Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12584:12585
Extra
PDB:
ATOM 1 O3' G A2583 10.007 4.788 35.527 1.00 47.37 O
ATOM 2 P C A2584 9.503 4.815 34.008 1.00 47.50 P
ATOM 3 OP1 C A2584 8.580 5.950 33.917 1.00 47.79 O
ATOM 4 OP2 C A2584 9.034 3.448 33.652 1.00 47.55 O
ATOM 5 O5' C A2584 10.807 5.150 33.181 1.00 47.48 O
ATOM 6 C5' C A2584 11.253 6.481 33.016 1.00 47.56 C
ATOM 7 C4' C A2584 12.460 6.498 32.154 1.00 47.55 C
ATOM 8 O4' C A2584 13.416 5.556 32.678 1.00 47.19 O
ATOM 9 C3' C A2584 12.262 6.028 30.721 1.00 47.87 C
ATOM 10 O3' C A2584 11.760 7.038 29.908 1.00 48.25 O
ATOM 11 C2' C A2584 13.666 5.651 30.327 1.00 47.70 C
ATOM 12 O2' C A2584 14.421 6.831 30.065 1.00 47.75 O
ATOM 13 C1' C A2584 14.165 5.000 31.615 1.00 47.26 C
ATOM 14 N1 C A2584 13.918 3.555 31.580 1.00 47.19 N
ATOM 15 C2 C A2584 14.787 2.760 30.823 1.00 47.17 C
ATOM 16 O2 C A2584 15.769 3.265 30.268 1.00 47.19 O
ATOM 17 N3 C A2584 14.519 1.434 30.741 1.00 47.15 N
ATOM 18 C4 C A2584 13.447 0.921 31.351 1.00 47.14 C
ATOM 19 N4 C A2584 13.234 -0.370 31.205 1.00 47.14 N
ATOM 20 C5 C A2584 12.555 1.704 32.121 1.00 47.16 C
ATOM 21 C6 C A2584 12.811 3.013 32.198 1.00 47.19 C
ATOM 22 P A A2585 10.793 6.717 28.686 1.00 44.49 P
ATOM 23 OP1 A A2585 10.191 8.024 28.322 1.00 44.82 O
ATOM 24 OP2 A A2585 9.922 5.597 29.091 1.00 44.45 O
ATOM 25 O5' A A2585 11.755 6.233 27.533 1.00 44.57 O
TER
ATOM 1 O3' C B2584 11.760 7.038 29.908 1.00 48.25 O
ATOM 2 P A B2585 10.793 6.717 28.686 1.00 44.49 P
ATOM 3 OP1 A B2585 10.191 8.024 28.322 1.00 44.82 O
ATOM 4 OP2 A B2585 9.922 5.597 29.091 1.00 44.45 O
ATOM 5 O5' A B2585 11.755 6.233 27.533 1.00 44.57 O
ATOM 6 C5' A B2585 12.864 7.013 27.170 1.00 44.55 C
ATOM 7 C4' A B2585 13.806 6.241 26.304 1.00 44.54 C
ATOM 8 O4' A B2585 14.396 5.146 27.043 1.00 44.16 O
ATOM 9 C3' A B2585 13.189 5.532 25.139 1.00 44.90 C
ATOM 10 O3' A B2585 12.784 6.405 24.103 1.00 45.33 O
ATOM 11 C2' A B2585 14.306 4.577 24.754 1.00 44.74 C
ATOM 12 O2' A B2585 15.350 5.283 24.135 1.00 44.79 O
ATOM 13 C1' A B2585 14.805 4.160 26.118 1.00 44.25 C
ATOM 14 N9 A B2585 14.309 2.850 26.529 1.00 44.13 N
ATOM 15 C8 A B2585 13.480 2.480 27.540 1.00 43.98 C
ATOM 16 N7 A B2585 13.311 1.179 27.608 1.00 43.90 N
ATOM 17 C5 A B2585 14.126 0.676 26.600 1.00 44.01 C
ATOM 18 C6 A B2585 14.424 -0.630 26.123 1.00 44.02 C
ATOM 19 N6 A B2585 13.939 -1.758 26.630 1.00 43.91 N
ATOM 20 N1 A B2585 15.270 -0.767 25.078 1.00 44.16 N
ATOM 21 C2 A B2585 15.771 0.363 24.581 1.00 44.27 C
ATOM 22 N3 A B2585 15.559 1.626 24.932 1.00 44.28 N
ATOM 23 C4 A B2585 14.732 1.712 25.953 1.00 44.14 C
