Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:0557:0577
Extra
PDB:
ATOM 1 O3' G A 556 0.426 94.801 112.596 1.00 54.29 O
ATOM 2 P A A 557 0.014 93.557 113.526 1.00 56.13 P
ATOM 3 OP1 A A 557 0.738 93.756 114.803 1.00 56.19 O
ATOM 4 OP2 A A 557 0.156 92.270 112.793 1.00 53.65 O
ATOM 5 O5' A A 557 -1.541 93.786 113.773 1.00 58.66 O
ATOM 6 C5' A A 557 -2.040 94.169 115.064 1.00 59.39 C
ATOM 7 C4' A A 557 -1.903 95.657 115.248 1.00 61.15 C
ATOM 8 O4' A A 557 -2.376 96.347 114.064 1.00 61.67 O
ATOM 9 C3' A A 557 -2.732 96.220 116.381 1.00 62.62 C
ATOM 10 O3' A A 557 -2.088 96.063 117.631 1.00 65.35 O
ATOM 11 C2' A A 557 -2.940 97.661 115.944 1.00 62.32 C
ATOM 12 O2' A A 557 -1.815 98.483 116.154 1.00 62.28 O
ATOM 13 C1' A A 557 -3.155 97.469 114.443 1.00 62.46 C
ATOM 14 N9 A A 557 -4.552 97.164 114.130 1.00 62.93 N
ATOM 15 C8 A A 557 -5.053 96.039 113.515 1.00 63.16 C
ATOM 16 N7 A A 557 -6.358 96.038 113.398 1.00 63.67 N
ATOM 17 C5 A A 557 -6.744 97.244 113.967 1.00 62.76 C
ATOM 18 C6 A A 557 -8.001 97.837 114.152 1.00 62.21 C
ATOM 19 N6 A A 557 -9.144 97.269 113.768 1.00 61.86 N
ATOM 20 N1 A A 557 -8.044 99.049 114.750 1.00 62.01 N
ATOM 21 C2 A A 557 -6.891 99.617 115.130 1.00 61.84 C
ATOM 22 N3 A A 557 -5.647 99.158 115.011 1.00 62.33 N
ATOM 23 C4 A A 557 -5.643 97.951 114.414 1.00 62.57 C
ATOM 24 P C A 558 -2.957 95.687 118.930 1.00 67.25 P
ATOM 25 OP1 C A 558 -1.994 95.267 119.984 1.00 67.34 O
ATOM 26 OP2 C A 558 -4.059 94.767 118.532 1.00 63.72 O
ATOM 27 O5' C A 558 -3.569 97.089 119.366 1.00 66.62 O
TER
ATOM 1 O3' G B 576 -7.813 90.291 106.952 1.00 65.56 O
ATOM 2 P U B 577 -8.172 91.317 105.760 1.00 68.00 P
ATOM 3 OP1 U B 577 -8.734 90.553 104.611 1.00 65.85 O
ATOM 4 OP2 U B 577 -7.006 92.215 105.542 1.00 67.10 O
ATOM 5 O5' U B 577 -9.306 92.240 106.398 1.00 67.73 O
ATOM 6 C5' U B 577 -10.580 91.694 106.823 1.00 67.74 C
ATOM 7 C4' U B 577 -11.074 92.423 108.052 1.00 67.58 C
ATOM 8 O4' U B 577 -10.382 91.937 109.228 1.00 67.72 O
ATOM 9 C3' U B 577 -10.818 93.922 108.049 1.00 68.68 C
ATOM 10 O3' U B 577 -11.813 94.632 107.317 1.00 69.63 O
ATOM 11 C2' U B 577 -10.807 94.268 109.534 1.00 69.09 C
ATOM 12 O2' U B 577 -12.092 94.481 110.084 1.00 69.85 O
ATOM 13 C1' U B 577 -10.174 93.008 110.140 1.00 68.63 C
ATOM 14 N1 U B 577 -8.731 93.121 110.417 1.00 69.12 N
ATOM 15 C2 U B 577 -8.316 94.049 111.371 1.00 70.25 C
ATOM 16 O2 U B 577 -9.089 94.765 111.993 1.00 68.88 O
ATOM 17 N3 U B 577 -6.960 94.105 111.569 1.00 70.19 N
ATOM 18 C4 U B 577 -5.996 93.355 110.935 1.00 70.29 C
ATOM 19 O4 U B 577 -4.813 93.535 111.220 1.00 72.53 O
ATOM 20 C5 U B 577 -6.496 92.415 109.979 1.00 69.81 C
ATOM 21 C6 U B 577 -7.811 92.334 109.755 1.00 69.64 C
