Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B43:B38
Extra
PDB:
ATOM 1 O3' G A 42 84.410 17.620 96.583 1.00 82.74 O
ATOM 2 P A A 43 84.376 17.223 98.123 1.00 82.50 P
ATOM 3 OP1 A A 43 85.764 16.864 98.527 1.00 82.76 O
ATOM 4 OP2 A A 43 83.282 16.242 98.301 1.00 82.31 O
ATOM 5 O5' A A 43 83.982 18.581 98.846 1.00 82.66 O
ATOM 6 C5' A A 43 83.695 18.611 100.250 1.00 82.65 C
ATOM 7 C4' A A 43 83.281 20.001 100.648 1.00 82.64 C
ATOM 8 O4' A A 43 84.434 20.872 100.564 1.00 83.13 O
ATOM 9 C3' A A 43 82.264 20.632 99.711 1.00 82.59 C
ATOM 10 O3' A A 43 80.944 20.242 100.035 1.00 81.94 O
ATOM 11 C2' A A 43 82.529 22.116 99.891 1.00 82.99 C
ATOM 12 O2' A A 43 81.942 22.645 101.070 1.00 82.77 O
ATOM 13 C1' A A 43 84.057 22.110 99.982 1.00 83.60 C
ATOM 14 N9 A A 43 84.668 22.182 98.653 1.00 83.88 N
ATOM 15 C8 A A 43 85.147 21.161 97.864 1.00 83.93 C
ATOM 16 N7 A A 43 85.607 21.563 96.703 1.00 84.17 N
ATOM 17 C5 A A 43 85.430 22.938 96.735 1.00 84.43 C
ATOM 18 C6 A A 43 85.722 23.949 95.807 1.00 85.18 C
ATOM 19 N6 A A 43 86.297 23.727 94.625 1.00 85.29 N
ATOM 20 N1 A A 43 85.407 25.220 96.142 1.00 85.61 N
ATOM 21 C2 A A 43 84.854 25.449 97.342 1.00 85.41 C
ATOM 22 N3 A A 43 84.546 24.584 98.302 1.00 84.53 N
ATOM 23 C4 A A 43 84.858 23.332 97.930 1.00 84.30 C
ATOM 24 P A A 44 79.899 19.903 98.858 1.00 81.77 P
ATOM 25 OP1 A A 44 78.616 19.613 99.547 1.00 82.34 O
ATOM 26 OP2 A A 44 80.461 18.912 97.895 1.00 80.77 O
ATOM 27 O5' A A 44 79.759 21.272 98.058 1.00 81.67 O
TER
ATOM 1 O3' A B 37 85.642 25.353 87.472 1.00 81.76 O
ATOM 2 P U B 38 87.148 25.840 87.165 1.00 83.29 P
ATOM 3 OP1 U B 38 87.060 27.116 86.401 1.00 82.75 O
ATOM 4 OP2 U B 38 87.957 24.716 86.613 1.00 83.17 O
ATOM 5 O5' U B 38 87.688 26.193 88.621 1.00 83.63 O
ATOM 6 C5' U B 38 86.847 26.920 89.530 1.00 86.07 C
ATOM 7 C4' U B 38 87.082 26.477 90.945 1.00 87.43 C
ATOM 8 O4' U B 38 86.934 25.042 91.043 1.00 88.19 O
ATOM 9 C3' U B 38 88.448 26.792 91.521 1.00 88.44 C
ATOM 10 O3' U B 38 88.315 28.167 91.939 1.00 88.33 O
ATOM 11 C2' U B 38 88.571 25.744 92.638 1.00 89.59 C
ATOM 12 O2' U B 38 87.924 26.125 93.837 1.00 91.73 O
ATOM 13 C1' U B 38 87.767 24.558 92.073 1.00 88.89 C
ATOM 14 N1 U B 38 88.439 23.327 91.605 1.00 88.50 N
ATOM 15 C2 U B 38 88.800 22.367 92.551 1.00 88.23 C
ATOM 16 O2 U B 38 88.657 22.527 93.756 1.00 89.07 O
ATOM 17 N3 U B 38 89.335 21.210 92.033 1.00 87.18 N
ATOM 18 C4 U B 38 89.548 20.911 90.708 1.00 86.71 C
ATOM 19 O4 U B 38 89.921 19.780 90.403 1.00 85.97 O
ATOM 20 C5 U B 38 89.193 21.955 89.795 1.00 86.94 C
ATOM 21 C6 U B 38 88.671 23.102 90.260 1.00 87.83 C
