Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0289:0290
Extra
PDB:
ATOM 1 O3' U A 288 37.724 138.564 24.000 1.00 65.64 O
ATOM 2 P C A 289 36.146 138.820 24.215 1.00 67.65 P
ATOM 3 OP1 C A 289 36.008 140.075 25.004 1.00 65.52 O
ATOM 4 OP2 C A 289 35.536 137.561 24.727 1.00 66.12 O
ATOM 5 O5' C A 289 35.579 139.079 22.743 1.00 67.70 O
ATOM 6 C5' C A 289 36.027 140.212 21.969 1.00 67.75 C
ATOM 7 C4' C A 289 35.514 140.143 20.545 1.00 66.97 C
ATOM 8 O4' C A 289 35.987 138.937 19.887 1.00 67.15 O
ATOM 9 C3' C A 289 34.012 140.065 20.334 1.00 66.81 C
ATOM 10 O3' C A 289 33.372 141.320 20.504 1.00 66.18 O
ATOM 11 C2' C A 289 33.936 139.606 18.885 1.00 68.10 C
ATOM 12 O2' C A 289 34.173 140.645 17.956 1.00 68.56 O
ATOM 13 C1' C A 289 35.098 138.612 18.825 1.00 68.75 C
ATOM 14 N1 C A 289 34.633 137.218 18.964 1.00 70.46 N
ATOM 15 C2 C A 289 33.995 136.611 17.861 1.00 72.26 C
ATOM 16 O2 C A 289 33.859 137.258 16.804 1.00 73.56 O
ATOM 17 N3 C A 289 33.547 135.342 17.973 1.00 72.11 N
ATOM 18 C4 C A 289 33.717 134.674 19.114 1.00 72.18 C
ATOM 19 N4 C A 289 33.264 133.422 19.172 1.00 72.27 N
ATOM 20 C5 C A 289 34.361 135.260 20.246 1.00 71.52 C
ATOM 21 C6 C A 289 34.800 136.521 20.128 1.00 70.30 C
ATOM 22 P A A 290 31.774 141.385 20.645 1.00 65.46 P
ATOM 23 OP1 A A 290 31.405 142.776 21.009 1.00 65.40 O
ATOM 24 OP2 A A 290 31.338 140.263 21.508 1.00 65.23 O
ATOM 25 O5' A A 290 31.246 141.101 19.171 1.00 66.06 O
TER
ATOM 1 O3' C B 289 33.372 141.320 20.504 1.00 66.18 O
ATOM 2 P A B 290 31.774 141.385 20.645 1.00 65.46 P
ATOM 3 OP1 A B 290 31.405 142.776 21.009 1.00 65.40 O
ATOM 4 OP2 A B 290 31.338 140.263 21.508 1.00 65.23 O
ATOM 5 O5' A B 290 31.246 141.101 19.171 1.00 66.06 O
ATOM 6 C5' A B 290 31.495 142.031 18.100 1.00 67.09 C
ATOM 7 C4' A B 290 30.774 141.587 16.850 1.00 67.98 C
ATOM 8 O4' A B 290 31.300 140.305 16.420 1.00 68.46 O
ATOM 9 C3' A B 290 29.287 141.342 17.024 1.00 68.03 C
ATOM 10 O3' A B 290 28.550 142.542 16.885 1.00 69.38 O
ATOM 11 C2' A B 290 28.979 140.363 15.907 1.00 68.27 C
ATOM 12 O2' A B 290 28.841 141.014 14.663 1.00 68.37 O
ATOM 13 C1' A B 290 30.248 139.507 15.907 1.00 68.97 C
ATOM 14 N9 A B 290 30.153 138.300 16.730 1.00 70.81 N
ATOM 15 C8 A B 290 30.643 138.099 18.002 1.00 71.34 C
ATOM 16 N7 A B 290 30.428 136.892 18.466 1.00 71.02 N
ATOM 17 C5 A B 290 29.747 136.257 17.438 1.00 71.40 C
ATOM 18 C6 A B 290 29.246 134.954 17.302 1.00 71.76 C
ATOM 19 N6 A B 290 29.374 134.011 18.239 1.00 71.96 N
ATOM 20 N1 A B 290 28.608 134.642 16.151 1.00 72.34 N
ATOM 21 C2 A B 290 28.499 135.581 15.205 1.00 72.24 C
ATOM 22 N3 A B 290 28.937 136.836 15.210 1.00 71.98 N
ATOM 23 C4 A B 290 29.560 137.115 16.368 1.00 71.33 C
