Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1547:A1560
Extra
PDB:
ATOM 1 O3' C A1546 32.463 -52.145 -8.251 1.00 60.04 O
ATOM 2 P A A1547 33.049 -53.671 -8.328 1.00 55.26 P
ATOM 3 OP1 A A1547 32.255 -54.523 -7.418 1.00 46.15 O
ATOM 4 OP2 A A1547 34.519 -53.557 -8.117 1.00 72.03 O
ATOM 5 O5' A A1547 32.804 -54.252 -9.801 1.00 44.09 O
ATOM 6 C5' A A1547 32.019 -55.432 -10.001 1.00 50.37 C
ATOM 7 C4' A A1547 32.648 -56.369 -11.022 1.00 45.85 C
ATOM 8 O4' A A1547 32.560 -55.835 -12.364 1.00 33.33 O
ATOM 9 C3' A A1547 34.083 -56.829 -10.815 1.00 50.20 C
ATOM 10 O3' A A1547 34.187 -58.252 -10.943 1.00 42.10 O
ATOM 11 C2' A A1547 34.846 -56.106 -11.925 1.00 43.85 C
ATOM 12 O2' A A1547 35.962 -56.849 -12.348 1.00 49.11 O
ATOM 13 C1' A A1547 33.791 -56.008 -13.023 1.00 38.07 C
ATOM 14 N9 A A1547 33.954 -54.885 -13.936 1.00 40.08 N
ATOM 15 C8 A A1547 34.523 -53.655 -13.721 1.00 42.44 C
ATOM 16 N7 A A1547 34.444 -52.854 -14.756 1.00 40.73 N
ATOM 17 C5 A A1547 33.790 -53.612 -15.715 1.00 37.57 C
ATOM 18 C6 A A1547 33.399 -53.331 -17.022 1.00 39.54 C
ATOM 19 N6 A A1547 33.566 -52.140 -17.594 1.00 47.66 N
ATOM 20 N1 A A1547 32.805 -54.311 -17.731 1.00 39.73 N
ATOM 21 C2 A A1547 32.587 -55.481 -17.134 1.00 38.86 C
ATOM 22 N3 A A1547 32.882 -55.857 -15.894 1.00 35.86 N
ATOM 23 C4 A A1547 33.497 -54.866 -15.231 1.00 37.97 C
ATOM 24 P A A1548 33.867 -59.168 -9.652 1.00 54.10 P
ATOM 25 OP1 A A1548 32.396 -59.085 -9.425 1.00 42.27 O
ATOM 26 OP2 A A1548 34.808 -58.872 -8.539 1.00 45.78 O
ATOM 27 O5' A A1548 34.249 -60.639 -10.089 1.00 48.71 O
TER
ATOM 1 O3' G B1559 42.409 -46.430 -12.815 1.00 44.48 O
ATOM 2 P U B1560 41.037 -45.639 -12.488 1.00 36.85 P
ATOM 3 OP1 U B1560 41.332 -44.189 -12.511 1.00 52.75 O
ATOM 4 OP2 U B1560 40.401 -46.232 -11.290 1.00 37.01 O
ATOM 5 O5' U B1560 40.049 -45.952 -13.700 1.00 42.81 O
ATOM 6 C5' U B1560 39.998 -45.093 -14.825 1.00 47.72 C
ATOM 7 C4' U B1560 38.954 -45.570 -15.809 1.00 54.27 C
ATOM 8 O4' U B1560 39.190 -46.970 -16.101 1.00 53.43 O
ATOM 9 C3' U B1560 37.491 -45.531 -15.392 1.00 51.05 C
ATOM 10 O3' U B1560 36.924 -44.263 -15.592 1.00 47.50 O
ATOM 11 C2' U B1560 36.873 -46.535 -16.352 1.00 52.79 C
ATOM 12 O2' U B1560 36.695 -46.042 -17.662 1.00 47.13 O
ATOM 13 C1' U B1560 37.959 -47.598 -16.407 1.00 51.19 C
ATOM 14 N1 U B1560 37.661 -48.563 -15.352 1.00 46.46 N
ATOM 15 C2 U B1560 36.669 -49.486 -15.602 1.00 52.83 C
ATOM 16 O2 U B1560 36.064 -49.545 -16.671 1.00 51.66 O
ATOM 17 N3 U B1560 36.399 -50.328 -14.558 1.00 54.85 N
ATOM 18 C4 U B1560 37.006 -50.327 -13.325 1.00 57.72 C
ATOM 19 O4 U B1560 36.631 -51.120 -12.458 1.00 63.00 O
ATOM 20 C5 U B1560 38.029 -49.342 -13.168 1.00 54.19 C
ATOM 21 C6 U B1560 38.316 -48.523 -14.165 1.00 48.44 C