ATOM 24 P G B2586 11.941 5.815 22.861 1.00 45.29 P
ATOM 25 OP1 G B2586 11.511 6.968 22.043 1.00 45.71 O
ATOM 26 OP2 G B2586 10.906 4.878 23.394 1.00 45.25 O
ATOM 27 O5' G B2586 13.027 4.976 22.078 1.00 45.26 O
TER
ATOM 2 P C A2584 9.503 4.815 34.008 1.00 47.50 P
ATOM 3 OP1 C A2584 8.580 5.950 33.917 1.00 47.79 O
ATOM 4 OP2 C A2584 9.034 3.448 33.652 1.00 47.55 O
ATOM 5 O5' C A2584 10.807 5.150 33.181 1.00 47.48 O
ATOM 6 C5' C A2584 11.253 6.481 33.016 1.00 47.56 C
ATOM 7 C4' C A2584 12.460 6.498 32.154 1.00 47.55 C
ATOM 8 O4' C A2584 13.416 5.556 32.678 1.00 47.19 O
ATOM 9 C3' C A2584 12.262 6.028 30.721 1.00 47.87 C
ATOM 10 O3' C A2584 11.760 7.038 29.908 1.00 48.25 O
ATOM 11 C2' C A2584 13.666 5.651 30.327 1.00 47.70 C
ATOM 12 O2' C A2584 14.421 6.831 30.065 1.00 47.75 O
ATOM 13 C1' C A2584 14.165 5.000 31.615 1.00 47.26 C
ATOM 14 N1 C A2584 13.918 3.555 31.580 1.00 47.19 N
ATOM 15 C2 C A2584 14.787 2.760 30.823 1.00 47.17 C
ATOM 16 O2 C A2584 15.769 3.265 30.268 1.00 47.19 O
ATOM 17 N3 C A2584 14.519 1.434 30.741 1.00 47.15 N
ATOM 18 C4 C A2584 13.447 0.921 31.351 1.00 47.14 C
ATOM 19 N4 C A2584 13.234 -0.370 31.205 1.00 47.14 N
ATOM 20 C5 C A2584 12.555 1.704 32.121 1.00 47.16 C
ATOM 21 C6 C A2584 12.811 3.013 32.198 1.00 47.19 C
ATOM 22 P A A2585 10.793 6.717 28.686 1.00 44.49 P
ATOM 23 OP1 A A2585 10.191 8.024 28.322 1.00 44.82 O
ATOM 24 OP2 A A2585 9.922 5.597 29.091 1.00 44.45 O
ATOM 25 O5' A A2585 11.755 6.233 27.533 1.00 44.57 O
TER
ATOM 1 O3' C B2584 11.760 7.038 29.908 1.00 48.25 O
ATOM 2 P A B2585 10.793 6.717 28.686 1.00 44.49 P
ATOM 3 OP1 A B2585 10.191 8.024 28.322 1.00 44.82 O
ATOM 4 OP2 A B2585 9.922 5.597 29.091 1.00 44.45 O
ATOM 5 O5' A B2585 11.755 6.233 27.533 1.00 44.57 O
ATOM 6 C5' A B2585 12.864 7.013 27.170 1.00 44.55 C
ATOM 7 C4' A B2585 13.806 6.241 26.304 1.00 44.54 C
ATOM 8 O4' A B2585 14.396 5.146 27.043 1.00 44.16 O
ATOM 9 C3' A B2585 13.189 5.532 25.139 1.00 44.90 C
ATOM 10 O3' A B2585 12.784 6.405 24.103 1.00 45.33 O
ATOM 11 C2' A B2585 14.306 4.577 24.754 1.00 44.74 C
ATOM 12 O2' A B2585 15.350 5.283 24.135 1.00 44.79 O
ATOM 13 C1' A B2585 14.805 4.160 26.118 1.00 44.25 C
ATOM 14 N9 A B2585 14.309 2.850 26.529 1.00 44.13 N
ATOM 15 C8 A B2585 13.480 2.480 27.540 1.00 43.98 C
ATOM 16 N7 A B2585 13.311 1.179 27.608 1.00 43.90 N
ATOM 17 C5 A B2585 14.126 0.676 26.600 1.00 44.01 C
ATOM 18 C6 A B2585 14.424 -0.630 26.123 1.00 44.02 C
ATOM 19 N6 A B2585 13.939 -1.758 26.630 1.00 43.91 N
ATOM 20 N1 A B2585 15.270 -0.767 25.078 1.00 44.16 N