ATOM 22 P A B 578 -11.400 95.927 106.461 1.00 70.09 P
ATOM 23 OP1 A B 578 -12.596 96.399 105.727 1.00 71.99 O
ATOM 24 OP2 A B 578 -10.168 95.605 105.705 1.00 72.47 O
ATOM 25 O5' A B 578 -11.049 97.013 107.567 1.00 69.18 O
TER
ATOM 2 P A A 557 0.014 93.557 113.526 1.00 56.13 P
ATOM 3 OP1 A A 557 0.738 93.756 114.803 1.00 56.19 O
ATOM 4 OP2 A A 557 0.156 92.270 112.793 1.00 53.65 O
ATOM 5 O5' A A 557 -1.541 93.786 113.773 1.00 58.66 O
ATOM 6 C5' A A 557 -2.040 94.169 115.064 1.00 59.39 C
ATOM 7 C4' A A 557 -1.903 95.657 115.248 1.00 61.15 C
ATOM 8 O4' A A 557 -2.376 96.347 114.064 1.00 61.67 O
ATOM 9 C3' A A 557 -2.732 96.220 116.381 1.00 62.62 C
ATOM 10 O3' A A 557 -2.088 96.063 117.631 1.00 65.35 O
ATOM 11 C2' A A 557 -2.940 97.661 115.944 1.00 62.32 C
ATOM 12 O2' A A 557 -1.815 98.483 116.154 1.00 62.28 O
ATOM 13 C1' A A 557 -3.155 97.469 114.443 1.00 62.46 C
ATOM 14 N9 A A 557 -4.552 97.164 114.130 1.00 62.93 N
ATOM 15 C8 A A 557 -5.053 96.039 113.515 1.00 63.16 C
ATOM 16 N7 A A 557 -6.358 96.038 113.398 1.00 63.67 N
ATOM 17 C5 A A 557 -6.744 97.244 113.967 1.00 62.76 C
ATOM 18 C6 A A 557 -8.001 97.837 114.152 1.00 62.21 C
ATOM 19 N6 A A 557 -9.144 97.269 113.768 1.00 61.86 N
ATOM 20 N1 A A 557 -8.044 99.049 114.750 1.00 62.01 N
ATOM 21 C2 A A 557 -6.891 99.617 115.130 1.00 61.84 C
ATOM 22 N3 A A 557 -5.647 99.158 115.011 1.00 62.33 N
ATOM 23 C4 A A 557 -5.643 97.951 114.414 1.00 62.57 C
ATOM 24 P C A 558 -2.957 95.687 118.930 1.00 67.25 P
ATOM 25 OP1 C A 558 -1.994 95.267 119.984 1.00 67.34 O
ATOM 26 OP2 C A 558 -4.059 94.767 118.532 1.00 63.72 O
ATOM 27 O5' C A 558 -3.569 97.089 119.366 1.00 66.62 O
TER
ATOM 1 O3' G B 576 -7.813 90.291 106.952 1.00 65.56 O
ATOM 2 P U B 577 -8.172 91.317 105.760 1.00 68.00 P
ATOM 3 OP1 U B 577 -8.734 90.553 104.611 1.00 65.85 O
ATOM 4 OP2 U B 577 -7.006 92.215 105.542 1.00 67.10 O
ATOM 5 O5' U B 577 -9.306 92.240 106.398 1.00 67.73 O
ATOM 6 C5' U B 577 -10.580 91.694 106.823 1.00 67.74 C
ATOM 7 C4' U B 577 -11.074 92.423 108.052 1.00 67.58 C
ATOM 8 O4' U B 577 -10.382 91.937 109.228 1.00 67.72 O
ATOM 9 C3' U B 577 -10.818 93.922 108.049 1.00 68.68 C
ATOM 10 O3' U B 577 -11.813 94.632 107.317 1.00 69.63 O
ATOM 11 C2' U B 577 -10.807 94.268 109.534 1.00 69.09 C
ATOM 12 O2' U B 577 -12.092 94.481 110.084 1.00 69.85 O
ATOM 13 C1' U B 577 -10.174 93.008 110.140 1.00 68.63 C
ATOM 14 N1 U B 577 -8.731 93.121 110.417 1.00 69.12 N
ATOM 15 C2 U B 577 -8.316 94.049 111.371 1.00 70.25 C
ATOM 16 O2 U B 577 -9.089 94.765 111.993 1.00 68.88 O
ATOM 17 N3 U B 577 -6.960 94.105 111.569 1.00 70.19 N
ATOM 18 C4 U B 577 -5.996 93.355 110.935 1.00 70.29 C
ATOM 19 O4 U B 577 -4.813 93.535 111.220 1.00 72.53 O
