Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A473:A474
Extra
PDB:
ATOM 1 O3' G A 472 46.705 -68.220 -42.519 1.00 39.08 O
ATOM 2 P U A 473 46.052 -67.027 -41.642 1.00 48.19 P
ATOM 3 OP1 U A 473 45.201 -66.150 -42.515 1.00 39.51 O
ATOM 4 OP2 U A 473 47.131 -66.415 -40.819 1.00 45.89 O
ATOM 5 O5' U A 473 45.095 -67.793 -40.617 1.00 48.51 O
ATOM 6 C5' U A 473 43.869 -68.373 -41.056 1.00 43.95 C
ATOM 7 C4' U A 473 43.679 -69.732 -40.447 1.00 42.66 C
ATOM 8 O4' U A 473 44.594 -70.659 -41.074 1.00 47.59 O
ATOM 9 C3' U A 473 43.982 -69.823 -38.969 1.00 43.46 C
ATOM 10 O3' U A 473 42.866 -69.388 -38.214 1.00 46.13 O
ATOM 11 C2' U A 473 44.356 -71.288 -38.784 1.00 44.83 C
ATOM 12 O2' U A 473 43.272 -72.166 -38.680 1.00 41.30 O
ATOM 13 C1' U A 473 45.050 -71.591 -40.112 1.00 44.65 C
ATOM 14 N1 U A 473 46.520 -71.525 -40.035 1.00 47.19 N
ATOM 15 C2 U A 473 47.159 -72.278 -39.054 1.00 46.80 C
ATOM 16 O2 U A 473 46.554 -72.985 -38.259 1.00 52.82 O
ATOM 17 N3 U A 473 48.525 -72.176 -39.037 1.00 47.29 N
ATOM 18 C4 U A 473 49.307 -71.414 -39.871 1.00 51.61 C
ATOM 19 O4 U A 473 50.525 -71.363 -39.682 1.00 54.43 O
ATOM 20 C5 U A 473 48.581 -70.671 -40.856 1.00 48.62 C
ATOM 21 C6 U A 473 47.247 -70.746 -40.901 1.00 50.34 C
ATOM 22 P A A 474 43.079 -68.291 -37.070 1.00 42.28 P
ATOM 23 OP1 A A 474 41.744 -67.693 -36.830 1.00 49.18 O
ATOM 24 OP2 A A 474 44.215 -67.444 -37.489 1.00 35.53 O
ATOM 25 O5' A A 474 43.508 -69.127 -35.783 1.00 38.29 O
TER
ATOM 1 O3' U B 473 42.866 -69.388 -38.214 1.00 46.13 O
ATOM 2 P A B 474 43.079 -68.291 -37.070 1.00 42.28 P
ATOM 3 OP1 A B 474 41.744 -67.693 -36.830 1.00 49.18 O
ATOM 4 OP2 A B 474 44.215 -67.444 -37.489 1.00 35.53 O
ATOM 5 O5' A B 474 43.508 -69.127 -35.783 1.00 38.29 O
ATOM 6 C5' A B 474 42.665 -70.173 -35.311 1.00 42.76 C
ATOM 7 C4' A B 474 43.441 -71.183 -34.477 1.00 45.50 C
ATOM 8 O4' A B 474 44.429 -71.924 -35.253 1.00 43.10 O
ATOM 9 C3' A B 474 44.195 -70.629 -33.288 1.00 44.71 C
ATOM 10 O3' A B 474 43.302 -70.402 -32.204 1.00 44.30 O
ATOM 11 C2' A B 474 45.198 -71.746 -33.012 1.00 45.17 C
ATOM 12 O2' A B 474 44.618 -72.826 -32.311 1.00 50.69 O
ATOM 13 C1' A B 474 45.548 -72.221 -34.427 1.00 45.08 C
ATOM 14 N9 A B 474 46.719 -71.533 -34.992 1.00 46.65 N
ATOM 15 C8 A B 474 46.806 -71.019 -36.262 1.00 46.92 C
ATOM 16 N7 A B 474 47.942 -70.417 -36.521 1.00 48.93 N
ATOM 17 C5 A B 474 48.659 -70.541 -35.339 1.00 54.72 C
ATOM 18 C6 A B 474 49.925 -70.074 -34.961 1.00 58.07 C
ATOM 19 N6 A B 474 50.704 -69.342 -35.757 1.00 63.19 N
ATOM 20 N1 A B 474 50.363 -70.371 -33.720 1.00 52.63 N
ATOM 21 C2 A B 474 49.567 -71.068 -32.914 1.00 53.98 C
ATOM 22 N3 A B 474 48.342 -71.545 -33.143 1.00 57.82 N
ATOM 23 C4 A B 474 47.934 -71.244 -34.392 1.00 54.16 C