ATOM 21 C2 A B2585 15.771 0.363 24.581 1.00 44.27 C
ATOM 22 N3 A B2585 15.559 1.626 24.932 1.00 44.28 N
ATOM 23 C4 A B2585 14.732 1.712 25.953 1.00 44.14 C
ATOM 24 P G B2586 11.941 5.815 22.861 1.00 45.29 P
ATOM 25 OP1 G B2586 11.511 6.968 22.043 1.00 45.71 O
ATOM 26 OP2 G B2586 10.906 4.878 23.394 1.00 45.25 O
ATOM 27 O5' G B2586 13.027 4.976 22.078 1.00 45.26 O
TER
Atoms:
C2: (14.787,2.760,30.823)
OP1: (8.580,5.950,33.917)
OP2: (9.034,3.448,33.652)
C4: (13.447,0.921,31.351)
O5': (10.807,5.150,33.181)
C3': (12.262,6.028,30.721)
C1': (14.165,5.000,31.615)
O4': (13.416,5.556,32.678)
C5': (11.253,6.481,33.016)
P: (9.503,4.815,34.008)
O2: (15.769,3.265,30.268)
C4': (12.460,6.498,32.154)
C2': (13.666,5.651,30.327)
O2': (14.421,6.831,30.065)
N1: (13.918,3.555,31.580)
N3: (14.519,1.434,30.741)
N4: (13.234,-0.370,31.205)
C6: (12.811,3.013,32.198)
C5: (12.555,1.704,32.121)
O3': (11.760,7.038,29.908)
OP1: (8.580,5.950,33.917)
OP2: (9.034,3.448,33.652)
C4: (13.447,0.921,31.351)
O5': (10.807,5.150,33.181)
C3': (12.262,6.028,30.721)
C1': (14.165,5.000,31.615)
O4': (13.416,5.556,32.678)
C5': (11.253,6.481,33.016)
P: (9.503,4.815,34.008)
O2: (15.769,3.265,30.268)
C4': (12.460,6.498,32.154)
C2': (13.666,5.651,30.327)
O2': (14.421,6.831,30.065)
N1: (13.918,3.555,31.580)
N3: (14.519,1.434,30.741)
N4: (13.234,-0.370,31.205)
C6: (12.811,3.013,32.198)
C5: (12.555,1.704,32.121)
O3': (11.760,7.038,29.908)
OP1: (10.191,8.024,28.322)
OP2: (9.922,5.597,29.091)
C3': (13.189,5.532,25.139)
C1': (14.805,4.160,26.118)
C5': (12.864,7.013,27.170)
O4': (14.396,5.146,27.043)
C8: (13.480,2.480,27.540)
O2': (15.350,5.283,24.135)
C6: (14.424,-0.630,26.123)
C5: (14.126,0.676,26.600)
C4: (14.732,1.712,25.953)
P: (10.793,6.717,28.686)
C4': (13.806,6.241,26.304)
C2': (14.306,4.577,24.754)
C2: (15.771,0.363,24.581)
N1: (15.270,-0.767,25.078)
N3: (15.559,1.626,24.932)
N6: (13.939,-1.758,26.630)
N7: (13.311,1.179,27.608)
N9: (14.309,2.850,26.529)
O5': (11.755,6.233,27.533)
O3': (12.784,6.405,24.103)
OP2: (9.922,5.597,29.091)
C3': (13.189,5.532,25.139)
C1': (14.805,4.160,26.118)
C5': (12.864,7.013,27.170)
O4': (14.396,5.146,27.043)
C8: (13.480,2.480,27.540)
O2': (15.350,5.283,24.135)
C6: (14.424,-0.630,26.123)
C5: (14.126,0.676,26.600)
C4: (14.732,1.712,25.953)
P: (10.793,6.717,28.686)
C4': (13.806,6.241,26.304)
C2': (14.306,4.577,24.754)
C2: (15.771,0.363,24.581)
N1: (15.270,-0.767,25.078)
N3: (15.559,1.626,24.932)
N6: (13.939,-1.758,26.630)
N7: (13.311,1.179,27.608)
N9: (14.309,2.850,26.529)
O5': (11.755,6.233,27.533)
O3': (12.784,6.405,24.103)
Image (generated by PyMOL):