Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:024:023
Extra
PDB:
ATOM 1 O3' G A 23 46.395 130.433 47.815 1.00 26.83 O
ATOM 2 P C A 24 47.184 129.460 46.805 1.00 27.90 P
ATOM 3 OP1 C A 24 48.603 129.427 47.184 1.00 27.25 O
ATOM 4 OP2 C A 24 46.811 129.829 45.407 1.00 32.52 O
ATOM 5 O5' C A 24 46.562 128.024 47.087 1.00 29.40 O
ATOM 6 C5' C A 24 46.631 127.418 48.390 1.00 26.46 C
ATOM 7 C4' C A 24 45.736 126.207 48.437 1.00 26.91 C
ATOM 8 O4' C A 24 44.343 126.618 48.345 1.00 29.80 O
ATOM 9 C3' C A 24 45.906 125.254 47.267 1.00 26.03 C
ATOM 10 O3' C A 24 47.025 124.408 47.454 1.00 24.22 O
ATOM 11 C2' C A 24 44.572 124.525 47.269 1.00 26.59 C
ATOM 12 O2' C A 24 44.456 123.606 48.333 1.00 27.36 O
ATOM 13 C1' C A 24 43.616 125.677 47.568 1.00 26.21 C
ATOM 14 N1 C A 24 43.112 126.349 46.350 1.00 28.26 N
ATOM 15 C2 C A 24 42.073 125.745 45.624 1.00 26.85 C
ATOM 16 O2 C A 24 41.651 124.648 45.984 1.00 29.31 O
ATOM 17 N3 C A 24 41.568 126.369 44.542 1.00 27.48 N
ATOM 18 C4 C A 24 42.064 127.545 44.157 1.00 30.21 C
ATOM 19 N4 C A 24 41.510 128.137 43.093 1.00 27.11 N
ATOM 20 C5 C A 24 43.145 128.172 44.852 1.00 28.87 C
ATOM 21 C6 C A 24 43.632 127.546 45.934 1.00 28.35 C
ATOM 22 P U A 25 47.914 123.976 46.193 1.00 21.88 P
ATOM 23 OP1 U A 25 49.112 123.277 46.715 1.00 23.08 O
ATOM 24 OP2 U A 25 48.077 125.127 45.287 1.00 25.77 O
ATOM 25 O5' U A 25 47.018 122.912 45.425 1.00 26.65 O
TER
ATOM 1 O3' G B 22 43.773 136.562 45.879 1.00 26.65 O
ATOM 2 P G B 23 44.704 135.379 45.331 1.00 29.07 P
ATOM 3 OP1 G B 23 46.044 135.943 45.063 1.00 28.55 O
ATOM 4 OP2 G B 23 43.976 134.673 44.248 1.00 31.61 O
ATOM 5 O5' G B 23 44.835 134.407 46.586 1.00 31.19 O
ATOM 6 C5' G B 23 45.179 133.020 46.425 1.00 29.27 C
ATOM 7 C4' G B 23 44.805 132.247 47.665 1.00 29.01 C
ATOM 8 O4' G B 23 43.379 132.380 47.935 1.00 29.84 O
ATOM 9 C3' G B 23 45.028 130.752 47.566 1.00 27.00 C
ATOM 10 O3' G B 23 46.395 130.433 47.815 1.00 26.83 O
ATOM 11 C2' G B 23 44.075 130.223 48.629 1.00 27.53 C
ATOM 12 O2' G B 23 44.570 130.399 49.940 1.00 27.67 O
ATOM 13 C1' G B 23 42.871 131.155 48.448 1.00 28.56 C
ATOM 14 N9 G B 23 41.863 130.647 47.514 1.00 30.40 N
ATOM 15 C8 G B 23 41.412 131.276 46.380 1.00 30.63 C
ATOM 16 N7 G B 23 40.526 130.583 45.724 1.00 30.19 N
ATOM 17 C5 G B 23 40.369 129.426 46.470 1.00 29.29 C
ATOM 18 C6 G B 23 39.530 128.298 46.250 1.00 29.47 C
ATOM 19 O6 G B 23 38.737 128.097 45.328 1.00 28.13 O
ATOM 20 N1 G B 23 39.682 127.346 47.250 1.00 29.71 N
ATOM 21 C2 G B 23 40.522 127.462 48.323 1.00 29.91 C
ATOM 22 N2 G B 23 40.511 126.435 49.178 1.00 29.09 N
ATOM 23 N3 G B 23 41.310 128.507 48.542 1.00 28.23 N
ATOM 24 C4 G B 23 41.182 129.445 47.582 1.00 28.81 C