ATOM 24 P C B 475 42.813 -68.909 -31.874 1.00 55.70 P
ATOM 25 OP1 C B 475 41.807 -69.019 -30.793 1.00 42.92 O
ATOM 26 OP2 C B 475 42.436 -68.284 -33.167 1.00 40.98 O
ATOM 27 O5' C B 475 44.100 -68.229 -31.234 1.00 44.89 O
TER
ATOM 2 P U A 473 46.052 -67.027 -41.642 1.00 48.19 P
ATOM 3 OP1 U A 473 45.201 -66.150 -42.515 1.00 39.51 O
ATOM 4 OP2 U A 473 47.131 -66.415 -40.819 1.00 45.89 O
ATOM 5 O5' U A 473 45.095 -67.793 -40.617 1.00 48.51 O
ATOM 6 C5' U A 473 43.869 -68.373 -41.056 1.00 43.95 C
ATOM 7 C4' U A 473 43.679 -69.732 -40.447 1.00 42.66 C
ATOM 8 O4' U A 473 44.594 -70.659 -41.074 1.00 47.59 O
ATOM 9 C3' U A 473 43.982 -69.823 -38.969 1.00 43.46 C
ATOM 10 O3' U A 473 42.866 -69.388 -38.214 1.00 46.13 O
ATOM 11 C2' U A 473 44.356 -71.288 -38.784 1.00 44.83 C
ATOM 12 O2' U A 473 43.272 -72.166 -38.680 1.00 41.30 O
ATOM 13 C1' U A 473 45.050 -71.591 -40.112 1.00 44.65 C
ATOM 14 N1 U A 473 46.520 -71.525 -40.035 1.00 47.19 N
ATOM 15 C2 U A 473 47.159 -72.278 -39.054 1.00 46.80 C
ATOM 16 O2 U A 473 46.554 -72.985 -38.259 1.00 52.82 O
ATOM 17 N3 U A 473 48.525 -72.176 -39.037 1.00 47.29 N
ATOM 18 C4 U A 473 49.307 -71.414 -39.871 1.00 51.61 C
ATOM 19 O4 U A 473 50.525 -71.363 -39.682 1.00 54.43 O
ATOM 20 C5 U A 473 48.581 -70.671 -40.856 1.00 48.62 C
ATOM 21 C6 U A 473 47.247 -70.746 -40.901 1.00 50.34 C
ATOM 22 P A A 474 43.079 -68.291 -37.070 1.00 42.28 P
ATOM 23 OP1 A A 474 41.744 -67.693 -36.830 1.00 49.18 O
ATOM 24 OP2 A A 474 44.215 -67.444 -37.489 1.00 35.53 O
ATOM 25 O5' A A 474 43.508 -69.127 -35.783 1.00 38.29 O
TER
ATOM 1 O3' U B 473 42.866 -69.388 -38.214 1.00 46.13 O
ATOM 2 P A B 474 43.079 -68.291 -37.070 1.00 42.28 P
ATOM 3 OP1 A B 474 41.744 -67.693 -36.830 1.00 49.18 O
ATOM 4 OP2 A B 474 44.215 -67.444 -37.489 1.00 35.53 O
ATOM 5 O5' A B 474 43.508 -69.127 -35.783 1.00 38.29 O
ATOM 6 C5' A B 474 42.665 -70.173 -35.311 1.00 42.76 C
ATOM 7 C4' A B 474 43.441 -71.183 -34.477 1.00 45.50 C
ATOM 8 O4' A B 474 44.429 -71.924 -35.253 1.00 43.10 O
ATOM 9 C3' A B 474 44.195 -70.629 -33.288 1.00 44.71 C
ATOM 10 O3' A B 474 43.302 -70.402 -32.204 1.00 44.30 O
ATOM 11 C2' A B 474 45.198 -71.746 -33.012 1.00 45.17 C
ATOM 12 O2' A B 474 44.618 -72.826 -32.311 1.00 50.69 O
ATOM 13 C1' A B 474 45.548 -72.221 -34.427 1.00 45.08 C
ATOM 14 N9 A B 474 46.719 -71.533 -34.992 1.00 46.65 N
ATOM 15 C8 A B 474 46.806 -71.019 -36.262 1.00 46.92 C
ATOM 16 N7 A B 474 47.942 -70.417 -36.521 1.00 48.93 N
ATOM 17 C5 A B 474 48.659 -70.541 -35.339 1.00 54.72 C
ATOM 18 C6 A B 474 49.925 -70.074 -34.961 1.00 58.07 C
ATOM 19 N6 A B 474 50.704 -69.342 -35.757 1.00 63.19 N
ATOM 20 N1 A B 474 50.363 -70.371 -33.720 1.00 52.63 N
ATOM 21 C2 A B 474 49.567 -71.068 -32.914 1.00 53.98 C
ATOM 22 N3 A B 474 48.342 -71.545 -33.143 1.00 57.82 N
