ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A811:A812

Extra

PDB:
ATOM 1 O3' G A 810 -58.978 20.516 -8.631 1.00 5.25 O
ATOM 2 P U A 811 -59.202 21.122 -10.097 1.00 1.96 P
ATOM 3 OP1 U A 811 -58.884 20.051 -11.076 1.00 1.96 O
ATOM 4 OP2 U A 811 -58.437 22.403 -10.167 1.00 1.96 O
ATOM 5 O5' U A 811 -60.769 21.439 -10.099 1.00 1.96 O
ATOM 6 C5' U A 811 -61.716 20.402 -10.204 1.00 1.96 C
ATOM 7 C4' U A 811 -62.521 20.279 -8.954 1.00 1.96 C
ATOM 8 O4' U A 811 -61.664 20.352 -7.812 1.00 1.96 O
ATOM 9 C3' U A 811 -63.525 21.371 -8.710 1.00 1.96 C
ATOM 10 O3' U A 811 -64.713 21.158 -9.416 1.00 1.96 O
ATOM 11 C2' U A 811 -63.720 21.359 -7.192 1.00 1.96 C
ATOM 12 O2' U A 811 -64.828 20.551 -6.814 1.00 1.96 O
ATOM 13 C1' U A 811 -62.431 20.706 -6.695 1.00 1.96 C
ATOM 14 N1 U A 811 -61.650 21.584 -5.827 1.00 1.77 N
ATOM 15 C2 U A 811 -62.304 22.018 -4.693 1.00 1.77 C
ATOM 16 O2 U A 811 -63.469 21.731 -4.438 1.00 1.77 O
ATOM 17 N3 U A 811 -61.556 22.810 -3.875 1.00 1.77 N
ATOM 18 C4 U A 811 -60.244 23.166 -4.086 1.00 1.77 C
ATOM 19 O4 U A 811 -59.694 23.896 -3.261 1.00 1.77 O
ATOM 20 C5 U A 811 -59.638 22.663 -5.283 1.00 1.77 C
ATOM 21 C6 U A 811 -60.355 21.897 -6.093 1.00 1.77 C
ATOM 22 P A A 812 -65.506 22.402 -9.977 1.00 0.08 P
ATOM 23 OP1 A A 812 -66.548 21.888 -10.876 1.00 0.08 O
ATOM 24 OP2 A A 812 -64.493 23.316 -10.511 1.00 0.08 O
ATOM 25 O5' A A 812 -66.162 23.036 -8.668 1.00 0.08 O
TER

ATOM 1 O3' U B 811 -64.713 21.158 -9.416 1.00 1.96 O
ATOM 2 P A B 812 -65.506 22.402 -9.977 1.00 0.08 P
ATOM 3 OP1 A B 812 -66.548 21.888 -10.876 1.00 0.08 O
ATOM 4 OP2 A B 812 -64.493 23.316 -10.511 1.00 0.08 O
ATOM 5 O5' A B 812 -66.162 23.036 -8.668 1.00 0.08 O
ATOM 6 C5' A B 812 -66.172 24.449 -8.480 1.00 0.08 C
ATOM 7 C4' A B 812 -67.008 24.851 -7.293 1.00 0.08 C
ATOM 8 O4' A B 812 -66.360 24.412 -6.071 1.00 0.08 O
ATOM 9 C3' A B 812 -67.191 26.337 -7.077 1.00 0.08 C
ATOM 10 O3' A B 812 -68.171 26.902 -7.908 1.00 0.08 O
ATOM 11 C2' A B 812 -67.540 26.399 -5.604 1.00 0.08 C
ATOM 12 O2' A B 812 -68.868 25.953 -5.391 1.00 0.08 O
ATOM 13 C1' A B 812 -66.593 25.349 -5.040 1.00 0.08 C
ATOM 14 N9 A B 812 -65.293 25.922 -4.626 1.00 0.09 N
ATOM 15 C8 A B 812 -64.083 25.650 -5.213 1.00 0.09 C
ATOM 16 N7 A B 812 -63.082 26.277 -4.661 1.00 0.09 N
ATOM 17 C5 A B 812 -63.668 27.001 -3.647 1.00 0.09 C
ATOM 18 C6 A B 812 -63.106 27.857 -2.700 1.00 0.09 C
ATOM 19 N6 A B 812 -61.796 28.082 -2.698 1.00 0.09 N
ATOM 20 N1 A B 812 -63.890 28.467 -1.791 1.00 0.09 N
ATOM 21 C2 A B 812 -65.187 28.179 -1.875 1.00 0.09 C
ATOM 22 N3 A B 812 -65.838 27.367 -2.722 1.00 0.09 N
ATOM 23 C4 A B 812 -65.014 26.796 -3.601 1.00 0.09 C
ATOM 24 P A B 813 -67.873 27.148 -9.459 1.00 0.01 P
ATOM 25 OP1 A B 813 -68.354 25.956 -10.168 1.00 0.01 O
ATOM 26 OP2 A B 813 -66.455 27.550 -9.600 1.00 0.01 O
ATOM 27 O5' A B 813 -68.800 28.352 -9.805 1.00 0.01 O
TER

Atoms:
C4: (-60.244,23.166,-4.086)
N3: (-61.556,22.810,-3.875)
OP1: (-58.884,20.051,-11.076)
OP2: (-58.437,22.403,-10.167)
C2: (-62.304,22.018,-4.693)
C1': (-62.431,20.706,-6.695)
C3': (-63.525,21.371,-8.710)
O5': (-60.769,21.439,-10.099)
O4': (-61.664,20.352,-7.812)
C5': (-61.716,20.402,-10.204)
P: (-59.202,21.122,-10.097)
C4': (-62.521,20.279,-8.954)
C2': (-63.720,21.359,-7.192)
O2': (-64.828,20.551,-6.814)
N1: (-61.650,21.584,-5.827)
O4: (-59.694,23.896,-3.261)
O2: (-63.469,21.731,-4.438)
C6: (-60.355,21.897,-6.093)
C5: (-59.638,22.663,-5.283)
O3': (-64.713,21.158,-9.416)
OP1: (-66.548,21.888,-10.876)
OP2: (-64.493,23.316,-10.511)
C3': (-67.191,26.337,-7.077)
C1': (-66.593,25.349,-5.040)
C5': (-66.172,24.449,-8.480)
O4': (-66.360,24.412,-6.071)
C8: (-64.083,25.650,-5.213)
O2': (-68.868,25.953,-5.391)
C6: (-63.106,27.857,-2.700)
C5: (-63.668,27.001,-3.647)
C4: (-65.014,26.796,-3.601)
P: (-65.506,22.402,-9.977)
C4': (-67.008,24.851,-7.293)
C2': (-67.540,26.399,-5.604)
C2: (-65.187,28.179,-1.875)
N1: (-63.890,28.467,-1.791)
N3: (-65.838,27.367,-2.722)
N6: (-61.796,28.082,-2.698)
N7: (-63.082,26.277,-4.661)
N9: (-65.293,25.922,-4.626)
O5': (-66.162,23.036,-8.668)
O3': (-68.171,26.902,-7.908)
Image (generated by PyMOL):
PyMOL image
show in jmol