Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0557:0577
Extra
PDB:
ATOM 1 O3' G A 556 0.347 93.339 112.639 1.00 48.76 O
ATOM 2 P A A 557 -0.135 92.102 113.552 1.00 51.93 P
ATOM 3 OP1 A A 557 0.447 92.286 114.909 1.00 52.12 O
ATOM 4 OP2 A A 557 0.091 90.818 112.827 1.00 48.50 O
ATOM 5 O5' A A 557 -1.704 92.338 113.648 1.00 51.71 O
ATOM 6 C5' A A 557 -2.322 92.694 114.891 1.00 50.37 C
ATOM 7 C4' A A 557 -2.226 94.180 115.117 1.00 49.81 C
ATOM 8 O4' A A 557 -2.744 94.902 113.967 1.00 49.13 O
ATOM 9 C3' A A 557 -3.085 94.655 116.266 1.00 51.07 C
ATOM 10 O3' A A 557 -2.470 94.429 117.521 1.00 52.64 O
ATOM 11 C2' A A 557 -3.335 96.114 115.918 1.00 50.55 C
ATOM 12 O2' A A 557 -2.260 96.976 116.238 1.00 51.58 O
ATOM 13 C1' A A 557 -3.520 96.012 114.403 1.00 48.98 C
ATOM 14 N9 A A 557 -4.917 95.742 114.049 1.00 48.82 N
ATOM 15 C8 A A 557 -5.420 94.658 113.363 1.00 48.26 C
ATOM 16 N7 A A 557 -6.723 94.682 113.220 1.00 49.18 N
ATOM 17 C5 A A 557 -7.105 95.861 113.847 1.00 47.94 C
ATOM 18 C6 A A 557 -8.358 96.463 114.037 1.00 48.33 C
ATOM 19 N6 A A 557 -9.502 95.938 113.598 1.00 48.93 N
ATOM 20 N1 A A 557 -8.397 97.639 114.702 1.00 50.66 N
ATOM 21 C2 A A 557 -7.242 98.168 115.138 1.00 49.42 C
ATOM 22 N3 A A 557 -6.002 97.698 115.018 1.00 49.05 N
ATOM 23 C4 A A 557 -6.004 96.527 114.356 1.00 47.77 C
ATOM 24 P C A 558 -3.378 93.991 118.769 1.00 54.48 P
ATOM 25 OP1 C A 558 -2.462 93.448 119.814 1.00 54.90 O
ATOM 26 OP2 C A 558 -4.500 93.149 118.264 1.00 54.54 O
ATOM 27 O5' C A 558 -3.973 95.377 119.274 1.00 53.47 O
TER
ATOM 1 O3' G B 576 -7.789 88.654 106.706 1.00 56.14 O
ATOM 2 P U B 577 -8.109 89.703 105.527 1.00 57.19 P
ATOM 3 OP1 U B 577 -8.694 88.967 104.368 1.00 56.91 O
ATOM 4 OP2 U B 577 -6.906 90.552 105.324 1.00 58.00 O
ATOM 5 O5' U B 577 -9.234 90.633 106.166 1.00 56.44 O
ATOM 6 C5' U B 577 -10.572 90.137 106.414 1.00 55.25 C
ATOM 7 C4' U B 577 -11.166 90.832 107.615 1.00 54.77 C
ATOM 8 O4' U B 577 -10.571 90.320 108.839 1.00 54.78 O
ATOM 9 C3' U B 577 -10.904 92.326 107.656 1.00 55.28 C
ATOM 10 O3' U B 577 -11.839 93.040 106.849 1.00 56.89 O
ATOM 11 C2' U B 577 -11.001 92.644 109.144 1.00 55.28 C
ATOM 12 O2' U B 577 -12.330 92.777 109.590 1.00 56.40 O
ATOM 13 C1' U B 577 -10.397 91.382 109.772 1.00 54.86 C
ATOM 14 N1 U B 577 -8.968 91.470 110.139 1.00 54.37 N
ATOM 15 C2 U B 577 -8.573 92.466 111.030 1.00 54.07 C
ATOM 16 O2 U B 577 -9.344 93.289 111.501 1.00 53.84 O
ATOM 17 N3 U B 577 -7.234 92.465 111.346 1.00 54.60 N
ATOM 18 C4 U B 577 -6.260 91.602 110.872 1.00 54.32 C
ATOM 19 O4 U B 577 -5.087 91.756 111.226 1.00 53.54 O
ATOM 20 C5 U B 577 -6.736 90.612 109.954 1.00 53.37 C
ATOM 21 C6 U B 577 -8.035 90.581 109.624 1.00 55.05 C
