ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QVG:02104:02088

Extra

PDB:
ATOM 1 O3' G A2103 121.309 111.792 41.415 1.00 97.95 O
ATOM 2 P A A2104 122.134 110.451 41.330 1.00 97.32 P
ATOM 3 OP1 A A2104 121.695 109.563 42.448 1.00 97.70 O
ATOM 4 OP2 A A2104 123.559 110.870 41.238 1.00 97.62 O
ATOM 5 O5' A A2104 121.669 109.851 39.924 1.00 95.55 O
ATOM 6 C5' A A2104 120.663 108.817 39.824 1.00 91.16 C
ATOM 7 C4' A A2104 119.312 109.424 39.553 1.00 87.52 C
ATOM 8 O4' A A2104 119.442 110.507 38.593 1.00 86.61 O
ATOM 9 C3' A A2104 118.296 108.460 38.969 1.00 85.92 C
ATOM 10 O3' A A2104 117.026 108.699 39.536 1.00 85.21 O
ATOM 11 C2' A A2104 118.267 108.856 37.503 1.00 85.38 C
ATOM 12 O2' A A2104 117.041 108.542 36.894 1.00 85.73 O
ATOM 13 C1' A A2104 118.462 110.366 37.592 1.00 85.61 C
ATOM 14 N9 A A2104 118.967 110.943 36.343 1.00 85.63 N
ATOM 15 C8 A A2104 120.261 111.250 36.009 1.00 85.94 C
ATOM 16 N7 A A2104 120.405 111.656 34.771 1.00 86.04 N
ATOM 17 C5 A A2104 119.118 111.642 34.263 1.00 85.53 C
ATOM 18 C6 A A2104 118.601 111.945 32.996 1.00 85.73 C
ATOM 19 N6 A A2104 119.356 112.299 31.955 1.00 86.43 N
ATOM 20 N1 A A2104 117.267 111.852 32.825 1.00 85.39 N
ATOM 21 C2 A A2104 116.518 111.453 33.853 1.00 84.32 C
ATOM 22 N3 A A2104 116.888 111.120 35.084 1.00 84.56 N
ATOM 23 C4 A A2104 118.217 111.237 35.228 1.00 85.32 C
ATOM 24 P C A2105 116.307 107.538 40.380 1.00 83.91 P
ATOM 25 OP1 C A2105 117.224 106.356 40.426 1.00 83.33 O
ATOM 26 OP2 C A2105 114.938 107.366 39.842 1.00 83.71 O
ATOM 27 O5' C A2105 116.194 108.189 41.829 1.00 81.74 O
TER

ATOM 1 O3' C B2087 130.050 113.428 33.327 1.00112.65 O
ATOM 2 P U B2088 129.387 114.900 33.281 1.00110.76 P
ATOM 3 OP1 U B2088 130.244 115.774 32.442 1.00110.16 O
ATOM 4 OP2 U B2088 129.070 115.311 34.677 1.00110.64 O
ATOM 5 O5' U B2088 128.045 114.692 32.455 1.00109.52 O
ATOM 6 C5' U B2088 128.084 114.230 31.104 1.00107.43 C
ATOM 7 C4' U B2088 126.689 114.163 30.541 1.00106.86 C
ATOM 8 O4' U B2088 125.928 113.157 31.263 1.00107.28 O
ATOM 9 C3' U B2088 125.874 115.451 30.616 1.00106.08 C
ATOM 10 O3' U B2088 125.065 115.556 29.455 1.00105.26 O
ATOM 11 C2' U B2088 125.006 115.244 31.855 1.00106.62 C
ATOM 12 O2' U B2088 123.761 115.915 31.824 1.00106.37 O
ATOM 13 C1' U B2088 124.751 113.742 31.804 1.00107.67 C
ATOM 14 N1 U B2088 124.487 113.173 33.140 1.00108.15 N
ATOM 15 C2 U B2088 123.175 112.874 33.471 1.00107.69 C
ATOM 16 O2 U B2088 122.240 113.050 32.708 1.00107.28 O
ATOM 17 N3 U B2088 123.002 112.357 34.730 1.00107.57 N
ATOM 18 C4 U B2088 123.977 112.106 35.671 1.00107.72 C
ATOM 19 O4 U B2088 123.661 111.624 36.757 1.00107.73 O
ATOM 20 C5 U B2088 125.301 112.436 35.259 1.00107.80 C
ATOM 21 C6 U B2088 125.508 112.945 34.043 1.00108.06 C
ATOM 22 P C B2089 124.702 117.006 28.867 1.00104.33 P
ATOM 23 OP1 C B2089 124.964 116.985 27.411 1.00105.11 O
ATOM 24 OP2 C B2089 125.347 118.040 29.713 1.00104.97 O
ATOM 25 O5' C B2089 123.132 117.107 29.071 1.00104.14 O
TER

Atoms:
OP1: (121.695,109.563,42.448)
OP2: (123.559,110.870,41.238)
C3': (118.296,108.460,38.969)
C1': (118.462,110.366,37.592)
C5': (120.663,108.817,39.824)
O4': (119.442,110.507,38.593)
C8: (120.261,111.250,36.009)
O2': (117.041,108.542,36.894)
C6: (118.601,111.945,32.996)
C5: (119.118,111.642,34.263)
C4: (118.217,111.237,35.228)
P: (122.134,110.451,41.330)
C4': (119.312,109.424,39.553)
C2': (118.267,108.856,37.503)
C2: (116.518,111.453,33.853)
N1: (117.267,111.852,32.825)
N3: (116.888,111.120,35.084)
N6: (119.356,112.299,31.955)
N7: (120.405,111.656,34.771)
N9: (118.967,110.943,36.343)
O5': (121.669,109.851,39.924)
O3': (117.026,108.699,39.536)
C4: (123.977,112.106,35.671)
N3: (123.002,112.357,34.730)
OP1: (130.244,115.774,32.442)
OP2: (129.070,115.311,34.677)
C2: (123.175,112.874,33.471)
C1': (124.751,113.742,31.804)
C3': (125.874,115.451,30.616)
O5': (128.045,114.692,32.455)
O4': (125.928,113.157,31.263)
C5': (128.084,114.230,31.104)
P: (129.387,114.900,33.281)
C4': (126.689,114.163,30.541)
C2': (125.006,115.244,31.855)
O2': (123.761,115.915,31.824)
N1: (124.487,113.173,33.140)
O4: (123.661,111.624,36.757)
O2: (122.240,113.050,32.708)
C6: (125.508,112.945,34.043)
C5: (125.301,112.436,35.259)
O3': (125.065,115.556,29.455)
Image (generated by PyMOL):
PyMOL image
show in jmol