Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A516:A517
Extra
PDB:
ATOM 1 O3' C A 515 -53.461 -90.825 8.439 1.00 0.01 O
ATOM 2 P C A 516 -53.438 -91.948 7.330 1.00 0.01 P
ATOM 3 OP1 C A 516 -53.666 -91.274 6.040 1.00 0.01 O
ATOM 4 OP2 C A 516 -54.360 -93.023 7.756 1.00 0.01 O
ATOM 5 O5' C A 516 -51.957 -92.458 7.419 1.00 0.01 O
ATOM 6 C5' C A 516 -50.889 -91.599 7.104 1.00 0.01 C
ATOM 7 C4' C A 516 -49.579 -92.318 7.150 1.00 0.01 C
ATOM 8 O4' C A 516 -49.323 -92.776 8.487 1.00 0.01 O
ATOM 9 C3' C A 516 -49.478 -93.566 6.319 1.00 0.01 C
ATOM 10 O3' C A 516 -49.247 -93.278 4.961 1.00 0.01 O
ATOM 11 C2' C A 516 -48.331 -94.287 6.986 1.00 0.01 C
ATOM 12 O2' C A 516 -47.100 -93.716 6.607 1.00 0.01 O
ATOM 13 C1' C A 516 -48.573 -93.951 8.440 1.00 0.01 C
ATOM 14 N1 C A 516 -49.317 -94.973 9.110 1.00 0.01 N
ATOM 15 C2 C A 516 -48.654 -96.123 9.482 1.00 0.01 C
ATOM 16 O2 C A 516 -47.450 -96.192 9.176 1.00 0.01 O
ATOM 17 N3 C A 516 -49.359 -97.081 10.117 1.00 0.01 N
ATOM 18 C4 C A 516 -50.633 -96.881 10.374 1.00 0.01 C
ATOM 19 N4 C A 516 -51.336 -97.785 11.012 1.00 0.01 N
ATOM 20 C5 C A 516 -51.301 -95.717 10.009 1.00 0.01 C
ATOM 21 C6 C A 516 -50.618 -94.778 9.372 1.00 0.01 C
ATOM 22 P G A 517 -49.217 -94.433 3.868 1.00 0.01 P
ATOM 23 OP1 G A 517 -48.672 -93.843 2.656 1.00 0.01 O
ATOM 24 OP2 G A 517 -50.545 -95.029 3.836 1.00 0.01 O
ATOM 25 O5' G A 517 -48.197 -95.457 4.455 1.00 0.01 O
TER
ATOM 1 O3' C B 516 -49.247 -93.278 4.961 1.00 0.01 O
ATOM 2 P G B 517 -49.217 -94.433 3.868 1.00 0.01 P
ATOM 3 OP1 G B 517 -48.672 -93.843 2.656 1.00 0.01 O
ATOM 4 OP2 G B 517 -50.545 -95.029 3.836 1.00 0.01 O
ATOM 5 O5' G B 517 -48.197 -95.457 4.455 1.00 0.01 O
ATOM 6 C5' G B 517 -47.685 -96.494 3.666 1.00 0.01 C
ATOM 7 C4' G B 517 -46.520 -97.108 4.344 1.00 0.01 C
ATOM 8 O4' G B 517 -46.768 -97.100 5.747 1.00 0.01 O
ATOM 9 C3' G B 517 -46.224 -98.555 4.016 1.00 0.01 C
ATOM 10 O3' G B 517 -45.449 -98.694 2.855 1.00 0.01 O
ATOM 11 C2' G B 517 -45.498 -99.016 5.255 1.00 0.01 C
ATOM 12 O2' G B 517 -44.140 -98.588 5.228 1.00 0.01 O
ATOM 13 C1' G B 517 -46.224 -98.237 6.334 1.00 0.01 C
ATOM 14 N9 G B 517 -47.317 -98.979 6.928 1.00 0.01 N
ATOM 15 C8 G B 517 -48.551 -98.470 6.970 1.00 0.01 C
ATOM 16 N7 G B 517 -49.366 -99.267 7.571 1.00 0.01 N
ATOM 17 C5 G B 517 -48.606-100.355 7.948 1.00 0.01 C
ATOM 18 C6 G B 517 -48.970-101.530 8.644 1.00 0.01 C
ATOM 19 O6 G B 517 -50.104-101.831 9.067 1.00 0.01 O
ATOM 20 N1 G B 517 -47.856-102.356 8.811 1.00 0.01 N
ATOM 21 C2 G B 517 -46.604-102.071 8.342 1.00 0.01 C
ATOM 22 N2 G B 517 -45.609-102.923 8.527 1.00 0.01 N
ATOM 23 N3 G B 517 -46.293-100.980 7.714 1.00 0.01 N
ATOM 24 C4 G B 517 -47.326-100.171 7.557 1.00 0.01 C