ATOM 22 P A B 578 -11.397 94.419 106.150 1.00 58.05 P
ATOM 23 OP1 A B 578 -12.538 94.973 105.376 1.00 58.40 O
ATOM 24 OP2 A B 578 -10.090 94.199 105.472 1.00 59.22 O
ATOM 25 O5' A B 578 -11.144 95.384 107.385 1.00 56.96 O
TER
ATOM 2 P A A 557 -0.135 92.102 113.552 1.00 51.93 P
ATOM 3 OP1 A A 557 0.447 92.286 114.909 1.00 52.12 O
ATOM 4 OP2 A A 557 0.091 90.818 112.827 1.00 48.50 O
ATOM 5 O5' A A 557 -1.704 92.338 113.648 1.00 51.71 O
ATOM 6 C5' A A 557 -2.322 92.694 114.891 1.00 50.37 C
ATOM 7 C4' A A 557 -2.226 94.180 115.117 1.00 49.81 C
ATOM 8 O4' A A 557 -2.744 94.902 113.967 1.00 49.13 O
ATOM 9 C3' A A 557 -3.085 94.655 116.266 1.00 51.07 C
ATOM 10 O3' A A 557 -2.470 94.429 117.521 1.00 52.64 O
ATOM 11 C2' A A 557 -3.335 96.114 115.918 1.00 50.55 C
ATOM 12 O2' A A 557 -2.260 96.976 116.238 1.00 51.58 O
ATOM 13 C1' A A 557 -3.520 96.012 114.403 1.00 48.98 C
ATOM 14 N9 A A 557 -4.917 95.742 114.049 1.00 48.82 N
ATOM 15 C8 A A 557 -5.420 94.658 113.363 1.00 48.26 C
ATOM 16 N7 A A 557 -6.723 94.682 113.220 1.00 49.18 N
ATOM 17 C5 A A 557 -7.105 95.861 113.847 1.00 47.94 C
ATOM 18 C6 A A 557 -8.358 96.463 114.037 1.00 48.33 C
ATOM 19 N6 A A 557 -9.502 95.938 113.598 1.00 48.93 N
ATOM 20 N1 A A 557 -8.397 97.639 114.702 1.00 50.66 N
ATOM 21 C2 A A 557 -7.242 98.168 115.138 1.00 49.42 C
ATOM 22 N3 A A 557 -6.002 97.698 115.018 1.00 49.05 N
ATOM 23 C4 A A 557 -6.004 96.527 114.356 1.00 47.77 C
ATOM 24 P C A 558 -3.378 93.991 118.769 1.00 54.48 P
ATOM 25 OP1 C A 558 -2.462 93.448 119.814 1.00 54.90 O
ATOM 26 OP2 C A 558 -4.500 93.149 118.264 1.00 54.54 O
ATOM 27 O5' C A 558 -3.973 95.377 119.274 1.00 53.47 O
TER
ATOM 1 O3' G B 576 -7.789 88.654 106.706 1.00 56.14 O
ATOM 2 P U B 577 -8.109 89.703 105.527 1.00 57.19 P
ATOM 3 OP1 U B 577 -8.694 88.967 104.368 1.00 56.91 O
ATOM 4 OP2 U B 577 -6.906 90.552 105.324 1.00 58.00 O
ATOM 5 O5' U B 577 -9.234 90.633 106.166 1.00 56.44 O
ATOM 6 C5' U B 577 -10.572 90.137 106.414 1.00 55.25 C
ATOM 7 C4' U B 577 -11.166 90.832 107.615 1.00 54.77 C
ATOM 8 O4' U B 577 -10.571 90.320 108.839 1.00 54.78 O
ATOM 9 C3' U B 577 -10.904 92.326 107.656 1.00 55.28 C
ATOM 10 O3' U B 577 -11.839 93.040 106.849 1.00 56.89 O
ATOM 11 C2' U B 577 -11.001 92.644 109.144 1.00 55.28 C
ATOM 12 O2' U B 577 -12.330 92.777 109.590 1.00 56.40 O
ATOM 13 C1' U B 577 -10.397 91.382 109.772 1.00 54.86 C
ATOM 14 N1 U B 577 -8.968 91.470 110.139 1.00 54.37 N
ATOM 15 C2 U B 577 -8.573 92.466 111.030 1.00 54.07 C
ATOM 16 O2 U B 577 -9.344 93.289 111.501 1.00 53.84 O
ATOM 17 N3 U B 577 -7.234 92.465 111.346 1.00 54.60 N
ATOM 18 C4 U B 577 -6.260 91.602 110.872 1.00 54.32 C
ATOM 19 O4 U B 577 -5.087 91.756 111.226 1.00 53.54 O