ATOM 25 P C B 24 47.184 129.460 46.805 1.00 27.90 P
ATOM 26 OP1 C B 24 48.603 129.427 47.184 1.00 27.25 O
ATOM 27 OP2 C B 24 46.811 129.829 45.407 1.00 32.52 O
ATOM 28 O5' C B 24 46.562 128.024 47.087 1.00 29.40 O
TER
ATOM 2 P C A 24 47.184 129.460 46.805 1.00 27.90 P
ATOM 3 OP1 C A 24 48.603 129.427 47.184 1.00 27.25 O
ATOM 4 OP2 C A 24 46.811 129.829 45.407 1.00 32.52 O
ATOM 5 O5' C A 24 46.562 128.024 47.087 1.00 29.40 O
ATOM 6 C5' C A 24 46.631 127.418 48.390 1.00 26.46 C
ATOM 7 C4' C A 24 45.736 126.207 48.437 1.00 26.91 C
ATOM 8 O4' C A 24 44.343 126.618 48.345 1.00 29.80 O
ATOM 9 C3' C A 24 45.906 125.254 47.267 1.00 26.03 C
ATOM 10 O3' C A 24 47.025 124.408 47.454 1.00 24.22 O
ATOM 11 C2' C A 24 44.572 124.525 47.269 1.00 26.59 C
ATOM 12 O2' C A 24 44.456 123.606 48.333 1.00 27.36 O
ATOM 13 C1' C A 24 43.616 125.677 47.568 1.00 26.21 C
ATOM 14 N1 C A 24 43.112 126.349 46.350 1.00 28.26 N
ATOM 15 C2 C A 24 42.073 125.745 45.624 1.00 26.85 C
ATOM 16 O2 C A 24 41.651 124.648 45.984 1.00 29.31 O
ATOM 17 N3 C A 24 41.568 126.369 44.542 1.00 27.48 N
ATOM 18 C4 C A 24 42.064 127.545 44.157 1.00 30.21 C
ATOM 19 N4 C A 24 41.510 128.137 43.093 1.00 27.11 N
ATOM 20 C5 C A 24 43.145 128.172 44.852 1.00 28.87 C
ATOM 21 C6 C A 24 43.632 127.546 45.934 1.00 28.35 C
ATOM 22 P U A 25 47.914 123.976 46.193 1.00 21.88 P
ATOM 23 OP1 U A 25 49.112 123.277 46.715 1.00 23.08 O
ATOM 24 OP2 U A 25 48.077 125.127 45.287 1.00 25.77 O
ATOM 25 O5' U A 25 47.018 122.912 45.425 1.00 26.65 O
TER
ATOM 1 O3' G B 22 43.773 136.562 45.879 1.00 26.65 O
ATOM 2 P G B 23 44.704 135.379 45.331 1.00 29.07 P
ATOM 3 OP1 G B 23 46.044 135.943 45.063 1.00 28.55 O
ATOM 4 OP2 G B 23 43.976 134.673 44.248 1.00 31.61 O
ATOM 5 O5' G B 23 44.835 134.407 46.586 1.00 31.19 O
ATOM 6 C5' G B 23 45.179 133.020 46.425 1.00 29.27 C
ATOM 7 C4' G B 23 44.805 132.247 47.665 1.00 29.01 C
ATOM 8 O4' G B 23 43.379 132.380 47.935 1.00 29.84 O
ATOM 9 C3' G B 23 45.028 130.752 47.566 1.00 27.00 C
ATOM 10 O3' G B 23 46.395 130.433 47.815 1.00 26.83 O
ATOM 11 C2' G B 23 44.075 130.223 48.629 1.00 27.53 C
ATOM 12 O2' G B 23 44.570 130.399 49.940 1.00 27.67 O
ATOM 13 C1' G B 23 42.871 131.155 48.448 1.00 28.56 C
ATOM 14 N9 G B 23 41.863 130.647 47.514 1.00 30.40 N
ATOM 15 C8 G B 23 41.412 131.276 46.380 1.00 30.63 C
ATOM 16 N7 G B 23 40.526 130.583 45.724 1.00 30.19 N
ATOM 17 C5 G B 23 40.369 129.426 46.470 1.00 29.29 C
ATOM 18 C6 G B 23 39.530 128.298 46.250 1.00 29.47 C
ATOM 19 O6 G B 23 38.737 128.097 45.328 1.00 28.13 O
ATOM 20 N1 G B 23 39.682 127.346 47.250 1.00 29.71 N
ATOM 21 C2 G B 23 40.522 127.462 48.323 1.00 29.91 C
ATOM 22 N2 G B 23 40.511 126.435 49.178 1.00 29.09 N
ATOM 23 N3 G B 23 41.310 128.507 48.542 1.00 28.23 N