ATOM 23 C4 A B 474 47.934 -71.244 -34.392 1.00 54.16 C
ATOM 24 P C B 475 42.813 -68.909 -31.874 1.00 55.70 P
ATOM 25 OP1 C B 475 41.807 -69.019 -30.793 1.00 42.92 O
ATOM 26 OP2 C B 475 42.436 -68.284 -33.167 1.00 40.98 O
ATOM 27 O5' C B 475 44.100 -68.229 -31.234 1.00 44.89 O
TER
Atoms:
C4: (49.307,-71.414,-39.871)
N3: (48.525,-72.176,-39.037)
OP1: (45.201,-66.150,-42.515)
OP2: (47.131,-66.415,-40.819)
C2: (47.159,-72.278,-39.054)
C1': (45.050,-71.591,-40.112)
C3': (43.982,-69.823,-38.969)
O5': (45.095,-67.793,-40.617)
O4': (44.594,-70.659,-41.074)
C5': (43.869,-68.373,-41.056)
P: (46.052,-67.027,-41.642)
C4': (43.679,-69.732,-40.447)
C2': (44.356,-71.288,-38.784)
O2': (43.272,-72.166,-38.680)
N1: (46.520,-71.525,-40.035)
O4: (50.525,-71.363,-39.682)
O2: (46.554,-72.985,-38.259)
C6: (47.247,-70.746,-40.901)
C5: (48.581,-70.671,-40.856)
O3': (42.866,-69.388,-38.214)
N3: (48.525,-72.176,-39.037)
OP1: (45.201,-66.150,-42.515)
OP2: (47.131,-66.415,-40.819)
C2: (47.159,-72.278,-39.054)
C1': (45.050,-71.591,-40.112)
C3': (43.982,-69.823,-38.969)
O5': (45.095,-67.793,-40.617)
O4': (44.594,-70.659,-41.074)
C5': (43.869,-68.373,-41.056)
P: (46.052,-67.027,-41.642)
C4': (43.679,-69.732,-40.447)
C2': (44.356,-71.288,-38.784)
O2': (43.272,-72.166,-38.680)
N1: (46.520,-71.525,-40.035)
O4: (50.525,-71.363,-39.682)
O2: (46.554,-72.985,-38.259)
C6: (47.247,-70.746,-40.901)
C5: (48.581,-70.671,-40.856)
O3': (42.866,-69.388,-38.214)
OP1: (41.744,-67.693,-36.830)
OP2: (44.215,-67.444,-37.489)
C3': (44.195,-70.629,-33.288)
C1': (45.548,-72.221,-34.427)
C5': (42.665,-70.173,-35.311)
O4': (44.429,-71.924,-35.253)
C8: (46.806,-71.019,-36.262)
O2': (44.618,-72.826,-32.311)
C6: (49.925,-70.074,-34.961)
C5: (48.659,-70.541,-35.339)
C4: (47.934,-71.244,-34.392)
P: (43.079,-68.291,-37.070)
C4': (43.441,-71.183,-34.477)
C2': (45.198,-71.746,-33.012)
C2: (49.567,-71.068,-32.914)
N1: (50.363,-70.371,-33.720)
N3: (48.342,-71.545,-33.143)
N6: (50.704,-69.342,-35.757)
N7: (47.942,-70.417,-36.521)
N9: (46.719,-71.533,-34.992)
O5': (43.508,-69.127,-35.783)
O3': (43.302,-70.402,-32.204)
OP2: (44.215,-67.444,-37.489)
C3': (44.195,-70.629,-33.288)
C1': (45.548,-72.221,-34.427)
C5': (42.665,-70.173,-35.311)
O4': (44.429,-71.924,-35.253)
C8: (46.806,-71.019,-36.262)
O2': (44.618,-72.826,-32.311)
C6: (49.925,-70.074,-34.961)
C5: (48.659,-70.541,-35.339)
C4: (47.934,-71.244,-34.392)
P: (43.079,-68.291,-37.070)
C4': (43.441,-71.183,-34.477)
C2': (45.198,-71.746,-33.012)
C2: (49.567,-71.068,-32.914)
N1: (50.363,-70.371,-33.720)
N3: (48.342,-71.545,-33.143)
N6: (50.704,-69.342,-35.757)
N7: (47.942,-70.417,-36.521)
N9: (46.719,-71.533,-34.992)
O5': (43.508,-69.127,-35.783)
O3': (43.302,-70.402,-32.204)
Image (generated by PyMOL):