ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0899:01252

Extra

PDB:
ATOM 1 O3' G A 898 35.314 90.303 83.380 1.00 27.32 O
ATOM 2 P A A 899 35.468 90.624 84.949 1.00 27.93 P
ATOM 3 OP1 A A 899 35.912 89.391 85.641 1.00 24.46 O
ATOM 4 OP2 A A 899 34.239 91.314 85.409 1.00 27.27 O
ATOM 5 O5' A A 899 36.665 91.676 84.986 1.00 28.07 O
ATOM 6 C5' A A 899 38.016 91.252 85.234 1.00 27.06 C
ATOM 7 C4' A A 899 38.715 90.928 83.937 1.00 27.16 C
ATOM 8 O4' A A 899 38.602 92.051 83.026 1.00 27.89 O
ATOM 9 C3' A A 899 40.208 90.717 84.097 1.00 28.12 C
ATOM 10 O3' A A 899 40.536 89.402 84.513 1.00 25.95 O
ATOM 11 C2' A A 899 40.753 91.087 82.726 1.00 29.24 C
ATOM 12 O2' A A 899 40.639 90.052 81.776 1.00 28.66 O
ATOM 13 C1' A A 899 39.836 92.254 82.350 1.00 29.78 C
ATOM 14 N9 A A 899 40.358 93.566 82.748 1.00 30.46 N
ATOM 15 C8 A A 899 39.706 94.532 83.472 1.00 30.90 C
ATOM 16 N7 A A 899 40.412 95.615 83.669 1.00 31.83 N
ATOM 17 C5 A A 899 41.614 95.350 83.033 1.00 32.40 C
ATOM 18 C6 A A 899 42.786 96.113 82.868 1.00 32.33 C
ATOM 19 N6 A A 899 42.938 97.346 83.347 1.00 32.64 N
ATOM 20 N1 A A 899 43.808 95.558 82.184 1.00 32.72 N
ATOM 21 C2 A A 899 43.654 94.320 81.701 1.00 35.36 C
ATOM 22 N3 A A 899 42.600 93.504 81.783 1.00 35.58 N
ATOM 23 C4 A A 899 41.601 94.087 82.469 1.00 32.49 C
ATOM 24 P A A 900 41.640 89.198 85.654 1.00 27.74 P
ATOM 25 OP1 A A 900 41.855 87.754 85.863 1.00 26.13 O
ATOM 26 OP2 A A 900 41.275 90.066 86.810 1.00 26.57 O
ATOM 27 O5' A A 900 42.964 89.771 84.991 1.00 27.70 O
TER

ATOM 1 O3' G B1251 32.263 101.407 84.443 1.00 30.33 O
ATOM 2 P U B1252 33.197 101.425 83.129 1.00 28.65 P
ATOM 3 OP1 U B1252 32.867 102.696 82.426 1.00 30.16 O
ATOM 4 OP2 U B1252 33.109 100.146 82.394 1.00 27.83 O
ATOM 5 O5' U B1252 34.667 101.548 83.722 1.00 26.01 O
ATOM 6 C5' U B1252 35.163 102.807 84.208 1.00 23.13 C
ATOM 7 C4' U B1252 36.655 102.738 84.346 1.00 22.00 C
ATOM 8 O4' U B1252 36.963 101.691 85.288 1.00 22.47 O
ATOM 9 C3' U B1252 37.366 102.315 83.074 1.00 23.89 C
ATOM 10 O3' U B1252 37.615 103.432 82.233 1.00 23.45 O
ATOM 11 C2' U B1252 38.640 101.650 83.586 1.00 24.40 C
ATOM 12 O2' U B1252 39.702 102.541 83.868 1.00 24.62 O
ATOM 13 C1' U B1252 38.142 101.018 84.888 1.00 24.34 C
ATOM 14 N1 U B1252 37.873 99.573 84.848 1.00 24.66 N
ATOM 15 C2 U B1252 38.947 98.725 84.625 1.00 26.65 C
ATOM 16 O2 U B1252 40.078 99.124 84.399 1.00 26.79 O
ATOM 17 N3 U B1252 38.644 97.388 84.671 1.00 27.33 N
ATOM 18 C4 U B1252 37.412 96.824 84.895 1.00 26.53 C
ATOM 19 O4 U B1252 37.315 95.604 84.932 1.00 28.08 O
ATOM 20 C5 U B1252 36.346 97.760 85.085 1.00 25.74 C
ATOM 21 C6 U B1252 36.605 99.070 85.052 1.00 24.71 C
ATOM 22 P A B1253 37.592 103.248 80.644 1.00 23.55 P
ATOM 23 OP1 A B1253 37.966 104.568 80.085 1.00 20.73 O
ATOM 24 OP2 A B1253 36.303 102.610 80.254 1.00 22.76 O
ATOM 25 O5' A B1253 38.781 102.231 80.361 1.00 21.71 O
TER

Atoms:
OP1: (35.912,89.391,85.641)
OP2: (34.239,91.314,85.409)
C3': (40.208,90.717,84.097)
C1': (39.836,92.254,82.350)
C5': (38.016,91.252,85.234)
O4': (38.602,92.051,83.026)
C8: (39.706,94.532,83.472)
O2': (40.639,90.052,81.776)
C6: (42.786,96.113,82.868)
C5: (41.614,95.350,83.033)
C4: (41.601,94.087,82.469)
P: (35.468,90.624,84.949)
C4': (38.715,90.928,83.937)
C2': (40.753,91.087,82.726)
C2: (43.654,94.320,81.701)
N1: (43.808,95.558,82.184)
N3: (42.600,93.504,81.783)
N6: (42.938,97.346,83.347)
N7: (40.412,95.615,83.669)
N9: (40.358,93.566,82.748)
O5': (36.665,91.676,84.986)
O3': (40.536,89.402,84.513)
C4: (37.412,96.824,84.895)
N3: (38.644,97.388,84.671)
OP1: (32.867,102.696,82.426)
OP2: (33.109,100.146,82.394)
C2: (38.947,98.725,84.625)
C1': (38.142,101.018,84.888)
C3': (37.366,102.315,83.074)
O5': (34.667,101.548,83.722)
O4': (36.963,101.691,85.288)
C5': (35.163,102.807,84.208)
P: (33.197,101.425,83.129)
C4': (36.655,102.738,84.346)
C2': (38.640,101.650,83.586)
O2': (39.702,102.541,83.868)
N1: (37.873,99.573,84.848)
O4: (37.315,95.604,84.932)
O2: (40.078,99.124,84.399)
C6: (36.605,99.070,85.052)
C5: (36.346,97.760,85.085)
O3': (37.615,103.432,82.233)
Image (generated by PyMOL):
PyMOL image
show in jmol