ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:B43:B38

Extra

PDB:
ATOM 1 O3' G A 42 84.474 17.192 96.745 1.00 82.38 O
ATOM 2 P A A 43 84.504 16.811 98.303 1.00 82.31 P
ATOM 3 OP1 A A 43 85.904 16.446 98.661 1.00 82.24 O
ATOM 4 OP2 A A 43 83.405 15.841 98.565 1.00 81.80 O
ATOM 5 O5' A A 43 84.144 18.204 98.993 1.00 81.70 O
ATOM 6 C5' A A 43 83.724 18.278 100.368 1.00 79.69 C
ATOM 7 C4' A A 43 83.324 19.695 100.707 1.00 78.25 C
ATOM 8 O4' A A 43 84.497 20.545 100.616 1.00 78.23 O
ATOM 9 C3' A A 43 82.317 20.351 99.772 1.00 77.36 C
ATOM 10 O3' A A 43 80.976 20.001 100.092 1.00 76.45 O
ATOM 11 C2' A A 43 82.616 21.832 99.972 1.00 77.31 C
ATOM 12 O2' A A 43 82.078 22.384 101.162 1.00 76.87 O
ATOM 13 C1' A A 43 84.142 21.800 100.056 1.00 77.45 C
ATOM 14 N9 A A 43 84.724 21.880 98.716 1.00 76.50 N
ATOM 15 C8 A A 43 85.193 20.867 97.908 1.00 75.37 C
ATOM 16 N7 A A 43 85.614 21.280 96.738 1.00 74.70 N
ATOM 17 C5 A A 43 85.418 22.654 96.781 1.00 75.40 C
ATOM 18 C6 A A 43 85.659 23.669 95.849 1.00 75.45 C
ATOM 19 N6 A A 43 86.181 23.453 94.642 1.00 74.73 N
ATOM 20 N1 A A 43 85.343 24.935 96.202 1.00 75.88 N
ATOM 21 C2 A A 43 84.829 25.155 97.419 1.00 75.78 C
ATOM 22 N3 A A 43 84.562 24.285 98.384 1.00 75.32 N
ATOM 23 C4 A A 43 84.879 23.037 97.996 1.00 75.91 C
ATOM 24 P A A 44 79.940 19.611 98.911 1.00 75.77 P
ATOM 25 OP1 A A 44 78.656 19.292 99.586 1.00 75.66 O
ATOM 26 OP2 A A 44 80.539 18.637 97.951 1.00 74.30 O
ATOM 27 O5' A A 44 79.725 20.963 98.100 1.00 76.68 O
TER

ATOM 1 O3' A B 37 85.702 25.046 87.536 1.00 80.29 O
ATOM 2 P U B 38 87.196 25.532 87.215 1.00 81.92 P
ATOM 3 OP1 U B 38 87.095 26.774 86.385 1.00 81.09 O
ATOM 4 OP2 U B 38 87.960 24.360 86.689 1.00 81.65 O
ATOM 5 O5' U B 38 87.745 25.926 88.664 1.00 82.02 O
ATOM 6 C5' U B 38 86.909 26.674 89.581 1.00 83.91 C
ATOM 7 C4' U B 38 87.160 26.255 91.011 1.00 85.30 C
ATOM 8 O4' U B 38 87.018 24.820 91.121 1.00 85.65 O
ATOM 9 C3' U B 38 88.513 26.605 91.623 1.00 86.08 C
ATOM 10 O3' U B 38 88.351 27.972 92.088 1.00 86.86 O
ATOM 11 C2' U B 38 88.683 25.519 92.703 1.00 86.52 C
ATOM 12 O2' U B 38 88.093 25.818 93.950 1.00 88.26 O
ATOM 13 C1' U B 38 87.872 24.341 92.134 1.00 86.12 C
ATOM 14 N1 U B 38 88.522 23.104 91.660 1.00 86.05 N
ATOM 15 C2 U B 38 88.859 22.122 92.598 1.00 86.38 C
ATOM 16 O2 U B 38 88.698 22.257 93.804 1.00 87.35 O
ATOM 17 N3 U B 38 89.391 20.971 92.067 1.00 85.90 N
ATOM 18 C4 U B 38 89.621 20.699 90.737 1.00 85.53 C
ATOM 19 O4 U B 38 90.026 19.583 90.409 1.00 85.28 O
ATOM 20 C5 U B 38 89.277 21.762 89.843 1.00 85.01 C
ATOM 21 C6 U B 38 88.760 22.899 90.321 1.00 85.42 C
ATOM 22 P C B 39 89.452 28.710 93.021 1.00 88.08 P
ATOM 23 OP1 C B 39 89.774 27.861 94.186 1.00 89.39 O
ATOM 24 OP2 C B 39 88.943 30.088 93.249 1.00 88.36 O
ATOM 25 O5' C B 39 90.766 28.836 92.136 1.00 88.32 O
TER

Atoms:
OP1: (85.904,16.446,98.661)
OP2: (83.405,15.841,98.565)
C3': (82.317,20.351,99.772)
C1': (84.142,21.800,100.056)
C5': (83.724,18.278,100.368)
O4': (84.497,20.545,100.616)
C8: (85.193,20.867,97.908)
O2': (82.078,22.384,101.162)
C6: (85.659,23.669,95.849)
C5: (85.418,22.654,96.781)
C4: (84.879,23.037,97.996)
P: (84.504,16.811,98.303)
C4': (83.324,19.695,100.707)
C2': (82.616,21.832,99.972)
C2: (84.829,25.155,97.419)
N1: (85.343,24.935,96.202)
N3: (84.562,24.285,98.384)
N6: (86.181,23.453,94.642)
N7: (85.614,21.280,96.738)
N9: (84.724,21.880,98.716)
O5': (84.144,18.204,98.993)
O3': (80.976,20.001,100.092)
C4: (89.621,20.699,90.737)
N3: (89.391,20.971,92.067)
OP1: (87.095,26.774,86.385)
OP2: (87.960,24.360,86.689)
C2: (88.859,22.122,92.598)
C1': (87.872,24.341,92.134)
C3': (88.513,26.605,91.623)
O5': (87.745,25.926,88.664)
O4': (87.018,24.820,91.121)
C5': (86.909,26.674,89.581)
P: (87.196,25.532,87.215)
C4': (87.160,26.255,91.011)
C2': (88.683,25.519,92.703)
O2': (88.093,25.818,93.950)
N1: (88.522,23.104,91.660)
O4: (90.026,19.583,90.409)
O2: (88.698,22.257,93.804)
C6: (88.760,22.899,90.321)
C5: (89.277,21.762,89.843)
O3': (88.351,27.972,92.088)
Image (generated by PyMOL):
PyMOL image
show in jmol