Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2038:A2039
Extra
PDB:
ATOM 1 O3' C A2037 -60.315 -94.223 -11.766 1.00 0.01 O
ATOM 2 P C A2038 -60.354 -92.676 -11.460 1.00 0.01 P
ATOM 3 OP1 C A2038 -60.814 -92.519 -10.083 1.00 0.01 O
ATOM 4 OP2 C A2038 -61.137 -92.049 -12.548 1.00 0.01 O
ATOM 5 O5' C A2038 -58.825 -92.276 -11.551 1.00 0.01 O
ATOM 6 C5' C A2038 -57.959 -92.595 -10.500 1.00 0.01 C
ATOM 7 C4' C A2038 -56.545 -92.227 -10.811 1.00 0.01 C
ATOM 8 O4' C A2038 -56.163 -92.786 -12.067 1.00 0.01 O
ATOM 9 C3' C A2038 -56.246 -90.758 -10.971 1.00 0.01 C
ATOM 10 O3' C A2038 -56.110 -90.097 -9.751 1.00 0.01 O
ATOM 11 C2' C A2038 -54.966 -90.780 -11.752 1.00 0.01 C
ATOM 12 O2' C A2038 -53.887 -91.089 -10.901 1.00 0.01 O
ATOM 13 C1' C A2038 -55.214 -91.955 -12.680 1.00 0.01 C
ATOM 14 N1 C A2038 -55.749 -91.526 -13.967 1.00 0.01 N
ATOM 15 C2 C A2038 -54.889 -90.848 -14.767 1.00 0.01 C
ATOM 16 O2 C A2038 -53.788 -90.667 -14.328 1.00 0.01 O
ATOM 17 N3 C A2038 -55.248 -90.423 -15.956 1.00 0.01 N
ATOM 18 C4 C A2038 -56.475 -90.674 -16.327 1.00 0.01 C
ATOM 19 N4 C A2038 -56.804 -90.229 -17.517 1.00 0.01 N
ATOM 20 C5 C A2038 -57.419 -91.386 -15.544 1.00 0.01 C
ATOM 21 C6 C A2038 -57.009 -91.798 -14.357 1.00 0.01 C
ATOM 22 P G A2039 -56.056 -88.511 -9.715 1.00 0.01 P
ATOM 23 OP1 G A2039 -56.554 -88.122 -8.405 1.00 0.01 O
ATOM 24 OP2 G A2039 -56.743 -87.991 -10.904 1.00 0.01 O
ATOM 25 O5' G A2039 -54.505 -88.217 -9.833 1.00 0.01 O
TER
ATOM 1 O3' C B2038 -56.110 -90.097 -9.751 1.00 0.01 O
ATOM 2 P G B2039 -56.056 -88.511 -9.715 1.00 0.01 P
ATOM 3 OP1 G B2039 -56.554 -88.122 -8.405 1.00 0.01 O
ATOM 4 OP2 G B2039 -56.743 -87.991 -10.904 1.00 0.01 O
ATOM 5 O5' G B2039 -54.505 -88.217 -9.833 1.00 0.01 O
ATOM 6 C5' G B2039 -54.020 -86.959 -10.300 1.00 0.01 C
ATOM 7 C4' G B2039 -52.674 -87.096 -10.967 1.00 0.01 C
ATOM 8 O4' G B2039 -52.823 -87.869 -12.161 1.00 0.01 O
ATOM 9 C3' G B2039 -52.025 -85.816 -11.430 1.00 0.01 C
ATOM 10 O3' G B2039 -51.252 -85.227 -10.431 1.00 0.01 O
ATOM 11 C2' G B2039 -51.191 -86.252 -12.600 1.00 0.01 C
ATOM 12 O2' G B2039 -49.980 -86.785 -12.148 1.00 0.01 O
ATOM 13 C1' G B2039 -52.001 -87.375 -13.169 1.00 0.01 C
ATOM 14 N9 G B2039 -52.842 -86.949 -14.284 1.00 0.01 N
ATOM 15 C8 G B2039 -54.176 -87.208 -14.426 1.00 0.01 C
ATOM 16 N7 G B2039 -54.669 -86.750 -15.528 1.00 0.01 N
ATOM 17 C5 G B2039 -53.583 -86.201 -16.143 1.00 0.01 C
ATOM 18 C6 G B2039 -53.518 -85.576 -17.355 1.00 0.01 C
ATOM 19 O6 G B2039 -54.441 -85.394 -18.119 1.00 0.01 O
ATOM 20 N1 G B2039 -52.251 -85.154 -17.641 1.00 0.01 N
ATOM 21 C2 G B2039 -51.166 -85.287 -16.844 1.00 0.01 C
ATOM 22 N2 G B2039 -50.020 -84.782 -17.306 1.00 0.01 N
ATOM 23 N3 G B2039 -51.209 -85.882 -15.681 1.00 0.01 N
ATOM 24 C4 G B2039 -52.449 -86.316 -15.412 1.00 0.01 C
ATOM 25 P C B2040 -51.433 -83.689 -10.087 1.00 0.01 P