ATOM 20 C5 U B 577 -6.736 90.612 109.954 1.00 53.37 C
ATOM 21 C6 U B 577 -8.035 90.581 109.624 1.00 55.05 C
ATOM 22 P A B 578 -11.397 94.419 106.150 1.00 58.05 P
ATOM 23 OP1 A B 578 -12.538 94.973 105.376 1.00 58.40 O
ATOM 24 OP2 A B 578 -10.090 94.199 105.472 1.00 59.22 O
ATOM 25 O5' A B 578 -11.144 95.384 107.385 1.00 56.96 O
TER
Atoms:
OP1: (0.447,92.286,114.909)
OP2: (0.091,90.818,112.827)
C3': (-3.085,94.655,116.266)
C1': (-3.520,96.012,114.403)
C5': (-2.322,92.694,114.891)
O4': (-2.744,94.902,113.967)
C8: (-5.420,94.658,113.363)
O2': (-2.260,96.976,116.238)
C6: (-8.358,96.463,114.037)
C5: (-7.105,95.861,113.847)
C4: (-6.004,96.527,114.356)
P: (-0.135,92.102,113.552)
C4': (-2.226,94.180,115.117)
C2': (-3.335,96.114,115.918)
C2: (-7.242,98.168,115.138)
N1: (-8.397,97.639,114.702)
N3: (-6.002,97.698,115.018)
N6: (-9.502,95.938,113.598)
N7: (-6.723,94.682,113.220)
N9: (-4.917,95.742,114.049)
O5': (-1.704,92.338,113.648)
O3': (-2.470,94.429,117.521)
OP2: (0.091,90.818,112.827)
C3': (-3.085,94.655,116.266)
C1': (-3.520,96.012,114.403)
C5': (-2.322,92.694,114.891)
O4': (-2.744,94.902,113.967)
C8: (-5.420,94.658,113.363)
O2': (-2.260,96.976,116.238)
C6: (-8.358,96.463,114.037)
C5: (-7.105,95.861,113.847)
C4: (-6.004,96.527,114.356)
P: (-0.135,92.102,113.552)
C4': (-2.226,94.180,115.117)
C2': (-3.335,96.114,115.918)
C2: (-7.242,98.168,115.138)
N1: (-8.397,97.639,114.702)
N3: (-6.002,97.698,115.018)
N6: (-9.502,95.938,113.598)
N7: (-6.723,94.682,113.220)
N9: (-4.917,95.742,114.049)
O5': (-1.704,92.338,113.648)
O3': (-2.470,94.429,117.521)
C4: (-6.260,91.602,110.872)
N3: (-7.234,92.465,111.346)
OP1: (-8.694,88.967,104.368)
OP2: (-6.906,90.552,105.324)
C2: (-8.573,92.466,111.030)
C1': (-10.397,91.382,109.772)
C3': (-10.904,92.326,107.656)
O5': (-9.234,90.633,106.166)
O4': (-10.571,90.320,108.839)
C5': (-10.572,90.137,106.414)
P: (-8.109,89.703,105.527)
C4': (-11.166,90.832,107.615)
C2': (-11.001,92.644,109.144)
O2': (-12.330,92.777,109.590)
N1: (-8.968,91.470,110.139)
O4: (-5.087,91.756,111.226)
O2: (-9.344,93.289,111.501)
C6: (-8.035,90.581,109.624)
C5: (-6.736,90.612,109.954)
O3': (-11.839,93.040,106.849)
N3: (-7.234,92.465,111.346)
OP1: (-8.694,88.967,104.368)
OP2: (-6.906,90.552,105.324)
C2: (-8.573,92.466,111.030)
C1': (-10.397,91.382,109.772)
C3': (-10.904,92.326,107.656)
O5': (-9.234,90.633,106.166)
O4': (-10.571,90.320,108.839)
C5': (-10.572,90.137,106.414)
P: (-8.109,89.703,105.527)
C4': (-11.166,90.832,107.615)
C2': (-11.001,92.644,109.144)
O2': (-12.330,92.777,109.590)
N1: (-8.968,91.470,110.139)
O4: (-5.087,91.756,111.226)
O2: (-9.344,93.289,111.501)
C6: (-8.035,90.581,109.624)
C5: (-6.736,90.612,109.954)
O3': (-11.839,93.040,106.849)
Image (generated by PyMOL):