ATOM 24 C4 G B 23 41.182 129.445 47.582 1.00 28.81 C
ATOM 25 P C B 24 47.184 129.460 46.805 1.00 27.90 P
ATOM 26 OP1 C B 24 48.603 129.427 47.184 1.00 27.25 O
ATOM 27 OP2 C B 24 46.811 129.829 45.407 1.00 32.52 O
ATOM 28 O5' C B 24 46.562 128.024 47.087 1.00 29.40 O
TER
Atoms:
C2: (42.073,125.745,45.624)
OP1: (48.603,129.427,47.184)
OP2: (46.811,129.829,45.407)
C4: (42.064,127.545,44.157)
O5': (46.562,128.024,47.087)
C3': (45.906,125.254,47.267)
C1': (43.616,125.677,47.568)
O4': (44.343,126.618,48.345)
C5': (46.631,127.418,48.390)
P: (47.184,129.460,46.805)
O2: (41.651,124.648,45.984)
C4': (45.736,126.207,48.437)
C2': (44.572,124.525,47.269)
O2': (44.456,123.606,48.333)
N1: (43.112,126.349,46.350)
N3: (41.568,126.369,44.542)
N4: (41.510,128.137,43.093)
C6: (43.632,127.546,45.934)
C5: (43.145,128.172,44.852)
O3': (47.025,124.408,47.454)
OP1: (48.603,129.427,47.184)
OP2: (46.811,129.829,45.407)
C4: (42.064,127.545,44.157)
O5': (46.562,128.024,47.087)
C3': (45.906,125.254,47.267)
C1': (43.616,125.677,47.568)
O4': (44.343,126.618,48.345)
C5': (46.631,127.418,48.390)
P: (47.184,129.460,46.805)
O2: (41.651,124.648,45.984)
C4': (45.736,126.207,48.437)
C2': (44.572,124.525,47.269)
O2': (44.456,123.606,48.333)
N1: (43.112,126.349,46.350)
N3: (41.568,126.369,44.542)
N4: (41.510,128.137,43.093)
C6: (43.632,127.546,45.934)
C5: (43.145,128.172,44.852)
O3': (47.025,124.408,47.454)
OP1: (46.044,135.943,45.063)
OP2: (43.976,134.673,44.248)
C3': (45.028,130.752,47.566)
C1': (42.871,131.155,48.448)
C5': (45.179,133.020,46.425)
O6: (38.737,128.097,45.328)
O4': (43.379,132.380,47.935)
C8: (41.412,131.276,46.380)
C2: (40.522,127.462,48.323)
C6: (39.530,128.298,46.250)
C5: (40.369,129.426,46.470)
C4: (41.182,129.445,47.582)
P: (44.704,135.379,45.331)
C4': (44.805,132.247,47.665)
C2': (44.075,130.223,48.629)
O2': (44.570,130.399,49.940)
N1: (39.682,127.346,47.250)
N2: (40.511,126.435,49.178)
N3: (41.310,128.507,48.542)
N7: (40.526,130.583,45.724)
N9: (41.863,130.647,47.514)
O5': (44.835,134.407,46.586)
O3': (46.395,130.433,47.815)
OP2: (43.976,134.673,44.248)
C3': (45.028,130.752,47.566)
C1': (42.871,131.155,48.448)
C5': (45.179,133.020,46.425)
O6: (38.737,128.097,45.328)
O4': (43.379,132.380,47.935)
C8: (41.412,131.276,46.380)
C2: (40.522,127.462,48.323)
C6: (39.530,128.298,46.250)
C5: (40.369,129.426,46.470)
C4: (41.182,129.445,47.582)
P: (44.704,135.379,45.331)
C4': (44.805,132.247,47.665)
C2': (44.075,130.223,48.629)
O2': (44.570,130.399,49.940)
N1: (39.682,127.346,47.250)
N2: (40.511,126.435,49.178)
N3: (41.310,128.507,48.542)
N7: (40.526,130.583,45.724)
N9: (41.863,130.647,47.514)
O5': (44.835,134.407,46.586)
O3': (46.395,130.433,47.815)
Image (generated by PyMOL):