ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A202:A442

Extra

PDB:
ATOM 1 O3' G A 201 69.170 -49.222 -84.569 1.00 55.00 O
ATOM 2 P A A 202 68.601 -47.863 -85.192 1.00 53.64 P
ATOM 3 OP1 A A 202 69.356 -46.744 -84.587 1.00 54.49 O
ATOM 4 OP2 A A 202 67.135 -47.891 -85.029 1.00 56.86 O
ATOM 5 O5' A A 202 68.982 -48.002 -86.728 1.00 70.62 O
ATOM 6 C5' A A 202 70.254 -48.484 -87.122 1.00 67.14 C
ATOM 7 C4' A A 202 70.208 -49.080 -88.500 1.00 73.23 C
ATOM 8 O4' A A 202 69.715 -50.445 -88.407 1.00 66.48 O
ATOM 9 C3' A A 202 69.285 -48.359 -89.480 1.00 75.49 C
ATOM 10 O3' A A 202 69.850 -48.381 -90.791 1.00 78.45 O
ATOM 11 C2' A A 202 68.039 -49.219 -89.448 1.00 72.34 C
ATOM 12 O2' A A 202 67.229 -49.123 -90.594 1.00 79.21 O
ATOM 13 C1' A A 202 68.637 -50.608 -89.288 1.00 61.93 C
ATOM 14 N9 A A 202 67.701 -51.579 -88.723 1.00 50.23 N
ATOM 15 C8 A A 202 66.762 -51.337 -87.751 1.00 54.25 C
ATOM 16 N7 A A 202 65.986 -52.364 -87.483 1.00 46.54 N
ATOM 17 C5 A A 202 66.426 -53.346 -88.349 1.00 43.68 C
ATOM 18 C6 A A 202 66.007 -54.674 -88.554 1.00 44.92 C
ATOM 19 N6 A A 202 65.023 -55.277 -87.880 1.00 41.66 N
ATOM 20 N1 A A 202 66.654 -55.378 -89.503 1.00 46.08 N
ATOM 21 C2 A A 202 67.643 -54.783 -90.179 1.00 46.07 C
ATOM 22 N3 A A 202 68.123 -53.546 -90.074 1.00 48.25 N
ATOM 23 C4 A A 202 67.469 -52.869 -89.128 1.00 46.05 C
ATOM 24 P A A 203 70.650 -47.096 -91.338 1.00 59.19 P
ATOM 25 OP1 A A 203 69.657 -46.182 -91.944 1.00 72.07 O
ATOM 26 OP2 A A 203 71.757 -47.593 -92.162 1.00 72.38 O
ATOM 27 O5' A A 203 71.219 -46.457 -90.004 1.00 58.76 O
TER

ATOM 1 O3' C B 441 57.155 -49.928 -82.403 1.00 42.10 O
ATOM 2 P U B 442 57.885 -51.071 -81.583 1.00 46.20 P
ATOM 3 OP1 U B 442 56.844 -51.825 -80.834 1.00 49.71 O
ATOM 4 OP2 U B 442 58.969 -50.419 -80.819 1.00 67.61 O
ATOM 5 O5' U B 442 58.505 -51.981 -82.736 1.00 41.60 O
ATOM 6 C5' U B 442 57.674 -52.619 -83.678 1.00 40.19 C
ATOM 7 C4' U B 442 58.464 -53.363 -84.717 1.00 36.92 C
ATOM 8 O4' U B 442 59.183 -52.437 -85.555 1.00 40.54 O
ATOM 9 C3' U B 442 59.537 -54.292 -84.213 1.00 40.15 C
ATOM 10 O3' U B 442 59.024 -55.508 -83.757 1.00 43.18 O
ATOM 11 C2' U B 442 60.418 -54.447 -85.436 1.00 49.39 C
ATOM 12 O2' U B 442 59.822 -55.333 -86.369 1.00 50.18 O
ATOM 13 C1' U B 442 60.371 -53.041 -86.009 1.00 46.91 C
ATOM 14 N1 U B 442 61.506 -52.238 -85.555 1.00 45.28 N
ATOM 15 C2 U B 442 62.700 -52.527 -86.162 1.00 43.79 C
ATOM 16 O2 U B 442 62.819 -53.395 -87.020 1.00 42.79 O
ATOM 17 N3 U B 442 63.723 -51.746 -85.714 1.00 43.75 N
ATOM 18 C4 U B 442 63.665 -50.763 -84.751 1.00 44.38 C
ATOM 19 O4 U B 442 64.695 -50.159 -84.461 1.00 53.16 O
ATOM 20 C5 U B 442 62.387 -50.540 -84.161 1.00 40.35 C
ATOM 21 C6 U B 442 61.367 -51.274 -84.583 1.00 45.88 C
ATOM 22 P A B 443 59.555 -56.165 -82.398 1.00 46.46 P
ATOM 23 OP1 A B 443 59.476 -55.125 -81.334 1.00 45.63 O
ATOM 24 OP2 A B 443 60.863 -56.800 -82.680 1.00 42.04 O
ATOM 25 O5' A B 443 58.457 -57.268 -82.155 1.00 46.58 O
TER

Atoms:
OP1: (69.356,-46.744,-84.587)
OP2: (67.135,-47.891,-85.029)
C3': (69.285,-48.359,-89.480)
C1': (68.637,-50.608,-89.288)
C5': (70.254,-48.484,-87.122)
O4': (69.715,-50.445,-88.407)
C8: (66.762,-51.337,-87.751)
O2': (67.229,-49.123,-90.594)
C6: (66.007,-54.674,-88.554)
C5: (66.426,-53.346,-88.349)
C4: (67.469,-52.869,-89.128)
P: (68.601,-47.863,-85.192)
C4': (70.208,-49.080,-88.500)
C2': (68.039,-49.219,-89.448)
C2: (67.643,-54.783,-90.179)
N1: (66.654,-55.378,-89.503)
N3: (68.123,-53.546,-90.074)
N6: (65.023,-55.277,-87.880)
N7: (65.986,-52.364,-87.483)
N9: (67.701,-51.579,-88.723)
O5': (68.982,-48.002,-86.728)
O3': (69.850,-48.381,-90.791)
C4: (63.665,-50.763,-84.751)
N3: (63.723,-51.746,-85.714)
OP1: (56.844,-51.825,-80.834)
OP2: (58.969,-50.419,-80.819)
C2: (62.700,-52.527,-86.162)
C1': (60.371,-53.041,-86.009)
C3': (59.537,-54.292,-84.213)
O5': (58.505,-51.981,-82.736)
O4': (59.183,-52.437,-85.555)
C5': (57.674,-52.619,-83.678)
P: (57.885,-51.071,-81.583)
C4': (58.464,-53.363,-84.717)
C2': (60.418,-54.447,-85.436)
O2': (59.822,-55.333,-86.369)
N1: (61.506,-52.238,-85.555)
O4: (64.695,-50.159,-84.461)
O2: (62.819,-53.395,-87.020)
C6: (61.367,-51.274,-84.583)
C5: (62.387,-50.540,-84.161)
O3': (59.024,-55.508,-83.757)
Image (generated by PyMOL):
PyMOL image
show in jmol