Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A53:A54
Extra
PDB:
ATOM 1 O3' G A 52 67.841 -11.746 83.612 1.00 82.29 O
ATOM 2 P C A 53 66.231 -11.803 83.570 1.00 86.86 P
ATOM 3 OP1 C A 53 65.789 -12.426 84.843 1.00 82.55 O
ATOM 4 OP2 C A 53 65.816 -12.408 82.275 1.00 80.21 O
ATOM 5 O5' C A 53 65.782 -10.274 83.539 1.00 80.53 O
ATOM 6 C5' C A 53 66.199 -9.373 84.556 1.00 79.33 C
ATOM 7 C4' C A 53 66.146 -7.956 84.051 1.00 80.89 C
ATOM 8 O4' C A 53 67.167 -7.752 83.037 1.00 75.33 O
ATOM 9 C3' C A 53 64.853 -7.565 83.360 1.00 82.19 C
ATOM 10 O3' C A 53 63.813 -7.216 84.257 1.00 83.89 O
ATOM 11 C2' C A 53 65.286 -6.403 82.479 1.00 74.05 C
ATOM 12 O2' C A 53 65.337 -5.186 83.195 1.00 67.25 O
ATOM 13 C1' C A 53 66.688 -6.845 82.052 1.00 74.36 C
ATOM 14 N1 C A 53 66.686 -7.507 80.718 1.00 74.57 N
ATOM 15 C2 C A 53 66.433 -6.726 79.584 1.00 69.73 C
ATOM 16 O2 C A 53 66.249 -5.517 79.721 1.00 76.32 O
ATOM 17 N3 C A 53 66.391 -7.302 78.372 1.00 66.08 N
ATOM 18 C4 C A 53 66.587 -8.607 78.253 1.00 70.51 C
ATOM 19 N4 C A 53 66.519 -9.136 77.030 1.00 71.76 N
ATOM 20 C5 C A 53 66.858 -9.432 79.380 1.00 72.80 C
ATOM 21 C6 C A 53 66.904 -8.847 80.582 1.00 74.81 C
ATOM 22 P A A 54 62.345 -6.911 83.676 1.00 84.93 P
ATOM 23 OP1 A A 54 61.393 -6.695 84.806 1.00 84.70 O
ATOM 24 OP2 A A 54 62.051 -7.959 82.666 1.00 78.10 O
ATOM 25 O5' A A 54 62.543 -5.537 82.894 1.00 69.84 O
TER
ATOM 1 O3' C B 53 63.813 -7.216 84.257 1.00 83.89 O
ATOM 2 P A B 54 62.345 -6.911 83.676 1.00 84.93 P
ATOM 3 OP1 A B 54 61.393 -6.695 84.806 1.00 84.70 O
ATOM 4 OP2 A B 54 62.051 -7.959 82.666 1.00 78.10 O
ATOM 5 O5' A B 54 62.543 -5.537 82.894 1.00 69.84 O
ATOM 6 C5' A B 54 61.430 -4.855 82.361 1.00 72.33 C
ATOM 7 C4' A B 54 61.885 -3.721 81.497 1.00 70.72 C
ATOM 8 O4' A B 54 62.919 -4.195 80.612 1.00 69.37 O
ATOM 9 C3' A B 54 60.791 -3.176 80.602 1.00 70.09 C
ATOM 10 O3' A B 54 60.048 -2.190 81.317 1.00 75.04 O
ATOM 11 C2' A B 54 61.572 -2.647 79.402 1.00 65.65 C
ATOM 12 O2' A B 54 62.088 -1.344 79.610 1.00 72.87 O
ATOM 13 C1' A B 54 62.741 -3.641 79.326 1.00 66.48 C
ATOM 14 N9 A B 54 62.581 -4.758 78.392 1.00 65.95 N
ATOM 15 C8 A B 54 62.892 -6.077 78.634 1.00 68.92 C
ATOM 16 N7 A B 54 62.664 -6.869 77.620 1.00 65.59 N
ATOM 17 C5 A B 54 62.171 -6.025 76.643 1.00 65.76 C
ATOM 18 C6 A B 54 61.755 -6.257 75.332 1.00 68.98 C
ATOM 19 N6 A B 54 61.764 -7.460 74.764 1.00 67.59 N
ATOM 20 N1 A B 54 61.323 -5.206 74.610 1.00 73.73 N
ATOM 21 C2 A B 54 61.310 -3.996 75.191 1.00 70.73 C
ATOM 22 N3 A B 54 61.682 -3.645 76.422 1.00 68.47 N
ATOM 23 C4 A B 54 62.110 -4.721 77.104 1.00 68.83 C
