Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1521:1523
Extra
PDB:
ATOM 1 O3' C A 520 80.728 -24.145 4.838 1.00 44.62 O
ATOM 2 P C A 521 81.631 -23.184 5.737 1.00 46.30 P
ATOM 3 OP1 C A 521 81.935 -23.921 7.021 1.00 45.99 O
ATOM 4 OP2 C A 521 80.932 -21.868 5.810 1.00 46.02 O
ATOM 5 O5' C A 521 82.946 -23.055 4.856 1.00 46.78 O
ATOM 6 C5' C A 521 83.716 -24.189 4.539 1.00 47.15 C
ATOM 7 C4' C A 521 84.927 -23.788 3.760 1.00 47.56 C
ATOM 8 O4' C A 521 84.533 -23.405 2.427 1.00 47.95 O
ATOM 9 C3' C A 521 85.662 -22.573 4.268 1.00 47.34 C
ATOM 10 O3' C A 521 86.536 -22.875 5.329 1.00 47.14 O
ATOM 11 C2' C A 521 86.388 -22.126 3.041 1.00 47.84 C
ATOM 12 O2' C A 521 87.456 -22.999 2.800 1.00 48.21 O
ATOM 13 C1' C A 521 85.358 -22.381 1.968 1.00 48.11 C
ATOM 14 N1 C A 521 84.545 -21.208 1.700 1.00 47.95 N
ATOM 15 C2 C A 521 85.066 -20.304 0.796 1.00 48.27 C
ATOM 16 O2 C A 521 86.172 -20.589 0.325 1.00 48.65 O
ATOM 17 N3 C A 521 84.377 -19.174 0.483 1.00 48.17 N
ATOM 18 C4 C A 521 83.198 -18.961 1.065 1.00 47.75 C
ATOM 19 N4 C A 521 82.496 -17.860 0.774 1.00 47.66 N
ATOM 20 C5 C A 521 82.662 -19.894 1.993 1.00 47.43 C
ATOM 21 C6 C A 521 83.349 -20.998 2.286 1.00 47.53 C
ATOM 22 P A A 522 86.758 -21.823 6.512 1.00 47.65 P
ATOM 23 OP1 A A 522 85.584 -21.950 7.441 1.00 47.16 O
ATOM 24 OP2 A A 522 87.041 -20.489 5.862 1.00 47.77 O
ATOM 25 O5' A A 522 88.060 -22.395 7.253 1.00 47.69 O
TER
ATOM 1 O3' A B 522 91.541 -22.935 5.015 1.00 49.14 O
ATOM 2 P G B 523 91.034 -22.348 3.631 1.00 49.92 P
ATOM 3 OP1 G B 523 90.113 -23.335 3.064 1.00 50.09 O
ATOM 4 OP2 G B 523 92.276 -21.973 2.851 1.00 50.38 O
ATOM 5 O5' G B 523 90.239 -21.049 4.106 1.00 49.45 O
ATOM 6 C5' G B 523 89.481 -20.276 3.234 1.00 49.55 C
ATOM 7 C4' G B 523 90.317 -19.399 2.361 1.00 49.91 C
ATOM 8 O4' G B 523 89.496 -18.980 1.260 1.00 50.14 O
ATOM 9 C3' G B 523 90.810 -18.092 2.959 1.00 49.65 C
ATOM 10 O3' G B 523 92.019 -18.245 3.686 1.00 49.62 O
ATOM 11 C2' G B 523 90.972 -17.225 1.728 1.00 50.05 C
ATOM 12 O2' G B 523 92.118 -17.615 1.029 1.00 50.55 O
ATOM 13 C1' G B 523 89.784 -17.657 0.899 1.00 50.19 C
ATOM 14 N9 G B 523 88.596 -16.833 1.158 1.00 49.82 N
ATOM 15 C8 G B 523 87.489 -17.197 1.874 1.00 49.40 C
ATOM 16 N7 G B 523 86.635 -16.222 1.951 1.00 49.15 N
ATOM 17 C5 G B 523 87.201 -15.194 1.226 1.00 49.43 C
ATOM 18 C6 G B 523 86.735 -13.908 0.954 1.00 49.36 C
ATOM 19 O6 G B 523 85.697 -13.366 1.302 1.00 49.04 O
ATOM 20 N1 G B 523 87.587 -13.163 0.196 1.00 49.73 N
ATOM 21 C2 G B 523 88.793 -13.576 -0.268 1.00 50.13 C
ATOM 22 N2 G B 523 89.443 -12.636 -1.006 1.00 50.46 N
ATOM 23 N3 G B 523 89.265 -14.808 -0.023 1.00 50.21 N
ATOM 24 C4 G B 523 88.413 -15.547 0.727 1.00 49.84 C
