ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CC4:0557:0577

Extra

PDB:
ATOM 1 O3' G A 556 0.273 93.963 112.279 1.00 49.43 O
ATOM 2 P A A 557 -0.235 92.764 113.226 1.00 51.57 P
ATOM 3 OP1 A A 557 0.364 93.004 114.566 1.00 51.49 O
ATOM 4 OP2 A A 557 -0.042 91.446 112.563 1.00 47.84 O
ATOM 5 O5' A A 557 -1.803 93.018 113.316 1.00 52.84 O
ATOM 6 C5' A A 557 -2.423 93.359 114.560 1.00 52.34 C
ATOM 7 C4' A A 557 -2.242 94.825 114.838 1.00 51.27 C
ATOM 8 O4' A A 557 -2.676 95.602 113.695 1.00 49.87 O
ATOM 9 C3' A A 557 -3.071 95.324 115.999 1.00 53.06 C
ATOM 10 O3' A A 557 -2.424 95.094 117.235 1.00 56.31 O
ATOM 11 C2' A A 557 -3.305 96.785 115.642 1.00 51.93 C
ATOM 12 O2' A A 557 -2.224 97.644 115.940 1.00 50.73 O
ATOM 13 C1' A A 557 -3.498 96.673 114.128 1.00 50.04 C
ATOM 14 N9 A A 557 -4.878 96.331 113.785 1.00 48.96 N
ATOM 15 C8 A A 557 -5.331 95.198 113.148 1.00 49.04 C
ATOM 16 N7 A A 557 -6.633 95.160 113.001 1.00 48.74 N
ATOM 17 C5 A A 557 -7.066 96.348 113.570 1.00 46.85 C
ATOM 18 C6 A A 557 -8.337 96.900 113.726 1.00 46.75 C
ATOM 19 N6 A A 557 -9.454 96.304 113.305 1.00 45.64 N
ATOM 20 N1 A A 557 -8.428 98.104 114.336 1.00 47.58 N
ATOM 21 C2 A A 557 -7.302 98.700 114.754 1.00 45.43 C
ATOM 22 N3 A A 557 -6.048 98.279 114.662 1.00 46.06 N
ATOM 23 C4 A A 557 -5.997 97.082 114.053 1.00 47.21 C
ATOM 24 P C A 558 -3.304 94.757 118.532 1.00 58.95 P
ATOM 25 OP1 C A 558 -2.369 94.399 119.632 1.00 59.83 O
ATOM 26 OP2 C A 558 -4.367 93.798 118.135 1.00 58.11 O
ATOM 27 O5' C A 558 -3.958 96.163 118.888 1.00 58.00 O
TER

ATOM 1 O3' G B 576 -7.998 89.277 106.514 1.00 63.73 O
ATOM 2 P U B 577 -8.323 90.270 105.287 1.00 64.25 P
ATOM 3 OP1 U B 577 -8.889 89.485 104.156 1.00 62.59 O
ATOM 4 OP2 U B 577 -7.135 91.132 105.060 1.00 65.40 O
ATOM 5 O5' U B 577 -9.457 91.221 105.880 1.00 63.68 O
ATOM 6 C5' U B 577 -10.717 90.691 106.357 1.00 60.67 C
ATOM 7 C4' U B 577 -11.194 91.481 107.555 1.00 58.58 C
ATOM 8 O4' U B 577 -10.503 91.049 108.754 1.00 57.90 O
ATOM 9 C3' U B 577 -10.914 92.970 107.483 1.00 58.64 C
ATOM 10 O3' U B 577 -11.862 93.658 106.675 1.00 59.16 O
ATOM 11 C2' U B 577 -10.932 93.390 108.949 1.00 57.84 C
ATOM 12 O2' U B 577 -12.226 93.630 109.458 1.00 58.12 O
ATOM 13 C1' U B 577 -10.332 92.157 109.632 1.00 57.28 C
ATOM 14 N1 U B 577 -8.908 92.262 110.011 1.00 56.55 N
ATOM 15 C2 U B 577 -8.544 93.239 110.942 1.00 56.15 C
ATOM 16 O2 U B 577 -9.339 94.024 111.439 1.00 54.99 O
ATOM 17 N3 U B 577 -7.210 93.260 111.268 1.00 55.36 N
ATOM 18 C4 U B 577 -6.216 92.436 110.778 1.00 56.12 C
ATOM 19 O4 U B 577 -5.058 92.584 111.177 1.00 56.15 O
ATOM 20 C5 U B 577 -6.659 91.464 109.822 1.00 55.56 C
ATOM 21 C6 U B 577 -7.954 91.413 109.477 1.00 56.29 C
ATOM 22 P A B 578 -11.425 95.004 105.920 1.00 61.46 P
ATOM 23 OP1 A B 578 -12.564 95.504 105.114 1.00 62.91 O
ATOM 24 OP2 A B 578 -10.118 94.751 105.257 1.00 63.03 O
ATOM 25 O5' A B 578 -11.180 96.030 107.108 1.00 59.26 O
TER

Atoms:
OP1: (0.364,93.004,114.566)
OP2: (-0.042,91.446,112.563)
C3': (-3.071,95.324,115.999)
C1': (-3.498,96.673,114.128)
C5': (-2.423,93.359,114.560)
O4': (-2.676,95.602,113.695)
C8: (-5.331,95.198,113.148)
O2': (-2.224,97.644,115.940)
C6: (-8.337,96.900,113.726)
C5: (-7.066,96.348,113.570)
C4: (-5.997,97.082,114.053)
P: (-0.235,92.764,113.226)
C4': (-2.242,94.825,114.838)
C2': (-3.305,96.785,115.642)
C2: (-7.302,98.700,114.754)
N1: (-8.428,98.104,114.336)
N3: (-6.048,98.279,114.662)
N6: (-9.454,96.304,113.305)
N7: (-6.633,95.160,113.001)
N9: (-4.878,96.331,113.785)
O5': (-1.803,93.018,113.316)
O3': (-2.424,95.094,117.235)
C4: (-6.216,92.436,110.778)
N3: (-7.210,93.260,111.268)
OP1: (-8.889,89.485,104.156)
OP2: (-7.135,91.132,105.060)
C2: (-8.544,93.239,110.942)
C1': (-10.332,92.157,109.632)
C3': (-10.914,92.970,107.483)
O5': (-9.457,91.221,105.880)
O4': (-10.503,91.049,108.754)
C5': (-10.717,90.691,106.357)
P: (-8.323,90.270,105.287)
C4': (-11.194,91.481,107.555)
C2': (-10.932,93.390,108.949)
O2': (-12.226,93.630,109.458)
N1: (-8.908,92.262,110.011)
O4: (-5.058,92.584,111.177)
O2: (-9.339,94.024,111.439)
C6: (-7.954,91.413,109.477)
C5: (-6.659,91.464,109.822)
O3': (-11.862,93.658,106.675)
Image (generated by PyMOL):
PyMOL image
show in jmol