ATOM 24 P C B 291 27.193 142.731 17.714 1.00 71.43 P
ATOM 25 OP1 C B 291 26.642 144.074 17.376 1.00 70.06 O
ATOM 26 OP2 C B 291 27.495 142.398 19.133 1.00 71.54 O
ATOM 27 O5' C B 291 26.240 141.590 17.135 1.00 70.54 O
TER
ATOM 2 P C A 289 36.146 138.820 24.215 1.00 67.65 P
ATOM 3 OP1 C A 289 36.008 140.075 25.004 1.00 65.52 O
ATOM 4 OP2 C A 289 35.536 137.561 24.727 1.00 66.12 O
ATOM 5 O5' C A 289 35.579 139.079 22.743 1.00 67.70 O
ATOM 6 C5' C A 289 36.027 140.212 21.969 1.00 67.75 C
ATOM 7 C4' C A 289 35.514 140.143 20.545 1.00 66.97 C
ATOM 8 O4' C A 289 35.987 138.937 19.887 1.00 67.15 O
ATOM 9 C3' C A 289 34.012 140.065 20.334 1.00 66.81 C
ATOM 10 O3' C A 289 33.372 141.320 20.504 1.00 66.18 O
ATOM 11 C2' C A 289 33.936 139.606 18.885 1.00 68.10 C
ATOM 12 O2' C A 289 34.173 140.645 17.956 1.00 68.56 O
ATOM 13 C1' C A 289 35.098 138.612 18.825 1.00 68.75 C
ATOM 14 N1 C A 289 34.633 137.218 18.964 1.00 70.46 N
ATOM 15 C2 C A 289 33.995 136.611 17.861 1.00 72.26 C
ATOM 16 O2 C A 289 33.859 137.258 16.804 1.00 73.56 O
ATOM 17 N3 C A 289 33.547 135.342 17.973 1.00 72.11 N
ATOM 18 C4 C A 289 33.717 134.674 19.114 1.00 72.18 C
ATOM 19 N4 C A 289 33.264 133.422 19.172 1.00 72.27 N
ATOM 20 C5 C A 289 34.361 135.260 20.246 1.00 71.52 C
ATOM 21 C6 C A 289 34.800 136.521 20.128 1.00 70.30 C
ATOM 22 P A A 290 31.774 141.385 20.645 1.00 65.46 P
ATOM 23 OP1 A A 290 31.405 142.776 21.009 1.00 65.40 O
ATOM 24 OP2 A A 290 31.338 140.263 21.508 1.00 65.23 O
ATOM 25 O5' A A 290 31.246 141.101 19.171 1.00 66.06 O
TER
ATOM 1 O3' C B 289 33.372 141.320 20.504 1.00 66.18 O
ATOM 2 P A B 290 31.774 141.385 20.645 1.00 65.46 P
ATOM 3 OP1 A B 290 31.405 142.776 21.009 1.00 65.40 O
ATOM 4 OP2 A B 290 31.338 140.263 21.508 1.00 65.23 O
ATOM 5 O5' A B 290 31.246 141.101 19.171 1.00 66.06 O
ATOM 6 C5' A B 290 31.495 142.031 18.100 1.00 67.09 C
ATOM 7 C4' A B 290 30.774 141.587 16.850 1.00 67.98 C
ATOM 8 O4' A B 290 31.300 140.305 16.420 1.00 68.46 O
ATOM 9 C3' A B 290 29.287 141.342 17.024 1.00 68.03 C
ATOM 10 O3' A B 290 28.550 142.542 16.885 1.00 69.38 O
ATOM 11 C2' A B 290 28.979 140.363 15.907 1.00 68.27 C
ATOM 12 O2' A B 290 28.841 141.014 14.663 1.00 68.37 O
ATOM 13 C1' A B 290 30.248 139.507 15.907 1.00 68.97 C
ATOM 14 N9 A B 290 30.153 138.300 16.730 1.00 70.81 N
ATOM 15 C8 A B 290 30.643 138.099 18.002 1.00 71.34 C
ATOM 16 N7 A B 290 30.428 136.892 18.466 1.00 71.02 N
ATOM 17 C5 A B 290 29.747 136.257 17.438 1.00 71.40 C
ATOM 18 C6 A B 290 29.246 134.954 17.302 1.00 71.76 C
ATOM 19 N6 A B 290 29.374 134.011 18.239 1.00 71.96 N
ATOM 20 N1 A B 290 28.608 134.642 16.151 1.00 72.34 N
ATOM 21 C2 A B 290 28.499 135.581 15.205 1.00 72.24 C