ATOM 22 P G B1561 37.159 -43.120 -14.504 1.00 58.99 P
ATOM 23 OP1 G B1561 38.546 -42.640 -14.736 1.00 51.18 O
ATOM 24 OP2 G B1561 36.767 -43.607 -13.150 1.00 59.97 O
ATOM 25 O5' G B1561 36.133 -41.980 -14.962 1.00 60.63 O
TER
ATOM 2 P A A1547 33.049 -53.671 -8.328 1.00 55.26 P
ATOM 3 OP1 A A1547 32.255 -54.523 -7.418 1.00 46.15 O
ATOM 4 OP2 A A1547 34.519 -53.557 -8.117 1.00 72.03 O
ATOM 5 O5' A A1547 32.804 -54.252 -9.801 1.00 44.09 O
ATOM 6 C5' A A1547 32.019 -55.432 -10.001 1.00 50.37 C
ATOM 7 C4' A A1547 32.648 -56.369 -11.022 1.00 45.85 C
ATOM 8 O4' A A1547 32.560 -55.835 -12.364 1.00 33.33 O
ATOM 9 C3' A A1547 34.083 -56.829 -10.815 1.00 50.20 C
ATOM 10 O3' A A1547 34.187 -58.252 -10.943 1.00 42.10 O
ATOM 11 C2' A A1547 34.846 -56.106 -11.925 1.00 43.85 C
ATOM 12 O2' A A1547 35.962 -56.849 -12.348 1.00 49.11 O
ATOM 13 C1' A A1547 33.791 -56.008 -13.023 1.00 38.07 C
ATOM 14 N9 A A1547 33.954 -54.885 -13.936 1.00 40.08 N
ATOM 15 C8 A A1547 34.523 -53.655 -13.721 1.00 42.44 C
ATOM 16 N7 A A1547 34.444 -52.854 -14.756 1.00 40.73 N
ATOM 17 C5 A A1547 33.790 -53.612 -15.715 1.00 37.57 C
ATOM 18 C6 A A1547 33.399 -53.331 -17.022 1.00 39.54 C
ATOM 19 N6 A A1547 33.566 -52.140 -17.594 1.00 47.66 N
ATOM 20 N1 A A1547 32.805 -54.311 -17.731 1.00 39.73 N
ATOM 21 C2 A A1547 32.587 -55.481 -17.134 1.00 38.86 C
ATOM 22 N3 A A1547 32.882 -55.857 -15.894 1.00 35.86 N
ATOM 23 C4 A A1547 33.497 -54.866 -15.231 1.00 37.97 C
ATOM 24 P A A1548 33.867 -59.168 -9.652 1.00 54.10 P
ATOM 25 OP1 A A1548 32.396 -59.085 -9.425 1.00 42.27 O
ATOM 26 OP2 A A1548 34.808 -58.872 -8.539 1.00 45.78 O
ATOM 27 O5' A A1548 34.249 -60.639 -10.089 1.00 48.71 O
TER
ATOM 1 O3' G B1559 42.409 -46.430 -12.815 1.00 44.48 O
ATOM 2 P U B1560 41.037 -45.639 -12.488 1.00 36.85 P
ATOM 3 OP1 U B1560 41.332 -44.189 -12.511 1.00 52.75 O
ATOM 4 OP2 U B1560 40.401 -46.232 -11.290 1.00 37.01 O
ATOM 5 O5' U B1560 40.049 -45.952 -13.700 1.00 42.81 O
ATOM 6 C5' U B1560 39.998 -45.093 -14.825 1.00 47.72 C
ATOM 7 C4' U B1560 38.954 -45.570 -15.809 1.00 54.27 C
ATOM 8 O4' U B1560 39.190 -46.970 -16.101 1.00 53.43 O
ATOM 9 C3' U B1560 37.491 -45.531 -15.392 1.00 51.05 C
ATOM 10 O3' U B1560 36.924 -44.263 -15.592 1.00 47.50 O
ATOM 11 C2' U B1560 36.873 -46.535 -16.352 1.00 52.79 C
ATOM 12 O2' U B1560 36.695 -46.042 -17.662 1.00 47.13 O
ATOM 13 C1' U B1560 37.959 -47.598 -16.407 1.00 51.19 C
ATOM 14 N1 U B1560 37.661 -48.563 -15.352 1.00 46.46 N
ATOM 15 C2 U B1560 36.669 -49.486 -15.602 1.00 52.83 C
ATOM 16 O2 U B1560 36.064 -49.545 -16.671 1.00 51.66 O
ATOM 17 N3 U B1560 36.399 -50.328 -14.558 1.00 54.85 N
ATOM 18 C4 U B1560 37.006 -50.327 -13.325 1.00 57.72 C
ATOM 19 O4 U B1560 36.631 -51.120 -12.458 1.00 63.00 O
ATOM 20 C5 U B1560 38.029 -49.342 -13.168 1.00 54.19 C