ATOM 20 C5 U B 577 -6.496 92.415 109.979 1.00 69.81 C
ATOM 21 C6 U B 577 -7.811 92.334 109.755 1.00 69.64 C
ATOM 22 P A B 578 -11.400 95.927 106.461 1.00 70.09 P
ATOM 23 OP1 A B 578 -12.596 96.399 105.727 1.00 71.99 O
ATOM 24 OP2 A B 578 -10.168 95.605 105.705 1.00 72.47 O
ATOM 25 O5' A B 578 -11.049 97.013 107.567 1.00 69.18 O
TER
Atoms:
OP1: (0.738,93.756,114.803)
OP2: (0.156,92.270,112.793)
C3': (-2.732,96.220,116.381)
C1': (-3.155,97.469,114.443)
C5': (-2.040,94.169,115.064)
O4': (-2.376,96.347,114.064)
C8: (-5.053,96.039,113.515)
O2': (-1.815,98.483,116.154)
C6: (-8.001,97.837,114.152)
C5: (-6.744,97.244,113.967)
C4: (-5.643,97.951,114.414)
P: (0.014,93.557,113.526)
C4': (-1.903,95.657,115.248)
C2': (-2.940,97.661,115.944)
C2: (-6.891,99.617,115.130)
N1: (-8.044,99.049,114.750)
N3: (-5.647,99.158,115.011)
N6: (-9.144,97.269,113.768)
N7: (-6.358,96.038,113.398)
N9: (-4.552,97.164,114.130)
O5': (-1.541,93.786,113.773)
O3': (-2.088,96.063,117.631)
OP2: (0.156,92.270,112.793)
C3': (-2.732,96.220,116.381)
C1': (-3.155,97.469,114.443)
C5': (-2.040,94.169,115.064)
O4': (-2.376,96.347,114.064)
C8: (-5.053,96.039,113.515)
O2': (-1.815,98.483,116.154)
C6: (-8.001,97.837,114.152)
C5: (-6.744,97.244,113.967)
C4: (-5.643,97.951,114.414)
P: (0.014,93.557,113.526)
C4': (-1.903,95.657,115.248)
C2': (-2.940,97.661,115.944)
C2: (-6.891,99.617,115.130)
N1: (-8.044,99.049,114.750)
N3: (-5.647,99.158,115.011)
N6: (-9.144,97.269,113.768)
N7: (-6.358,96.038,113.398)
N9: (-4.552,97.164,114.130)
O5': (-1.541,93.786,113.773)
O3': (-2.088,96.063,117.631)
C4: (-5.996,93.355,110.935)
N3: (-6.960,94.105,111.569)
OP1: (-8.734,90.553,104.611)
OP2: (-7.006,92.215,105.542)
C2: (-8.316,94.049,111.371)
C1': (-10.174,93.008,110.140)
C3': (-10.818,93.922,108.049)
O5': (-9.306,92.240,106.398)
O4': (-10.382,91.937,109.228)
C5': (-10.580,91.694,106.823)
P: (-8.172,91.317,105.760)
C4': (-11.074,92.423,108.052)
C2': (-10.807,94.268,109.534)
O2': (-12.092,94.481,110.084)
N1: (-8.731,93.121,110.417)
O4: (-4.813,93.535,111.220)
O2: (-9.089,94.765,111.993)
C6: (-7.811,92.334,109.755)
C5: (-6.496,92.415,109.979)
O3': (-11.813,94.632,107.317)
N3: (-6.960,94.105,111.569)
OP1: (-8.734,90.553,104.611)
OP2: (-7.006,92.215,105.542)
C2: (-8.316,94.049,111.371)
C1': (-10.174,93.008,110.140)
C3': (-10.818,93.922,108.049)
O5': (-9.306,92.240,106.398)
O4': (-10.382,91.937,109.228)
C5': (-10.580,91.694,106.823)
P: (-8.172,91.317,105.760)
C4': (-11.074,92.423,108.052)
C2': (-10.807,94.268,109.534)
O2': (-12.092,94.481,110.084)
N1: (-8.731,93.121,110.417)
O4: (-4.813,93.535,111.220)
O2: (-9.089,94.765,111.993)
C6: (-7.811,92.334,109.755)
C5: (-6.496,92.415,109.979)
O3': (-11.813,94.632,107.317)
Image (generated by PyMOL):