ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HL2:E37:E38

Extra

PDB:
ATOM 1 O3' G A 36 24.937 -12.695 12.513 0.50 92.15 O
ATOM 2 P U A 37 26.427 -13.140 12.860 0.50 90.88 P
ATOM 3 OP1 U A 37 26.391 -14.449 13.550 0.50 89.33 O
ATOM 4 OP2 U A 37 27.096 -11.988 13.506 0.50 90.81 O
ATOM 5 O5' U A 37 27.180 -13.286 11.454 0.50 88.52 O
ATOM 6 C5' U A 37 26.749 -14.237 10.489 0.50 92.96 C
ATOM 7 C4' U A 37 27.303 -13.918 9.123 0.50 97.11 C
ATOM 8 O4' U A 37 26.921 -12.563 8.769 0.50 93.83 O
ATOM 9 C3' U A 37 28.822 -13.915 8.995 0.50 99.30 C
ATOM 10 O3' U A 37 29.399 -15.196 8.817 0.50 95.54 O
ATOM 11 C2' U A 37 29.032 -12.995 7.805 0.50 96.87 C
ATOM 12 O2' U A 37 28.647 -13.643 6.602 0.50 98.88 O
ATOM 13 C1' U A 37 27.999 -11.921 8.126 0.50 95.01 C
ATOM 14 N1 U A 37 28.506 -10.933 9.121 0.50 95.68 N
ATOM 15 C2 U A 37 29.481 -9.989 8.784 0.50101.83 C
ATOM 16 O2 U A 37 29.929 -9.973 7.636 0.50106.31 O
ATOM 17 N3 U A 37 29.900 -9.111 9.733 0.50 97.46 N
ATOM 18 C4 U A 37 29.390 -9.153 10.966 0.50 92.54 C
ATOM 19 O4 U A 37 29.799 -8.340 11.798 0.50 91.42 O
ATOM 20 C5 U A 37 28.405 -10.103 11.334 0.50 92.58 C
ATOM 21 C6 U A 37 28.004 -10.954 10.387 0.50 92.45 C
ATOM 22 P A A 38 30.927 -15.391 9.325 0.50 99.48 P
ATOM 23 OP1 A A 38 31.363 -16.727 8.861 0.50 96.21 O
ATOM 24 OP2 A A 38 31.035 -15.028 10.756 0.50 95.71 O
ATOM 25 O5' A A 38 31.771 -14.263 8.560 0.50 98.41 O
TER

ATOM 1 O3' U B 37 29.399 -15.196 8.817 0.50 95.54 O
ATOM 2 P A B 38 30.927 -15.391 9.325 0.50 99.48 P
ATOM 3 OP1 A B 38 31.363 -16.727 8.861 0.50 96.21 O
ATOM 4 OP2 A B 38 31.035 -15.028 10.756 0.50 95.71 O
ATOM 5 O5' A B 38 31.771 -14.263 8.560 0.50 98.41 O
ATOM 6 C5' A B 38 32.053 -14.435 7.179 0.50 97.43 C
ATOM 7 C4' A B 38 33.058 -13.438 6.657 0.50103.00 C
ATOM 8 O4' A B 38 32.659 -12.085 6.994 0.50107.73 O
ATOM 9 C3' A B 38 34.482 -13.542 7.188 0.50106.04 C
ATOM 10 O3' A B 38 35.245 -14.576 6.590 0.50105.44 O
ATOM 11 C2' A B 38 35.048 -12.152 6.923 0.50111.23 C
ATOM 12 O2' A B 38 35.503 -12.030 5.581 0.50105.82 O
ATOM 13 C1' A B 38 33.810 -11.270 7.102 0.50110.86 C
ATOM 14 N9 A B 38 33.800 -10.522 8.378 0.50109.65 N
ATOM 15 C8 A B 38 32.910 -10.618 9.415 0.50105.79 C
ATOM 16 N7 A B 38 33.156 -9.799 10.415 0.50102.47 N
ATOM 17 C5 A B 38 34.293 -9.129 10.000 0.50105.38 C
ATOM 18 C6 A B 38 35.072 -8.130 10.605 0.50105.75 C
ATOM 19 N6 A B 38 34.780 -7.621 11.807 0.50103.89 N
ATOM 20 N1 A B 38 36.148 -7.664 9.933 0.50104.58 N
ATOM 21 C2 A B 38 36.427 -8.174 8.730 0.50104.36 C
ATOM 22 N3 A B 38 35.767 -9.114 8.055 0.50106.79 N
ATOM 23 C4 A B 38 34.704 -9.555 8.754 0.50107.76 C
ATOM 24 P G B 39 34.871 -15.103 5.126 0.50106.27 P
ATOM 25 OP1 G B 39 34.290 -13.971 4.370 0.50107.88 O
ATOM 26 OP2 G B 39 34.105 -16.360 5.277 0.50100.47 O
ATOM 27 O5' G B 39 36.298 -15.467 4.501 0.50103.51 O
TER

Atoms:
C4: (29.390,-9.153,10.966)
N3: (29.900,-9.111,9.733)
OP1: (26.391,-14.449,13.550)
OP2: (27.096,-11.988,13.506)
C2: (29.481,-9.989,8.784)
C1': (27.999,-11.921,8.126)
C3': (28.822,-13.915,8.995)
O5': (27.180,-13.286,11.454)
O4': (26.921,-12.563,8.769)
C5': (26.749,-14.237,10.489)
P: (26.427,-13.140,12.860)
C4': (27.303,-13.918,9.123)
C2': (29.032,-12.995,7.805)
O2': (28.647,-13.643,6.602)
N1: (28.506,-10.933,9.121)
O4: (29.799,-8.340,11.798)
O2: (29.929,-9.973,7.636)
C6: (28.004,-10.954,10.387)
C5: (28.405,-10.103,11.334)
O3': (29.399,-15.196,8.817)
OP1: (31.363,-16.727,8.861)
OP2: (31.035,-15.028,10.756)
C3': (34.482,-13.542,7.188)
C1': (33.810,-11.270,7.102)
C5': (32.053,-14.435,7.179)
O4': (32.659,-12.085,6.994)
C8: (32.910,-10.618,9.415)
O2': (35.503,-12.030,5.581)
C6: (35.072,-8.130,10.605)
C5: (34.293,-9.129,10.000)
C4: (34.704,-9.555,8.754)
P: (30.927,-15.391,9.325)
C4': (33.058,-13.438,6.657)
C2': (35.048,-12.152,6.923)
C2: (36.427,-8.174,8.730)
N1: (36.148,-7.664,9.933)
N3: (35.767,-9.114,8.055)
N6: (34.780,-7.621,11.807)
N7: (33.156,-9.799,10.415)
N9: (33.800,-10.522,8.378)
O5': (31.771,-14.263,8.560)
O3': (35.245,-14.576,6.590)
Image (generated by PyMOL):
PyMOL image
show in jmol