ATOM 25 P U B 518 -45.950 -99.602 1.656 1.00 0.01 P
ATOM 26 OP1 U B 518 -45.199 -99.185 0.463 1.00 0.01 O
ATOM 27 OP2 U B 518 -47.406 -99.530 1.629 1.00 0.01 O
ATOM 28 O5' U B 518 -45.486-101.031 2.113 1.00 0.01 O
TER
ATOM 2 P C A 516 -53.438 -91.948 7.330 1.00 0.01 P
ATOM 3 OP1 C A 516 -53.666 -91.274 6.040 1.00 0.01 O
ATOM 4 OP2 C A 516 -54.360 -93.023 7.756 1.00 0.01 O
ATOM 5 O5' C A 516 -51.957 -92.458 7.419 1.00 0.01 O
ATOM 6 C5' C A 516 -50.889 -91.599 7.104 1.00 0.01 C
ATOM 7 C4' C A 516 -49.579 -92.318 7.150 1.00 0.01 C
ATOM 8 O4' C A 516 -49.323 -92.776 8.487 1.00 0.01 O
ATOM 9 C3' C A 516 -49.478 -93.566 6.319 1.00 0.01 C
ATOM 10 O3' C A 516 -49.247 -93.278 4.961 1.00 0.01 O
ATOM 11 C2' C A 516 -48.331 -94.287 6.986 1.00 0.01 C
ATOM 12 O2' C A 516 -47.100 -93.716 6.607 1.00 0.01 O
ATOM 13 C1' C A 516 -48.573 -93.951 8.440 1.00 0.01 C
ATOM 14 N1 C A 516 -49.317 -94.973 9.110 1.00 0.01 N
ATOM 15 C2 C A 516 -48.654 -96.123 9.482 1.00 0.01 C
ATOM 16 O2 C A 516 -47.450 -96.192 9.176 1.00 0.01 O
ATOM 17 N3 C A 516 -49.359 -97.081 10.117 1.00 0.01 N
ATOM 18 C4 C A 516 -50.633 -96.881 10.374 1.00 0.01 C
ATOM 19 N4 C A 516 -51.336 -97.785 11.012 1.00 0.01 N
ATOM 20 C5 C A 516 -51.301 -95.717 10.009 1.00 0.01 C
ATOM 21 C6 C A 516 -50.618 -94.778 9.372 1.00 0.01 C
ATOM 22 P G A 517 -49.217 -94.433 3.868 1.00 0.01 P
ATOM 23 OP1 G A 517 -48.672 -93.843 2.656 1.00 0.01 O
ATOM 24 OP2 G A 517 -50.545 -95.029 3.836 1.00 0.01 O
ATOM 25 O5' G A 517 -48.197 -95.457 4.455 1.00 0.01 O
TER
ATOM 1 O3' C B 516 -49.247 -93.278 4.961 1.00 0.01 O
ATOM 2 P G B 517 -49.217 -94.433 3.868 1.00 0.01 P
ATOM 3 OP1 G B 517 -48.672 -93.843 2.656 1.00 0.01 O
ATOM 4 OP2 G B 517 -50.545 -95.029 3.836 1.00 0.01 O
ATOM 5 O5' G B 517 -48.197 -95.457 4.455 1.00 0.01 O
ATOM 6 C5' G B 517 -47.685 -96.494 3.666 1.00 0.01 C
ATOM 7 C4' G B 517 -46.520 -97.108 4.344 1.00 0.01 C
ATOM 8 O4' G B 517 -46.768 -97.100 5.747 1.00 0.01 O
ATOM 9 C3' G B 517 -46.224 -98.555 4.016 1.00 0.01 C
ATOM 10 O3' G B 517 -45.449 -98.694 2.855 1.00 0.01 O
ATOM 11 C2' G B 517 -45.498 -99.016 5.255 1.00 0.01 C
ATOM 12 O2' G B 517 -44.140 -98.588 5.228 1.00 0.01 O
ATOM 13 C1' G B 517 -46.224 -98.237 6.334 1.00 0.01 C
ATOM 14 N9 G B 517 -47.317 -98.979 6.928 1.00 0.01 N
ATOM 15 C8 G B 517 -48.551 -98.470 6.970 1.00 0.01 C
ATOM 16 N7 G B 517 -49.366 -99.267 7.571 1.00 0.01 N
ATOM 17 C5 G B 517 -48.606-100.355 7.948 1.00 0.01 C
ATOM 18 C6 G B 517 -48.970-101.530 8.644 1.00 0.01 C
ATOM 19 O6 G B 517 -50.104-101.831 9.067 1.00 0.01 O
ATOM 20 N1 G B 517 -47.856-102.356 8.811 1.00 0.01 N
ATOM 21 C2 G B 517 -46.604-102.071 8.342 1.00 0.01 C
ATOM 22 N2 G B 517 -45.609-102.923 8.527 1.00 0.01 N
ATOM 23 N3 G B 517 -46.293-100.980 7.714 1.00 0.01 N
