ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1G59:B13:B7

Extra

PDB:
ATOM 1 O3' U A 12 17.688 67.541 48.009 1.00 42.73 O
ATOM 2 P A A 13 16.552 68.425 47.241 1.00 40.09 P
ATOM 3 OP1 A A 13 17.216 69.158 46.134 1.00 41.70 O
ATOM 4 OP2 A A 13 15.767 69.164 48.255 1.00 40.14 O
ATOM 5 O5' A A 13 15.583 67.313 46.598 1.00 40.93 O
ATOM 6 C5' A A 13 16.060 66.489 45.544 1.00 40.63 C
ATOM 7 C4' A A 13 14.951 65.672 44.888 1.00 42.56 C
ATOM 8 O4' A A 13 14.406 64.704 45.805 1.00 41.43 O
ATOM 9 C3' A A 13 13.817 66.545 44.469 1.00 46.77 C
ATOM 10 O3' A A 13 13.957 67.011 43.131 1.00 52.29 O
ATOM 11 C2' A A 13 12.592 65.731 44.645 1.00 42.36 C
ATOM 12 O2' A A 13 12.162 65.170 43.401 1.00 48.44 O
ATOM 13 C1' A A 13 12.965 64.638 45.608 1.00 35.67 C
ATOM 14 N9 A A 13 12.239 64.858 46.865 1.00 30.98 N
ATOM 15 C8 A A 13 12.677 65.433 48.032 1.00 29.41 C
ATOM 16 N7 A A 13 11.762 65.501 48.961 1.00 29.67 N
ATOM 17 C5 A A 13 10.639 64.929 48.364 1.00 30.97 C
ATOM 18 C6 A A 13 9.331 64.698 48.825 1.00 30.47 C
ATOM 19 N6 A A 13 8.916 65.035 50.050 1.00 21.23 N
ATOM 20 N1 A A 13 8.470 64.105 47.967 1.00 31.49 N
ATOM 21 C2 A A 13 8.892 63.775 46.751 1.00 25.04 C
ATOM 22 N3 A A 13 10.089 63.942 46.210 1.00 27.62 N
ATOM 23 C4 A A 13 10.924 64.534 47.089 1.00 30.90 C
ATOM 24 P G A 14 13.680 68.563 42.816 1.00 50.53 P
ATOM 25 OP1 G A 14 13.954 68.802 41.383 1.00 48.81 O
ATOM 26 OP2 G A 14 14.366 69.374 43.849 1.00 50.58 O
ATOM 27 O5' G A 14 12.106 68.698 43.062 1.00 50.50 O
TER

ATOM 1 O3' A B 6 12.896 72.805 56.259 1.00 59.29 O
ATOM 2 P U B 7 13.479 71.408 55.699 1.00 57.76 P
ATOM 3 OP1 U B 7 14.039 70.649 56.848 1.00 55.72 O
ATOM 4 OP2 U B 7 14.320 71.676 54.510 1.00 58.10 O
ATOM 5 O5' U B 7 12.136 70.684 55.208 1.00 48.09 O
ATOM 6 C5' U B 7 10.939 70.827 55.963 1.00 40.80 C
ATOM 7 C4' U B 7 10.044 69.601 55.875 1.00 40.82 C
ATOM 8 O4' U B 7 9.626 69.383 54.498 1.00 42.30 O
ATOM 9 C3' U B 7 10.783 68.351 56.316 1.00 41.33 C
ATOM 10 O3' U B 7 10.535 68.016 57.694 1.00 38.80 O
ATOM 11 C2' U B 7 10.331 67.285 55.402 1.00 42.31 C
ATOM 12 O2' U B 7 9.226 66.595 55.977 1.00 49.04 O
ATOM 13 C1' U B 7 9.879 67.990 54.142 1.00 40.49 C
ATOM 14 N1 U B 7 10.950 67.875 53.117 1.00 38.84 N
ATOM 15 C2 U B 7 10.789 66.928 52.127 1.00 41.12 C
ATOM 16 O2 U B 7 9.781 66.235 52.047 1.00 44.53 O
ATOM 17 N3 U B 7 11.820 66.825 51.209 1.00 38.42 N
ATOM 18 C4 U B 7 12.987 67.579 51.200 1.00 40.04 C
ATOM 19 O4 U B 7 13.861 67.382 50.352 1.00 41.96 O
ATOM 20 C5 U B 7 13.067 68.545 52.267 1.00 34.54 C
ATOM 21 C6 U B 7 12.071 68.662 53.175 1.00 36.92 C
ATOM 22 P C B 8 11.693 67.285 58.588 1.00 33.71 P
ATOM 23 OP1 C B 8 11.235 67.238 59.991 1.00 42.14 O
ATOM 24 OP2 C B 8 13.002 67.905 58.259 1.00 36.25 O
ATOM 25 O5' C B 8 11.687 65.765 58.007 1.00 40.66 O
TER

Atoms:
OP1: (17.216,69.158,46.134)
OP2: (15.767,69.164,48.255)
C3': (13.817,66.545,44.469)
C1': (12.965,64.638,45.608)
C5': (16.060,66.489,45.544)
O4': (14.406,64.704,45.805)
C8: (12.677,65.433,48.032)
O2': (12.162,65.170,43.401)
C6: (9.331,64.698,48.825)
C5: (10.639,64.929,48.364)
C4: (10.924,64.534,47.089)
P: (16.552,68.425,47.241)
C4': (14.951,65.672,44.888)
C2': (12.592,65.731,44.645)
C2: (8.892,63.775,46.751)
N1: (8.470,64.105,47.967)
N3: (10.089,63.942,46.210)
N6: (8.916,65.035,50.050)
N7: (11.762,65.501,48.961)
N9: (12.239,64.858,46.865)
O5': (15.583,67.313,46.598)
O3': (13.957,67.011,43.131)
C4: (12.987,67.579,51.200)
N3: (11.820,66.825,51.209)
OP1: (14.039,70.649,56.848)
OP2: (14.320,71.676,54.510)
C2: (10.789,66.928,52.127)
C1': (9.879,67.990,54.142)
C3': (10.783,68.351,56.316)
O5': (12.136,70.684,55.208)
O4': (9.626,69.383,54.498)
C5': (10.939,70.827,55.963)
P: (13.479,71.408,55.699)
C4': (10.044,69.601,55.875)
C2': (10.331,67.285,55.402)
O2': (9.226,66.595,55.977)
N1: (10.950,67.875,53.117)
O4: (13.861,67.382,50.352)
O2: (9.781,66.235,52.047)
C6: (12.071,68.662,53.175)
C5: (13.067,68.545,52.267)
O3': (10.535,68.016,57.694)
Image (generated by PyMOL):
PyMOL image
show in jmol