ATOM 25 P C B 524 92.614 -17.063 4.637 1.00 49.94 P
ATOM 26 OP1 C B 524 93.950 -17.498 5.026 1.00 50.10 O
ATOM 27 OP2 C B 524 91.623 -16.791 5.729 1.00 49.36 O
ATOM 28 O5' C B 524 92.716 -15.807 3.660 1.00 50.20 O
TER
ATOM 2 P C A 521 81.631 -23.184 5.737 1.00 46.30 P
ATOM 3 OP1 C A 521 81.935 -23.921 7.021 1.00 45.99 O
ATOM 4 OP2 C A 521 80.932 -21.868 5.810 1.00 46.02 O
ATOM 5 O5' C A 521 82.946 -23.055 4.856 1.00 46.78 O
ATOM 6 C5' C A 521 83.716 -24.189 4.539 1.00 47.15 C
ATOM 7 C4' C A 521 84.927 -23.788 3.760 1.00 47.56 C
ATOM 8 O4' C A 521 84.533 -23.405 2.427 1.00 47.95 O
ATOM 9 C3' C A 521 85.662 -22.573 4.268 1.00 47.34 C
ATOM 10 O3' C A 521 86.536 -22.875 5.329 1.00 47.14 O
ATOM 11 C2' C A 521 86.388 -22.126 3.041 1.00 47.84 C
ATOM 12 O2' C A 521 87.456 -22.999 2.800 1.00 48.21 O
ATOM 13 C1' C A 521 85.358 -22.381 1.968 1.00 48.11 C
ATOM 14 N1 C A 521 84.545 -21.208 1.700 1.00 47.95 N
ATOM 15 C2 C A 521 85.066 -20.304 0.796 1.00 48.27 C
ATOM 16 O2 C A 521 86.172 -20.589 0.325 1.00 48.65 O
ATOM 17 N3 C A 521 84.377 -19.174 0.483 1.00 48.17 N
ATOM 18 C4 C A 521 83.198 -18.961 1.065 1.00 47.75 C
ATOM 19 N4 C A 521 82.496 -17.860 0.774 1.00 47.66 N
ATOM 20 C5 C A 521 82.662 -19.894 1.993 1.00 47.43 C
ATOM 21 C6 C A 521 83.349 -20.998 2.286 1.00 47.53 C
ATOM 22 P A A 522 86.758 -21.823 6.512 1.00 47.65 P
ATOM 23 OP1 A A 522 85.584 -21.950 7.441 1.00 47.16 O
ATOM 24 OP2 A A 522 87.041 -20.489 5.862 1.00 47.77 O
ATOM 25 O5' A A 522 88.060 -22.395 7.253 1.00 47.69 O
TER
ATOM 1 O3' A B 522 91.541 -22.935 5.015 1.00 49.14 O
ATOM 2 P G B 523 91.034 -22.348 3.631 1.00 49.92 P
ATOM 3 OP1 G B 523 90.113 -23.335 3.064 1.00 50.09 O
ATOM 4 OP2 G B 523 92.276 -21.973 2.851 1.00 50.38 O
ATOM 5 O5' G B 523 90.239 -21.049 4.106 1.00 49.45 O
ATOM 6 C5' G B 523 89.481 -20.276 3.234 1.00 49.55 C
ATOM 7 C4' G B 523 90.317 -19.399 2.361 1.00 49.91 C
ATOM 8 O4' G B 523 89.496 -18.980 1.260 1.00 50.14 O
ATOM 9 C3' G B 523 90.810 -18.092 2.959 1.00 49.65 C
ATOM 10 O3' G B 523 92.019 -18.245 3.686 1.00 49.62 O
ATOM 11 C2' G B 523 90.972 -17.225 1.728 1.00 50.05 C
ATOM 12 O2' G B 523 92.118 -17.615 1.029 1.00 50.55 O
ATOM 13 C1' G B 523 89.784 -17.657 0.899 1.00 50.19 C
ATOM 14 N9 G B 523 88.596 -16.833 1.158 1.00 49.82 N
ATOM 15 C8 G B 523 87.489 -17.197 1.874 1.00 49.40 C
ATOM 16 N7 G B 523 86.635 -16.222 1.951 1.00 49.15 N
ATOM 17 C5 G B 523 87.201 -15.194 1.226 1.00 49.43 C
ATOM 18 C6 G B 523 86.735 -13.908 0.954 1.00 49.36 C
ATOM 19 O6 G B 523 85.697 -13.366 1.302 1.00 49.04 O
ATOM 20 N1 G B 523 87.587 -13.163 0.196 1.00 49.73 N
ATOM 21 C2 G B 523 88.793 -13.576 -0.268 1.00 50.13 C
ATOM 22 N2 G B 523 89.443 -12.636 -1.006 1.00 50.46 N