ATOM 21 C6 U B1560 38.316 -48.523 -14.165 1.00 48.44 C
ATOM 22 P G B1561 37.159 -43.120 -14.504 1.00 58.99 P
ATOM 23 OP1 G B1561 38.546 -42.640 -14.736 1.00 51.18 O
ATOM 24 OP2 G B1561 36.767 -43.607 -13.150 1.00 59.97 O
ATOM 25 O5' G B1561 36.133 -41.980 -14.962 1.00 60.63 O
TER
Atoms:
OP1: (32.255,-54.523,-7.418)
OP2: (34.519,-53.557,-8.117)
C3': (34.083,-56.829,-10.815)
C1': (33.791,-56.008,-13.023)
C5': (32.019,-55.432,-10.001)
O4': (32.560,-55.835,-12.364)
C8: (34.523,-53.655,-13.721)
O2': (35.962,-56.849,-12.348)
C6: (33.399,-53.331,-17.022)
C5: (33.790,-53.612,-15.715)
C4: (33.497,-54.866,-15.231)
P: (33.049,-53.671,-8.328)
C4': (32.648,-56.369,-11.022)
C2': (34.846,-56.106,-11.925)
C2: (32.587,-55.481,-17.134)
N1: (32.805,-54.311,-17.731)
N3: (32.882,-55.857,-15.894)
N6: (33.566,-52.140,-17.594)
N7: (34.444,-52.854,-14.756)
N9: (33.954,-54.885,-13.936)
O5': (32.804,-54.252,-9.801)
O3': (34.187,-58.252,-10.943)
OP2: (34.519,-53.557,-8.117)
C3': (34.083,-56.829,-10.815)
C1': (33.791,-56.008,-13.023)
C5': (32.019,-55.432,-10.001)
O4': (32.560,-55.835,-12.364)
C8: (34.523,-53.655,-13.721)
O2': (35.962,-56.849,-12.348)
C6: (33.399,-53.331,-17.022)
C5: (33.790,-53.612,-15.715)
C4: (33.497,-54.866,-15.231)
P: (33.049,-53.671,-8.328)
C4': (32.648,-56.369,-11.022)
C2': (34.846,-56.106,-11.925)
C2: (32.587,-55.481,-17.134)
N1: (32.805,-54.311,-17.731)
N3: (32.882,-55.857,-15.894)
N6: (33.566,-52.140,-17.594)
N7: (34.444,-52.854,-14.756)
N9: (33.954,-54.885,-13.936)
O5': (32.804,-54.252,-9.801)
O3': (34.187,-58.252,-10.943)
C4: (37.006,-50.327,-13.325)
N3: (36.399,-50.328,-14.558)
OP1: (41.332,-44.189,-12.511)
OP2: (40.401,-46.232,-11.290)
C2: (36.669,-49.486,-15.602)
C1': (37.959,-47.598,-16.407)
C3': (37.491,-45.531,-15.392)
O5': (40.049,-45.952,-13.700)
O4': (39.190,-46.970,-16.101)
C5': (39.998,-45.093,-14.825)
P: (41.037,-45.639,-12.488)
C4': (38.954,-45.570,-15.809)
C2': (36.873,-46.535,-16.352)
O2': (36.695,-46.042,-17.662)
N1: (37.661,-48.563,-15.352)
O4: (36.631,-51.120,-12.458)
O2: (36.064,-49.545,-16.671)
C6: (38.316,-48.523,-14.165)
C5: (38.029,-49.342,-13.168)
O3': (36.924,-44.263,-15.592)
N3: (36.399,-50.328,-14.558)
OP1: (41.332,-44.189,-12.511)
OP2: (40.401,-46.232,-11.290)
C2: (36.669,-49.486,-15.602)
C1': (37.959,-47.598,-16.407)
C3': (37.491,-45.531,-15.392)
O5': (40.049,-45.952,-13.700)
O4': (39.190,-46.970,-16.101)
C5': (39.998,-45.093,-14.825)
P: (41.037,-45.639,-12.488)
C4': (38.954,-45.570,-15.809)
C2': (36.873,-46.535,-16.352)
O2': (36.695,-46.042,-17.662)
N1: (37.661,-48.563,-15.352)
O4: (36.631,-51.120,-12.458)
O2: (36.064,-49.545,-16.671)
C6: (38.316,-48.523,-14.165)
C5: (38.029,-49.342,-13.168)
O3': (36.924,-44.263,-15.592)
Image (generated by PyMOL):