.181 28.368 111.968 1.00 54.47 O
ATOM 4 OP2 G B 113 55.401 28.907 110.792 1.00 54.63 O
ATOM 5 O5' G B 113 53.458 30.477 110.701 1.00 54.55 O
ATOM 6 C5' G B 113 52.530 30.132 109.671 1.00 53.06 C
ATOM 7 C4' G B 113 51.694 31.332 109.319 1.00 53.28 C
ATOM 8 O4' G B 113 52.550 32.428 108.901 1.00 52.67 O
ATOM 9 C3' G B 113 50.741 31.122 108.160 1.00 53.14 C
ATOM 10 O3' G B 113 49.553 30.505 108.639 1.00 54.70 O
ATOM 11 C2' G B 113 50.526 32.545 107.662 1.00 51.52 C
ATOM 12 O2' G B 113 49.622 33.258 108.482 1.00 50.12 O
ATOM 13 C1' G B 113 51.928 33.140 107.842 1.00 51.21 C
ATOM 14 N9 G B 113 52.792 33.042 106.666 1.00 49.63 N
ATOM 15 C8 G B 113 53.922 32.268 106.530 1.00 48.42 C
ATOM 16 N7 G B 113 54.497 32.397 105.366 1.00 46.85 N
ATOM 17 C5 G B 113 53.699 33.303 104.688 1.00 46.58 C
ATOM 18 C6 G B 113 53.819 33.821 103.384 1.00 46.55 C
ATOM 19 O6 G B 113 54.684 33.572 102.540 1.00 46.72 O
ATOM 20 N1 G B 113 52.790 34.715 103.090 1.00 46.35 N
ATOM 21 C2 G B 113 51.773 35.059 103.946 1.00 45.89 C
ATOM 22 N2 G B 113 50.867 35.920 103.481 1.00 44.89 N
ATOM 23 N3 G B 113 51.653 34.584 105.171 1.00 48.21 N
ATOM 24 C4 G B 113 52.642 33.714 105.475 1.00 48.78 C
ATOM 25 P C B 114 48.832 29.361 107.769 1.00 57.03 P
ATOM 26 OP1 C B 114 47.898 28.678 108.698 1.00 58.57 O
ATOM 27 OP2 C B 114 49.842 28.561 107.024 1.00 55.27 O
ATOM 28 O5' C B 114 47.954 30.182 106.725 1.00 55.55 O
TER
Atoms:
C2: (49.383,33.099,102.520)
OP1: (47.898,28.678,108.698)
OP2: (49.842,28.561,107.024)
C4: (51.262,31.737,102.690)
O5': (47.954,30.182,106.725)
C3': (46.259,31.384,104.749)
C1': (47.711,33.186,104.348)
O4': (47.696,32.930,105.746)
C5': (46.967,31.122,107.183)
P: (48.832,29.361,107.769)
O2: (48.683,33.916,101.907)
C4': (46.582,32.060,106.067)
C2': (46.476,32.509,103.753)
O2': (45.400,33.423,103.738)
N1: (48.972,32.663,103.786)
N3: (50.532,32.618,101.999)
N4: (52.393,31.278,102.138)
C6: (49.729,31.765,104.485)
C5: (50.868,31.282,103.981)
O3': (44.942,30.858,104.717)
OP1: (47.898,28.678,108.698)
OP2: (49.842,28.561,107.024)
C4: (51.262,31.737,102.690)
O5': (47.954,30.182,106.725)
C3': (46.259,31.384,104.749)
C1': (47.711,33.186,104.348)
O4': (47.696,32.930,105.746)
C5': (46.967,31.122,107.183)
P: (48.832,29.361,107.769)
O2: (48.683,33.916,101.907)
C4': (46.582,32.060,106.067)
C2': (46.476,32.509,103.753)
O2': (45.400,33.423,103.738)
N1: (48.972,32.663,103.786)
N3: (50.532,32.618,101.999)
N4: (52.393,31.278,102.138)
C6: (49.729,31.765,104.485)
C5: (50.868,31.282,103.981)
O3': (44.942,30.858,104.717)
OP1: (53.181,28.368,111.968)
OP2: (55.401,28.907,110.792)
C3': (50.741,31.122,108.160)
C1': (51.928,33.140,107.842)
C5': (52.530,30.132,109.671)
O6: (54.684,33.572,102.540)
O4': (52.550,32.428,108.901)
C8: (53.922,32.268,106.530)
C2: (51.773,35.059,103.946)
C6: (53.819,33.821,103.384)
C5: (53.699,33.303,104.688)
C4: (52.642,33.714,105.475)
P: (54.202,29.357,111.547)
C4': (51.694,31.332,109.319)
C2': (50.526,32.545,107.662)
O2': (49.622,33.258,108.482)
N1: (52.790,34.715,103.090)
N2: (50.867,35.920,103.481)
N3: (51.653,34.584,105.171)
N7: (54.497,32.397,105.366)
N9: (52.792,33.042,106.666)
O5': (53.458,30.477,110.701)
O3': (49.553,30.505,108.639)
OP2: (55.401,28.907,110.792)
C3': (50.741,31.122,108.160)
C1': (51.928,33.140,107.842)
C5': (52.530,30.132,109.671)
O6: (54.684,33.572,102.540)
O4': (52.550,32.428,108.901)
C8: (53.922,32.268,106.530)
C2: (51.773,35.059,103.946)
C6: (53.819,33.821,103.384)
C5: (53.699,33.303,104.688)
C4: (52.642,33.714,105.475)
P: (54.202,29.357,111.547)
C4': (51.694,31.332,109.319)
C2': (50.526,32.545,107.662)
O2': (49.622,33.258,108.482)
N1: (52.790,34.715,103.090)
N2: (50.867,35.920,103.481)
N3: (51.653,34.584,105.171)
N7: (54.497,32.397,105.366)
N9: (52.792,33.042,106.666)
O5': (53.458,30.477,110.701)
O3': (49.553,30.505,108.639)
Image (generated by PyMOL):