ATOM 26 OP1 C B2040 -50.701 -83.468 -8.848 1.00 0.01 O
ATOM 27 OP2 C B2040 -52.880 -83.393 -10.130 1.00 0.01 O
ATOM 28 O5' C B2040 -50.716 -82.966 -11.284 1.00 0.01 O
TER
ATOM 2 P C A2038 -60.354 -92.676 -11.460 1.00 0.01 P
ATOM 3 OP1 C A2038 -60.814 -92.519 -10.083 1.00 0.01 O
ATOM 4 OP2 C A2038 -61.137 -92.049 -12.548 1.00 0.01 O
ATOM 5 O5' C A2038 -58.825 -92.276 -11.551 1.00 0.01 O
ATOM 6 C5' C A2038 -57.959 -92.595 -10.500 1.00 0.01 C
ATOM 7 C4' C A2038 -56.545 -92.227 -10.811 1.00 0.01 C
ATOM 8 O4' C A2038 -56.163 -92.786 -12.067 1.00 0.01 O
ATOM 9 C3' C A2038 -56.246 -90.758 -10.971 1.00 0.01 C
ATOM 10 O3' C A2038 -56.110 -90.097 -9.751 1.00 0.01 O
ATOM 11 C2' C A2038 -54.966 -90.780 -11.752 1.00 0.01 C
ATOM 12 O2' C A2038 -53.887 -91.089 -10.901 1.00 0.01 O
ATOM 13 C1' C A2038 -55.214 -91.955 -12.680 1.00 0.01 C
ATOM 14 N1 C A2038 -55.749 -91.526 -13.967 1.00 0.01 N
ATOM 15 C2 C A2038 -54.889 -90.848 -14.767 1.00 0.01 C
ATOM 16 O2 C A2038 -53.788 -90.667 -14.328 1.00 0.01 O
ATOM 17 N3 C A2038 -55.248 -90.423 -15.956 1.00 0.01 N
ATOM 18 C4 C A2038 -56.475 -90.674 -16.327 1.00 0.01 C
ATOM 19 N4 C A2038 -56.804 -90.229 -17.517 1.00 0.01 N
ATOM 20 C5 C A2038 -57.419 -91.386 -15.544 1.00 0.01 C
ATOM 21 C6 C A2038 -57.009 -91.798 -14.357 1.00 0.01 C
ATOM 22 P G A2039 -56.056 -88.511 -9.715 1.00 0.01 P
ATOM 23 OP1 G A2039 -56.554 -88.122 -8.405 1.00 0.01 O
ATOM 24 OP2 G A2039 -56.743 -87.991 -10.904 1.00 0.01 O
ATOM 25 O5' G A2039 -54.505 -88.217 -9.833 1.00 0.01 O
TER
ATOM 1 O3' C B2038 -56.110 -90.097 -9.751 1.00 0.01 O
ATOM 2 P G B2039 -56.056 -88.511 -9.715 1.00 0.01 P
ATOM 3 OP1 G B2039 -56.554 -88.122 -8.405 1.00 0.01 O
ATOM 4 OP2 G B2039 -56.743 -87.991 -10.904 1.00 0.01 O
ATOM 5 O5' G B2039 -54.505 -88.217 -9.833 1.00 0.01 O
ATOM 6 C5' G B2039 -54.020 -86.959 -10.300 1.00 0.01 C
ATOM 7 C4' G B2039 -52.674 -87.096 -10.967 1.00 0.01 C
ATOM 8 O4' G B2039 -52.823 -87.869 -12.161 1.00 0.01 O
ATOM 9 C3' G B2039 -52.025 -85.816 -11.430 1.00 0.01 C
ATOM 10 O3' G B2039 -51.252 -85.227 -10.431 1.00 0.01 O
ATOM 11 C2' G B2039 -51.191 -86.252 -12.600 1.00 0.01 C
ATOM 12 O2' G B2039 -49.980 -86.785 -12.148 1.00 0.01 O
ATOM 13 C1' G B2039 -52.001 -87.375 -13.169 1.00 0.01 C
ATOM 14 N9 G B2039 -52.842 -86.949 -14.284 1.00 0.01 N
ATOM 15 C8 G B2039 -54.176 -87.208 -14.426 1.00 0.01 C
ATOM 16 N7 G B2039 -54.669 -86.750 -15.528 1.00 0.01 N
ATOM 17 C5 G B2039 -53.583 -86.201 -16.143 1.00 0.01 C
ATOM 18 C6 G B2039 -53.518 -85.576 -17.355 1.00 0.01 C
ATOM 19 O6 G B2039 -54.441 -85.394 -18.119 1.00 0.01 O
ATOM 20 N1 G B2039 -52.251 -85.154 -17.641 1.00 0.01 N
ATOM 21 C2 G B2039 -51.166 -85.287 -16.844 1.00 0.01 C
ATOM 22 N2 G B2039 -50.020 -84.782 -17.306 1.00 0.01 N
ATOM 23 N3 G B2039 -51.209 -85.882 -15.681 1.00 0.01 N
ATOM 24 C4 G B2039 -52.449 -86.316 -15.412 1.00 0.01 C