ATOM 22 P C B 39 89.409 28.879 92.882 1.00 88.89 P
ATOM 23 OP1 C B 39 89.664 28.018 94.055 1.00 89.67 O
ATOM 24 OP2 C B 39 88.943 30.272 93.087 1.00 88.93 O
ATOM 25 O5' C B 39 90.726 28.950 92.001 1.00 88.43 O
TER
ATOM 2 P A A 43 84.376 17.223 98.123 1.00 82.50 P
ATOM 3 OP1 A A 43 85.764 16.864 98.527 1.00 82.76 O
ATOM 4 OP2 A A 43 83.282 16.242 98.301 1.00 82.31 O
ATOM 5 O5' A A 43 83.982 18.581 98.846 1.00 82.66 O
ATOM 6 C5' A A 43 83.695 18.611 100.250 1.00 82.65 C
ATOM 7 C4' A A 43 83.281 20.001 100.648 1.00 82.64 C
ATOM 8 O4' A A 43 84.434 20.872 100.564 1.00 83.13 O
ATOM 9 C3' A A 43 82.264 20.632 99.711 1.00 82.59 C
ATOM 10 O3' A A 43 80.944 20.242 100.035 1.00 81.94 O
ATOM 11 C2' A A 43 82.529 22.116 99.891 1.00 82.99 C
ATOM 12 O2' A A 43 81.942 22.645 101.070 1.00 82.77 O
ATOM 13 C1' A A 43 84.057 22.110 99.982 1.00 83.60 C
ATOM 14 N9 A A 43 84.668 22.182 98.653 1.00 83.88 N
ATOM 15 C8 A A 43 85.147 21.161 97.864 1.00 83.93 C
ATOM 16 N7 A A 43 85.607 21.563 96.703 1.00 84.17 N
ATOM 17 C5 A A 43 85.430 22.938 96.735 1.00 84.43 C
ATOM 18 C6 A A 43 85.722 23.949 95.807 1.00 85.18 C
ATOM 19 N6 A A 43 86.297 23.727 94.625 1.00 85.29 N
ATOM 20 N1 A A 43 85.407 25.220 96.142 1.00 85.61 N
ATOM 21 C2 A A 43 84.854 25.449 97.342 1.00 85.41 C
ATOM 22 N3 A A 43 84.546 24.584 98.302 1.00 84.53 N
ATOM 23 C4 A A 43 84.858 23.332 97.930 1.00 84.30 C
ATOM 24 P A A 44 79.899 19.903 98.858 1.00 81.77 P
ATOM 25 OP1 A A 44 78.616 19.613 99.547 1.00 82.34 O
ATOM 26 OP2 A A 44 80.461 18.912 97.895 1.00 80.77 O
ATOM 27 O5' A A 44 79.759 21.272 98.058 1.00 81.67 O
TER
ATOM 1 O3' A B 37 85.642 25.353 87.472 1.00 81.76 O
ATOM 2 P U B 38 87.148 25.840 87.165 1.00 83.29 P
ATOM 3 OP1 U B 38 87.060 27.116 86.401 1.00 82.75 O
ATOM 4 OP2 U B 38 87.957 24.716 86.613 1.00 83.17 O
ATOM 5 O5' U B 38 87.688 26.193 88.621 1.00 83.63 O
ATOM 6 C5' U B 38 86.847 26.920 89.530 1.00 86.07 C
ATOM 7 C4' U B 38 87.082 26.477 90.945 1.00 87.43 C
ATOM 8 O4' U B 38 86.934 25.042 91.043 1.00 88.19 O
ATOM 9 C3' U B 38 88.448 26.792 91.521 1.00 88.44 C
ATOM 10 O3' U B 38 88.315 28.167 91.939 1.00 88.33 O
ATOM 11 C2' U B 38 88.571 25.744 92.638 1.00 89.59 C
ATOM 12 O2' U B 38 87.924 26.125 93.837 1.00 91.73 O
ATOM 13 C1' U B 38 87.767 24.558 92.073 1.00 88.89 C
ATOM 14 N1 U B 38 88.439 23.327 91.605 1.00 88.50 N
ATOM 15 C2 U B 38 88.800 22.367 92.551 1.00 88.23 C
ATOM 16 O2 U B 38 88.657 22.527 93.756 1.00 89.07 O
ATOM 17 N3 U B 38 89.335 21.210 92.033 1.00 87.18 N
ATOM 18 C4 U B 38 89.548 20.911 90.708 1.00 86.71 C
ATOM 19 O4 U B 38 89.921 19.780 90.403 1.00 85.97 O