ATOM 22 N3 A B 290 28.937 136.836 15.210 1.00 71.98 N
ATOM 23 C4 A B 290 29.560 137.115 16.368 1.00 71.33 C
ATOM 24 P C B 291 27.193 142.731 17.714 1.00 71.43 P
ATOM 25 OP1 C B 291 26.642 144.074 17.376 1.00 70.06 O
ATOM 26 OP2 C B 291 27.495 142.398 19.133 1.00 71.54 O
ATOM 27 O5' C B 291 26.240 141.590 17.135 1.00 70.54 O
TER
Atoms:
C2: (33.995,136.611,17.861)
OP1: (36.008,140.075,25.004)
OP2: (35.536,137.561,24.727)
C4: (33.717,134.674,19.114)
O5': (35.579,139.079,22.743)
C3': (34.012,140.065,20.334)
C1': (35.098,138.612,18.825)
O4': (35.987,138.937,19.887)
C5': (36.027,140.212,21.969)
P: (36.146,138.820,24.215)
O2: (33.859,137.258,16.804)
C4': (35.514,140.143,20.545)
C2': (33.936,139.606,18.885)
O2': (34.173,140.645,17.956)
N1: (34.633,137.218,18.964)
N3: (33.547,135.342,17.973)
N4: (33.264,133.422,19.172)
C6: (34.800,136.521,20.128)
C5: (34.361,135.260,20.246)
O3': (33.372,141.320,20.504)
OP1: (36.008,140.075,25.004)
OP2: (35.536,137.561,24.727)
C4: (33.717,134.674,19.114)
O5': (35.579,139.079,22.743)
C3': (34.012,140.065,20.334)
C1': (35.098,138.612,18.825)
O4': (35.987,138.937,19.887)
C5': (36.027,140.212,21.969)
P: (36.146,138.820,24.215)
O2: (33.859,137.258,16.804)
C4': (35.514,140.143,20.545)
C2': (33.936,139.606,18.885)
O2': (34.173,140.645,17.956)
N1: (34.633,137.218,18.964)
N3: (33.547,135.342,17.973)
N4: (33.264,133.422,19.172)
C6: (34.800,136.521,20.128)
C5: (34.361,135.260,20.246)
O3': (33.372,141.320,20.504)
OP1: (31.405,142.776,21.009)
OP2: (31.338,140.263,21.508)
C3': (29.287,141.342,17.024)
C1': (30.248,139.507,15.907)
C5': (31.495,142.031,18.100)
O4': (31.300,140.305,16.420)
C8: (30.643,138.099,18.002)
O2': (28.841,141.014,14.663)
C6: (29.246,134.954,17.302)
C5: (29.747,136.257,17.438)
C4: (29.560,137.115,16.368)
P: (31.774,141.385,20.645)
C4': (30.774,141.587,16.850)
C2': (28.979,140.363,15.907)
C2: (28.499,135.581,15.205)
N1: (28.608,134.642,16.151)
N3: (28.937,136.836,15.210)
N6: (29.374,134.011,18.239)
N7: (30.428,136.892,18.466)
N9: (30.153,138.300,16.730)
O5': (31.246,141.101,19.171)
O3': (28.550,142.542,16.885)
OP2: (31.338,140.263,21.508)
C3': (29.287,141.342,17.024)
C1': (30.248,139.507,15.907)
C5': (31.495,142.031,18.100)
O4': (31.300,140.305,16.420)
C8: (30.643,138.099,18.002)
O2': (28.841,141.014,14.663)
C6: (29.246,134.954,17.302)
C5: (29.747,136.257,17.438)
C4: (29.560,137.115,16.368)
P: (31.774,141.385,20.645)
C4': (30.774,141.587,16.850)
C2': (28.979,140.363,15.907)
C2: (28.499,135.581,15.205)
N1: (28.608,134.642,16.151)
N3: (28.937,136.836,15.210)
N6: (29.374,134.011,18.239)
N7: (30.428,136.892,18.466)
N9: (30.153,138.300,16.730)
O5': (31.246,141.101,19.171)
O3': (28.550,142.542,16.885)
Image (generated by PyMOL):