ATOM 24 C4 G B 517 -47.326-100.171 7.557 1.00 0.01 C
ATOM 25 P U B 518 -45.950 -99.602 1.656 1.00 0.01 P
ATOM 26 OP1 U B 518 -45.199 -99.185 0.463 1.00 0.01 O
ATOM 27 OP2 U B 518 -47.406 -99.530 1.629 1.00 0.01 O
ATOM 28 O5' U B 518 -45.486-101.031 2.113 1.00 0.01 O
TER
Atoms:
C2: (-48.654,-96.123,9.482)
OP1: (-53.666,-91.274,6.040)
OP2: (-54.360,-93.023,7.756)
C4: (-50.633,-96.881,10.374)
O5': (-51.957,-92.458,7.419)
C3': (-49.478,-93.566,6.319)
C1': (-48.573,-93.951,8.440)
O4': (-49.323,-92.776,8.487)
C5': (-50.889,-91.599,7.104)
P: (-53.438,-91.948,7.330)
O2: (-47.450,-96.192,9.176)
C4': (-49.579,-92.318,7.150)
C2': (-48.331,-94.287,6.986)
O2': (-47.100,-93.716,6.607)
N1: (-49.317,-94.973,9.110)
N3: (-49.359,-97.081,10.117)
N4: (-51.336,-97.785,11.012)
C6: (-50.618,-94.778,9.372)
C5: (-51.301,-95.717,10.009)
O3': (-49.247,-93.278,4.961)
OP1: (-53.666,-91.274,6.040)
OP2: (-54.360,-93.023,7.756)
C4: (-50.633,-96.881,10.374)
O5': (-51.957,-92.458,7.419)
C3': (-49.478,-93.566,6.319)
C1': (-48.573,-93.951,8.440)
O4': (-49.323,-92.776,8.487)
C5': (-50.889,-91.599,7.104)
P: (-53.438,-91.948,7.330)
O2: (-47.450,-96.192,9.176)
C4': (-49.579,-92.318,7.150)
C2': (-48.331,-94.287,6.986)
O2': (-47.100,-93.716,6.607)
N1: (-49.317,-94.973,9.110)
N3: (-49.359,-97.081,10.117)
N4: (-51.336,-97.785,11.012)
C6: (-50.618,-94.778,9.372)
C5: (-51.301,-95.717,10.009)
O3': (-49.247,-93.278,4.961)
OP1: (-48.672,-93.843,2.656)
OP2: (-50.545,-95.029,3.836)
C3': (-46.224,-98.555,4.016)
C1': (-46.224,-98.237,6.334)
C5': (-47.685,-96.494,3.666)
O6: (-50.104,-101.831,9.067)
O4': (-46.768,-97.100,5.747)
C8: (-48.551,-98.470,6.970)
C2: (-46.604,-102.071,8.342)
C6: (-48.970,-101.530,8.644)
C5: (-48.606,-100.355,7.948)
C4: (-47.326,-100.171,7.557)
P: (-49.217,-94.433,3.868)
C4': (-46.520,-97.108,4.344)
C2': (-45.498,-99.016,5.255)
O2': (-44.140,-98.588,5.228)
N1: (-47.856,-102.356,8.811)
N2: (-45.609,-102.923,8.527)
N3: (-46.293,-100.980,7.714)
N7: (-49.366,-99.267,7.571)
N9: (-47.317,-98.979,6.928)
O5': (-48.197,-95.457,4.455)
O3': (-45.449,-98.694,2.855)
OP2: (-50.545,-95.029,3.836)
C3': (-46.224,-98.555,4.016)
C1': (-46.224,-98.237,6.334)
C5': (-47.685,-96.494,3.666)
O6: (-50.104,-101.831,9.067)
O4': (-46.768,-97.100,5.747)
C8: (-48.551,-98.470,6.970)
C2: (-46.604,-102.071,8.342)
C6: (-48.970,-101.530,8.644)
C5: (-48.606,-100.355,7.948)
C4: (-47.326,-100.171,7.557)
P: (-49.217,-94.433,3.868)
C4': (-46.520,-97.108,4.344)
C2': (-45.498,-99.016,5.255)
O2': (-44.140,-98.588,5.228)
N1: (-47.856,-102.356,8.811)
N2: (-45.609,-102.923,8.527)
N3: (-46.293,-100.980,7.714)
N7: (-49.366,-99.267,7.571)
N9: (-47.317,-98.979,6.928)
O5': (-48.197,-95.457,4.455)
O3': (-45.449,-98.694,2.855)
Image (generated by PyMOL):