ATOM 25 P C B2040 -51.433 -83.689 -10.087 1.00 0.01 P
ATOM 26 OP1 C B2040 -50.701 -83.468 -8.848 1.00 0.01 O
ATOM 27 OP2 C B2040 -52.880 -83.393 -10.130 1.00 0.01 O
ATOM 28 O5' C B2040 -50.716 -82.966 -11.284 1.00 0.01 O
TER
Atoms:
C2: (-54.889,-90.848,-14.767)
OP1: (-60.814,-92.519,-10.083)
OP2: (-61.137,-92.049,-12.548)
C4: (-56.475,-90.674,-16.327)
O5': (-58.825,-92.276,-11.551)
C3': (-56.246,-90.758,-10.971)
C1': (-55.214,-91.955,-12.680)
O4': (-56.163,-92.786,-12.067)
C5': (-57.959,-92.595,-10.500)
P: (-60.354,-92.676,-11.460)
O2: (-53.788,-90.667,-14.328)
C4': (-56.545,-92.227,-10.811)
C2': (-54.966,-90.780,-11.752)
O2': (-53.887,-91.089,-10.901)
N1: (-55.749,-91.526,-13.967)
N3: (-55.248,-90.423,-15.956)
N4: (-56.804,-90.229,-17.517)
C6: (-57.009,-91.798,-14.357)
C5: (-57.419,-91.386,-15.544)
O3': (-56.110,-90.097,-9.751)
OP1: (-60.814,-92.519,-10.083)
OP2: (-61.137,-92.049,-12.548)
C4: (-56.475,-90.674,-16.327)
O5': (-58.825,-92.276,-11.551)
C3': (-56.246,-90.758,-10.971)
C1': (-55.214,-91.955,-12.680)
O4': (-56.163,-92.786,-12.067)
C5': (-57.959,-92.595,-10.500)
P: (-60.354,-92.676,-11.460)
O2: (-53.788,-90.667,-14.328)
C4': (-56.545,-92.227,-10.811)
C2': (-54.966,-90.780,-11.752)
O2': (-53.887,-91.089,-10.901)
N1: (-55.749,-91.526,-13.967)
N3: (-55.248,-90.423,-15.956)
N4: (-56.804,-90.229,-17.517)
C6: (-57.009,-91.798,-14.357)
C5: (-57.419,-91.386,-15.544)
O3': (-56.110,-90.097,-9.751)
OP1: (-56.554,-88.122,-8.405)
OP2: (-56.743,-87.991,-10.904)
C3': (-52.025,-85.816,-11.430)
C1': (-52.001,-87.375,-13.169)
C5': (-54.020,-86.959,-10.300)
O6: (-54.441,-85.394,-18.119)
O4': (-52.823,-87.869,-12.161)
C8: (-54.176,-87.208,-14.426)
C2: (-51.166,-85.287,-16.844)
C6: (-53.518,-85.576,-17.355)
C5: (-53.583,-86.201,-16.143)
C4: (-52.449,-86.316,-15.412)
P: (-56.056,-88.511,-9.715)
C4': (-52.674,-87.096,-10.967)
C2': (-51.191,-86.252,-12.600)
O2': (-49.980,-86.785,-12.148)
N1: (-52.251,-85.154,-17.641)
N2: (-50.020,-84.782,-17.306)
N3: (-51.209,-85.882,-15.681)
N7: (-54.669,-86.750,-15.528)
N9: (-52.842,-86.949,-14.284)
O5': (-54.505,-88.217,-9.833)
O3': (-51.252,-85.227,-10.431)
OP2: (-56.743,-87.991,-10.904)
C3': (-52.025,-85.816,-11.430)
C1': (-52.001,-87.375,-13.169)
C5': (-54.020,-86.959,-10.300)
O6: (-54.441,-85.394,-18.119)
O4': (-52.823,-87.869,-12.161)
C8: (-54.176,-87.208,-14.426)
C2: (-51.166,-85.287,-16.844)
C6: (-53.518,-85.576,-17.355)
C5: (-53.583,-86.201,-16.143)
C4: (-52.449,-86.316,-15.412)
P: (-56.056,-88.511,-9.715)
C4': (-52.674,-87.096,-10.967)
C2': (-51.191,-86.252,-12.600)
O2': (-49.980,-86.785,-12.148)
N1: (-52.251,-85.154,-17.641)
N2: (-50.020,-84.782,-17.306)
N3: (-51.209,-85.882,-15.681)
N7: (-54.669,-86.750,-15.528)
N9: (-52.842,-86.949,-14.284)
O5': (-54.505,-88.217,-9.833)
O3': (-51.252,-85.227,-10.431)
Image (generated by PyMOL):