ATOM 24 P A B 55 58.437 -2.142 81.209 1.00 70.54 P
ATOM 25 OP1 A B 55 58.115 -1.727 79.823 1.00 72.07 O
ATOM 26 OP2 A B 55 57.914 -1.350 82.356 1.00 61.00 O
ATOM 27 O5' A B 55 57.941 -3.658 81.338 1.00 78.70 O
TER
ATOM 2 P C A 53 66.231 -11.803 83.570 1.00 86.86 P
ATOM 3 OP1 C A 53 65.789 -12.426 84.843 1.00 82.55 O
ATOM 4 OP2 C A 53 65.816 -12.408 82.275 1.00 80.21 O
ATOM 5 O5' C A 53 65.782 -10.274 83.539 1.00 80.53 O
ATOM 6 C5' C A 53 66.199 -9.373 84.556 1.00 79.33 C
ATOM 7 C4' C A 53 66.146 -7.956 84.051 1.00 80.89 C
ATOM 8 O4' C A 53 67.167 -7.752 83.037 1.00 75.33 O
ATOM 9 C3' C A 53 64.853 -7.565 83.360 1.00 82.19 C
ATOM 10 O3' C A 53 63.813 -7.216 84.257 1.00 83.89 O
ATOM 11 C2' C A 53 65.286 -6.403 82.479 1.00 74.05 C
ATOM 12 O2' C A 53 65.337 -5.186 83.195 1.00 67.25 O
ATOM 13 C1' C A 53 66.688 -6.845 82.052 1.00 74.36 C
ATOM 14 N1 C A 53 66.686 -7.507 80.718 1.00 74.57 N
ATOM 15 C2 C A 53 66.433 -6.726 79.584 1.00 69.73 C
ATOM 16 O2 C A 53 66.249 -5.517 79.721 1.00 76.32 O
ATOM 17 N3 C A 53 66.391 -7.302 78.372 1.00 66.08 N
ATOM 18 C4 C A 53 66.587 -8.607 78.253 1.00 70.51 C
ATOM 19 N4 C A 53 66.519 -9.136 77.030 1.00 71.76 N
ATOM 20 C5 C A 53 66.858 -9.432 79.380 1.00 72.80 C
ATOM 21 C6 C A 53 66.904 -8.847 80.582 1.00 74.81 C
ATOM 22 P A A 54 62.345 -6.911 83.676 1.00 84.93 P
ATOM 23 OP1 A A 54 61.393 -6.695 84.806 1.00 84.70 O
ATOM 24 OP2 A A 54 62.051 -7.959 82.666 1.00 78.10 O
ATOM 25 O5' A A 54 62.543 -5.537 82.894 1.00 69.84 O
TER
ATOM 1 O3' C B 53 63.813 -7.216 84.257 1.00 83.89 O
ATOM 2 P A B 54 62.345 -6.911 83.676 1.00 84.93 P
ATOM 3 OP1 A B 54 61.393 -6.695 84.806 1.00 84.70 O
ATOM 4 OP2 A B 54 62.051 -7.959 82.666 1.00 78.10 O
ATOM 5 O5' A B 54 62.543 -5.537 82.894 1.00 69.84 O
ATOM 6 C5' A B 54 61.430 -4.855 82.361 1.00 72.33 C
ATOM 7 C4' A B 54 61.885 -3.721 81.497 1.00 70.72 C
ATOM 8 O4' A B 54 62.919 -4.195 80.612 1.00 69.37 O
ATOM 9 C3' A B 54 60.791 -3.176 80.602 1.00 70.09 C
ATOM 10 O3' A B 54 60.048 -2.190 81.317 1.00 75.04 O
ATOM 11 C2' A B 54 61.572 -2.647 79.402 1.00 65.65 C
ATOM 12 O2' A B 54 62.088 -1.344 79.610 1.00 72.87 O
ATOM 13 C1' A B 54 62.741 -3.641 79.326 1.00 66.48 C
ATOM 14 N9 A B 54 62.581 -4.758 78.392 1.00 65.95 N
ATOM 15 C8 A B 54 62.892 -6.077 78.634 1.00 68.92 C
ATOM 16 N7 A B 54 62.664 -6.869 77.620 1.00 65.59 N
ATOM 17 C5 A B 54 62.171 -6.025 76.643 1.00 65.76 C
ATOM 18 C6 A B 54 61.755 -6.257 75.332 1.00 68.98 C
ATOM 19 N6 A B 54 61.764 -7.460 74.764 1.00 67.59 N
ATOM 20 N1 A B 54 61.323 -5.206 74.610 1.00 73.73 N
ATOM 21 C2 A B 54 61.310 -3.996 75.191 1.00 70.73 C