ATOM 20 C5 U B 38 89.193 21.955 89.795 1.00 86.94 C
ATOM 21 C6 U B 38 88.671 23.102 90.260 1.00 87.83 C
ATOM 22 P C B 39 89.409 28.879 92.882 1.00 88.89 P
ATOM 23 OP1 C B 39 89.664 28.018 94.055 1.00 89.67 O
ATOM 24 OP2 C B 39 88.943 30.272 93.087 1.00 88.93 O
ATOM 25 O5' C B 39 90.726 28.950 92.001 1.00 88.43 O
TER
Atoms:
OP1: (85.764,16.864,98.527)
OP2: (83.282,16.242,98.301)
C3': (82.264,20.632,99.711)
C1': (84.057,22.110,99.982)
C5': (83.695,18.611,100.250)
O4': (84.434,20.872,100.564)
C8: (85.147,21.161,97.864)
O2': (81.942,22.645,101.070)
C6: (85.722,23.949,95.807)
C5: (85.430,22.938,96.735)
C4: (84.858,23.332,97.930)
P: (84.376,17.223,98.123)
C4': (83.281,20.001,100.648)
C2': (82.529,22.116,99.891)
C2: (84.854,25.449,97.342)
N1: (85.407,25.220,96.142)
N3: (84.546,24.584,98.302)
N6: (86.297,23.727,94.625)
N7: (85.607,21.563,96.703)
N9: (84.668,22.182,98.653)
O5': (83.982,18.581,98.846)
O3': (80.944,20.242,100.035)
OP2: (83.282,16.242,98.301)
C3': (82.264,20.632,99.711)
C1': (84.057,22.110,99.982)
C5': (83.695,18.611,100.250)
O4': (84.434,20.872,100.564)
C8: (85.147,21.161,97.864)
O2': (81.942,22.645,101.070)
C6: (85.722,23.949,95.807)
C5: (85.430,22.938,96.735)
C4: (84.858,23.332,97.930)
P: (84.376,17.223,98.123)
C4': (83.281,20.001,100.648)
C2': (82.529,22.116,99.891)
C2: (84.854,25.449,97.342)
N1: (85.407,25.220,96.142)
N3: (84.546,24.584,98.302)
N6: (86.297,23.727,94.625)
N7: (85.607,21.563,96.703)
N9: (84.668,22.182,98.653)
O5': (83.982,18.581,98.846)
O3': (80.944,20.242,100.035)
C4: (89.548,20.911,90.708)
N3: (89.335,21.210,92.033)
OP1: (87.060,27.116,86.401)
OP2: (87.957,24.716,86.613)
C2: (88.800,22.367,92.551)
C1': (87.767,24.558,92.073)
C3': (88.448,26.792,91.521)
O5': (87.688,26.193,88.621)
O4': (86.934,25.042,91.043)
C5': (86.847,26.920,89.530)
P: (87.148,25.840,87.165)
C4': (87.082,26.477,90.945)
C2': (88.571,25.744,92.638)
O2': (87.924,26.125,93.837)
N1: (88.439,23.327,91.605)
O4: (89.921,19.780,90.403)
O2: (88.657,22.527,93.756)
C6: (88.671,23.102,90.260)
C5: (89.193,21.955,89.795)
O3': (88.315,28.167,91.939)
N3: (89.335,21.210,92.033)
OP1: (87.060,27.116,86.401)
OP2: (87.957,24.716,86.613)
C2: (88.800,22.367,92.551)
C1': (87.767,24.558,92.073)
C3': (88.448,26.792,91.521)
O5': (87.688,26.193,88.621)
O4': (86.934,25.042,91.043)
C5': (86.847,26.920,89.530)
P: (87.148,25.840,87.165)
C4': (87.082,26.477,90.945)
C2': (88.571,25.744,92.638)
O2': (87.924,26.125,93.837)
N1: (88.439,23.327,91.605)
O4: (89.921,19.780,90.403)
O2: (88.657,22.527,93.756)
C6: (88.671,23.102,90.260)
C5: (89.193,21.955,89.795)
O3': (88.315,28.167,91.939)
Image (generated by PyMOL):