ATOM 23 N3 G B 523 89.265 -14.808 -0.023 1.00 50.21 N
ATOM 24 C4 G B 523 88.413 -15.547 0.727 1.00 49.84 C
ATOM 25 P C B 524 92.614 -17.063 4.637 1.00 49.94 P
ATOM 26 OP1 C B 524 93.950 -17.498 5.026 1.00 50.10 O
ATOM 27 OP2 C B 524 91.623 -16.791 5.729 1.00 49.36 O
ATOM 28 O5' C B 524 92.716 -15.807 3.660 1.00 50.20 O
TER
Atoms:
C2: (85.066,-20.304,0.796)
OP1: (81.935,-23.921,7.021)
OP2: (80.932,-21.868,5.810)
C4: (83.198,-18.961,1.065)
O5': (82.946,-23.055,4.856)
C3': (85.662,-22.573,4.268)
C1': (85.358,-22.381,1.968)
O4': (84.533,-23.405,2.427)
C5': (83.716,-24.189,4.539)
P: (81.631,-23.184,5.737)
O2: (86.172,-20.589,0.325)
C4': (84.927,-23.788,3.760)
C2': (86.388,-22.126,3.041)
O2': (87.456,-22.999,2.800)
N1: (84.545,-21.208,1.700)
N3: (84.377,-19.174,0.483)
N4: (82.496,-17.860,0.774)
C6: (83.349,-20.998,2.286)
C5: (82.662,-19.894,1.993)
O3': (86.536,-22.875,5.329)
OP1: (81.935,-23.921,7.021)
OP2: (80.932,-21.868,5.810)
C4: (83.198,-18.961,1.065)
O5': (82.946,-23.055,4.856)
C3': (85.662,-22.573,4.268)
C1': (85.358,-22.381,1.968)
O4': (84.533,-23.405,2.427)
C5': (83.716,-24.189,4.539)
P: (81.631,-23.184,5.737)
O2: (86.172,-20.589,0.325)
C4': (84.927,-23.788,3.760)
C2': (86.388,-22.126,3.041)
O2': (87.456,-22.999,2.800)
N1: (84.545,-21.208,1.700)
N3: (84.377,-19.174,0.483)
N4: (82.496,-17.860,0.774)
C6: (83.349,-20.998,2.286)
C5: (82.662,-19.894,1.993)
O3': (86.536,-22.875,5.329)
OP1: (90.113,-23.335,3.064)
OP2: (92.276,-21.973,2.851)
C3': (90.810,-18.092,2.959)
C1': (89.784,-17.657,0.899)
C5': (89.481,-20.276,3.234)
O6: (85.697,-13.366,1.302)
O4': (89.496,-18.980,1.260)
C8: (87.489,-17.197,1.874)
C2: (88.793,-13.576,-0.268)
C6: (86.735,-13.908,0.954)
C5: (87.201,-15.194,1.226)
C4: (88.413,-15.547,0.727)
P: (91.034,-22.348,3.631)
C4': (90.317,-19.399,2.361)
C2': (90.972,-17.225,1.728)
O2': (92.118,-17.615,1.029)
N1: (87.587,-13.163,0.196)
N2: (89.443,-12.636,-1.006)
N3: (89.265,-14.808,-0.023)
N7: (86.635,-16.222,1.951)
N9: (88.596,-16.833,1.158)
O5': (90.239,-21.049,4.106)
O3': (92.019,-18.245,3.686)
OP2: (92.276,-21.973,2.851)
C3': (90.810,-18.092,2.959)
C1': (89.784,-17.657,0.899)
C5': (89.481,-20.276,3.234)
O6: (85.697,-13.366,1.302)
O4': (89.496,-18.980,1.260)
C8: (87.489,-17.197,1.874)
C2: (88.793,-13.576,-0.268)
C6: (86.735,-13.908,0.954)
C5: (87.201,-15.194,1.226)
C4: (88.413,-15.547,0.727)
P: (91.034,-22.348,3.631)
C4': (90.317,-19.399,2.361)
C2': (90.972,-17.225,1.728)
O2': (92.118,-17.615,1.029)
N1: (87.587,-13.163,0.196)
N2: (89.443,-12.636,-1.006)
N3: (89.265,-14.808,-0.023)
N7: (86.635,-16.222,1.951)
N9: (88.596,-16.833,1.158)
O5': (90.239,-21.049,4.106)
O3': (92.019,-18.245,3.686)
Image (generated by PyMOL):