ATOM 22 N3 A B 54 61.682 -3.645 76.422 1.00 68.47 N
ATOM 23 C4 A B 54 62.110 -4.721 77.104 1.00 68.83 C
ATOM 24 P A B 55 58.437 -2.142 81.209 1.00 70.54 P
ATOM 25 OP1 A B 55 58.115 -1.727 79.823 1.00 72.07 O
ATOM 26 OP2 A B 55 57.914 -1.350 82.356 1.00 61.00 O
ATOM 27 O5' A B 55 57.941 -3.658 81.338 1.00 78.70 O
TER
Atoms:
C2: (66.433,-6.726,79.584)
OP1: (65.789,-12.426,84.843)
OP2: (65.816,-12.408,82.275)
C4: (66.587,-8.607,78.253)
O5': (65.782,-10.274,83.539)
C3': (64.853,-7.565,83.360)
C1': (66.688,-6.845,82.052)
O4': (67.167,-7.752,83.037)
C5': (66.199,-9.373,84.556)
P: (66.231,-11.803,83.570)
O2: (66.249,-5.517,79.721)
C4': (66.146,-7.956,84.051)
C2': (65.286,-6.403,82.479)
O2': (65.337,-5.186,83.195)
N1: (66.686,-7.507,80.718)
N3: (66.391,-7.302,78.372)
N4: (66.519,-9.136,77.030)
C6: (66.904,-8.847,80.582)
C5: (66.858,-9.432,79.380)
O3': (63.813,-7.216,84.257)
OP1: (65.789,-12.426,84.843)
OP2: (65.816,-12.408,82.275)
C4: (66.587,-8.607,78.253)
O5': (65.782,-10.274,83.539)
C3': (64.853,-7.565,83.360)
C1': (66.688,-6.845,82.052)
O4': (67.167,-7.752,83.037)
C5': (66.199,-9.373,84.556)
P: (66.231,-11.803,83.570)
O2: (66.249,-5.517,79.721)
C4': (66.146,-7.956,84.051)
C2': (65.286,-6.403,82.479)
O2': (65.337,-5.186,83.195)
N1: (66.686,-7.507,80.718)
N3: (66.391,-7.302,78.372)
N4: (66.519,-9.136,77.030)
C6: (66.904,-8.847,80.582)
C5: (66.858,-9.432,79.380)
O3': (63.813,-7.216,84.257)
OP1: (61.393,-6.695,84.806)
OP2: (62.051,-7.959,82.666)
C3': (60.791,-3.176,80.602)
C1': (62.741,-3.641,79.326)
C5': (61.430,-4.855,82.361)
O4': (62.919,-4.195,80.612)
C8: (62.892,-6.077,78.634)
O2': (62.088,-1.344,79.610)
C6: (61.755,-6.257,75.332)
C5: (62.171,-6.025,76.643)
C4: (62.110,-4.721,77.104)
P: (62.345,-6.911,83.676)
C4': (61.885,-3.721,81.497)
C2': (61.572,-2.647,79.402)
C2: (61.310,-3.996,75.191)
N1: (61.323,-5.206,74.610)
N3: (61.682,-3.645,76.422)
N6: (61.764,-7.460,74.764)
N7: (62.664,-6.869,77.620)
N9: (62.581,-4.758,78.392)
O5': (62.543,-5.537,82.894)
O3': (60.048,-2.190,81.317)
OP2: (62.051,-7.959,82.666)
C3': (60.791,-3.176,80.602)
C1': (62.741,-3.641,79.326)
C5': (61.430,-4.855,82.361)
O4': (62.919,-4.195,80.612)
C8: (62.892,-6.077,78.634)
O2': (62.088,-1.344,79.610)
C6: (61.755,-6.257,75.332)
C5: (62.171,-6.025,76.643)
C4: (62.110,-4.721,77.104)
P: (62.345,-6.911,83.676)
C4': (61.885,-3.721,81.497)
C2': (61.572,-2.647,79.402)
C2: (61.310,-3.996,75.191)
N1: (61.323,-5.206,74.610)
N3: (61.682,-3.645,76.422)
N6: (61.764,-7.460,74.764)
N7: (62.664,-6.869,77.620)
N9: (62.581,-4.758,78.392)
O5': (62.543,-5.537,82.894)
O3': (60.048,-2.190,81.317)
Image (generated by PyMOL):