ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1055:A1056

Extra

PDB:
ATOM 1 O3' U A1054 9.344 94.661 110.527 1.00 41.39 O
ATOM 2 P U A1055 10.504 94.780 111.623 1.00 41.32 P
ATOM 3 OP1 U A1055 9.946 94.192 112.867 1.00 41.19 O
ATOM 4 OP2 U A1055 11.032 96.168 111.640 1.00 42.18 O
ATOM 5 O5' U A1055 11.622 93.805 111.039 1.00 39.73 O
ATOM 6 C5' U A1055 13.014 93.929 111.409 1.00 38.66 C
ATOM 7 C4' U A1055 13.908 93.279 110.363 1.00 38.34 C
ATOM 8 O4' U A1055 13.680 93.889 109.063 1.00 38.55 O
ATOM 9 C3' U A1055 15.399 93.475 110.584 1.00 36.32 C
ATOM 10 O3' U A1055 15.946 92.537 111.482 1.00 34.22 O
ATOM 11 C2' U A1055 15.978 93.307 109.190 1.00 36.19 C
ATOM 12 O2' U A1055 16.117 91.972 108.779 1.00 35.76 O
ATOM 13 C1' U A1055 14.904 93.976 108.346 1.00 36.71 C
ATOM 14 N1 U A1055 15.231 95.390 108.141 1.00 36.78 N
ATOM 15 C2 U A1055 16.305 95.685 107.325 1.00 37.19 C
ATOM 16 O2 U A1055 16.979 94.825 106.788 1.00 37.92 O
ATOM 17 N3 U A1055 16.559 97.027 107.170 1.00 38.33 N
ATOM 18 C4 U A1055 15.856 98.079 107.737 1.00 40.76 C
ATOM 19 O4 U A1055 16.092 99.236 107.371 1.00 41.61 O
ATOM 20 C5 U A1055 14.772 97.678 108.586 1.00 39.56 C
ATOM 21 C6 U A1055 14.502 96.386 108.747 1.00 37.99 C
ATOM 22 P A A1056 17.321 92.875 112.214 1.00 34.02 P
ATOM 23 OP1 A A1056 17.732 91.708 112.999 1.00 34.78 O
ATOM 24 OP2 A A1056 17.159 94.185 112.885 1.00 32.66 O
ATOM 25 O5' A A1056 18.338 92.985 111.004 1.00 33.29 O
TER

ATOM 1 O3' U B1055 15.946 92.537 111.482 1.00 34.22 O
ATOM 2 P A B1056 17.321 92.875 112.214 1.00 34.02 P
ATOM 3 OP1 A B1056 17.732 91.708 112.999 1.00 34.78 O
ATOM 4 OP2 A B1056 17.159 94.185 112.885 1.00 32.66 O
ATOM 5 O5' A B1056 18.338 92.985 111.004 1.00 33.29 O
ATOM 6 C5' A B1056 18.784 91.808 110.337 1.00 35.75 C
ATOM 7 C4' A B1056 20.037 92.106 109.570 1.00 38.40 C
ATOM 8 O4' A B1056 19.749 93.041 108.502 1.00 38.17 O
ATOM 9 C3' A B1056 21.145 92.763 110.378 1.00 38.85 C
ATOM 10 O3' A B1056 21.893 91.747 111.059 1.00 38.78 O
ATOM 11 C2' A B1056 21.961 93.436 109.285 1.00 39.42 C
ATOM 12 O2' A B1056 22.785 92.497 108.630 1.00 40.58 O
ATOM 13 C1' A B1056 20.867 93.878 108.304 1.00 38.31 C
ATOM 14 N9 A B1056 20.433 95.272 108.422 1.00 37.66 N
ATOM 15 C8 A B1056 19.317 95.801 109.027 1.00 37.47 C
ATOM 16 N7 A B1056 19.234 97.105 108.934 1.00 35.91 N
ATOM 17 C5 A B1056 20.373 97.459 108.232 1.00 36.21 C
ATOM 18 C6 A B1056 20.878 98.705 107.810 1.00 36.39 C
ATOM 19 N6 A B1056 20.276 99.876 108.054 1.00 32.52 N
ATOM 20 N1 A B1056 22.038 98.709 107.119 1.00 37.30 N
ATOM 21 C2 A B1056 22.639 97.534 106.876 1.00 38.26 C
ATOM 22 N3 A B1056 22.263 96.303 107.224 1.00 37.42 N
ATOM 23 C4 A B1056 21.114 96.339 107.907 1.00 37.03 C
ATOM 24 P A B1057 22.496 92.021 112.520 1.00 39.03 P
ATOM 25 OP1 A B1057 23.005 90.724 113.001 1.00 37.82 O
ATOM 26 OP2 A B1057 21.519 92.768 113.333 1.00 38.64 O
ATOM 27 O5' A B1057 23.701 93.016 112.262 1.00 37.00 O
TER

Atoms:
C4: (15.856,98.079,107.737)
N3: (16.559,97.027,107.170)
OP1: (9.946,94.192,112.867)
OP2: (11.032,96.168,111.640)
C2: (16.305,95.685,107.325)
C1': (14.904,93.976,108.346)
C3': (15.399,93.475,110.584)
O5': (11.622,93.805,111.039)
O4': (13.680,93.889,109.063)
C5': (13.014,93.929,111.409)
P: (10.504,94.780,111.623)
C4': (13.908,93.279,110.363)
C2': (15.978,93.307,109.190)
O2': (16.117,91.972,108.779)
N1: (15.231,95.390,108.141)
O4: (16.092,99.236,107.371)
O2: (16.979,94.825,106.788)
C6: (14.502,96.386,108.747)
C5: (14.772,97.678,108.586)
O3': (15.946,92.537,111.482)
OP1: (17.732,91.708,112.999)
OP2: (17.159,94.185,112.885)
C3': (21.145,92.763,110.378)
C1': (20.867,93.878,108.304)
C5': (18.784,91.808,110.337)
O4': (19.749,93.041,108.502)
C8: (19.317,95.801,109.027)
O2': (22.785,92.497,108.630)
C6: (20.878,98.705,107.810)
C5: (20.373,97.459,108.232)
C4: (21.114,96.339,107.907)
P: (17.321,92.875,112.214)
C4': (20.037,92.106,109.570)
C2': (21.961,93.436,109.285)
C2: (22.639,97.534,106.876)
N1: (22.038,98.709,107.119)
N3: (22.263,96.303,107.224)
N6: (20.276,99.876,108.054)
N7: (19.234,97.105,108.934)
N9: (20.433,95.272,108.422)
O5': (18.338,92.985,111.004)
O3': (21.893,91.747,111.059)
Image (generated by PyMOL):
PyMOL image
show in jmol