Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2081:A2089
Extra
PDB:
ATOM 1 O3' G A2080 118.333 105.683 28.437 1.00 86.76 O
ATOM 2 P A A2081 119.302 104.380 28.521 1.00 87.34 P
ATOM 3 OP1 A A2081 119.139 103.594 27.278 1.00 87.41 O
ATOM 4 OP2 A A2081 119.089 103.720 29.838 1.00 86.77 O
ATOM 5 O5' A A2081 120.796 104.946 28.511 1.00 88.07 O
ATOM 6 C5' A A2081 121.360 105.619 27.355 1.00 90.10 C
ATOM 7 C4' A A2081 122.823 105.954 27.603 1.00 91.97 C
ATOM 8 O4' A A2081 122.911 106.879 28.723 1.00 92.45 O
ATOM 9 C3' A A2081 123.705 104.778 28.002 1.00 93.51 C
ATOM 10 O3' A A2081 124.190 104.001 26.899 1.00 93.78 O
ATOM 11 C2' A A2081 124.803 105.431 28.845 1.00 94.46 C
ATOM 12 O2' A A2081 125.929 105.933 28.150 1.00 94.59 O
ATOM 13 C1' A A2081 124.044 106.574 29.523 1.00 94.24 C
ATOM 14 N9 A A2081 123.582 106.215 30.870 1.00 95.04 N
ATOM 15 C8 A A2081 122.293 105.966 31.269 1.00 95.08 C
ATOM 16 N7 A A2081 122.183 105.631 32.531 1.00 95.11 N
ATOM 17 C5 A A2081 123.487 105.670 33.003 1.00 95.48 C
ATOM 18 C6 A A2081 124.041 105.408 34.269 1.00 95.57 C
ATOM 19 N6 A A2081 123.322 105.025 35.326 1.00 95.74 N
ATOM 20 N1 A A2081 125.378 105.543 34.411 1.00 95.85 N
ATOM 21 C2 A A2081 126.102 105.908 33.344 1.00 96.46 C
ATOM 22 N3 A A2081 125.697 106.175 32.100 1.00 96.80 N
ATOM 23 C4 A A2081 124.362 106.037 31.994 1.00 95.84 C
ATOM 24 P G A2082 124.540 102.443 27.119 1.00 93.81 P
ATOM 25 OP1 G A2082 124.849 101.880 25.786 1.00 94.15 O
ATOM 26 OP2 G A2082 123.460 101.835 27.941 1.00 93.68 O
ATOM 27 O5' G A2082 125.874 102.452 27.993 1.00 95.18 O
TER
ATOM 1 O3' U B2088 124.923 114.974 29.453 1.00 86.46 O
ATOM 2 P C B2089 124.498 116.348 28.752 1.00 86.25 P
ATOM 3 OP1 C B2089 124.826 116.185 27.317 1.00 87.34 O
ATOM 4 OP2 C B2089 125.069 117.492 29.517 1.00 86.68 O
ATOM 5 O5' C B2089 122.921 116.358 28.920 1.00 86.03 O
ATOM 6 C5' C B2089 122.050 117.009 27.972 1.00 83.41 C
ATOM 7 C4' C B2089 120.629 116.600 28.262 1.00 81.37 C
ATOM 8 O4' C B2089 120.437 115.214 27.853 1.00 80.99 O
ATOM 9 C3' C B2089 120.324 116.630 29.757 1.00 80.27 C
ATOM 10 O3' C B2089 118.943 116.868 29.967 1.00 78.45 O
ATOM 11 C2' C B2089 120.697 115.215 30.181 1.00 79.81 C
ATOM 12 O2' C B2089 120.123 114.828 31.406 1.00 79.25 O
ATOM 13 C1' C B2089 120.162 114.421 28.992 1.00 81.09 C
ATOM 14 N1 C B2089 120.729 113.074 28.784 1.00 82.76 N
ATOM 15 C2 C B2089 119.885 111.948 28.955 1.00 83.31 C
ATOM 16 O2 C B2089 118.697 112.122 29.273 1.00 82.61 O
ATOM 17 N3 C B2089 120.393 110.709 28.767 1.00 83.67 N
ATOM 18 C4 C B2089 121.676 110.561 28.427 1.00 84.08 C
ATOM 19 N4 C B2089 122.143 109.321 28.266 1.00 84.52 N
ATOM 20 C5 C B2089 122.546 111.680 28.241 1.00 83.92 C
ATOM 21 C6 C B2089 122.039 112.904 28.428 1.00 83.20 C
ATOM 22 P A B2090 118.474 118.204 30.717 1.00 77.12 P
ATOM 23 OP1 A B2090 118.603 119.328 29.748 1.00 76.78 O
ATOM 24 OP2 A B2090 119.208 118.253 32.008 1.00 76.29 O
ATOM 25 O5' A B2090 116.921 117.958 30.986 1.00 75.32 O
TER
ATOM 2 P A A2081 119.302 104.380 28.521 1.00 87.34 P
ATOM 3 OP1 A A2081 119.139 103.594 27.278 1.00 87.41 O
ATOM 4 OP2 A A2081 119.089 103.720 29.838 1.00 86.77 O
ATOM 5 O5' A A2081 120.796 104.946 28.511 1.00 88.07 O
ATOM 6 C5' A A2081 121.360 105.619 27.355 1.00 90.10 C
ATOM 7 C4' A A2081 122.823 105.954 27.603 1.00 91.97 C
ATOM 8 O4' A A2081 122.911 106.879 28.723 1.00 92.45 O
ATOM 9 C3' A A2081 123.705 104.778 28.002 1.00 93.51 C
ATOM 10 O3' A A2081 124.190 104.001 26.899 1.00 93.78 O
ATOM 11 C2' A A2081 124.803 105.431 28.845 1.00 94.46 C
ATOM 12 O2' A A2081 125.929 105.933 28.150 1.00 94.59 O
ATOM 13 C1' A A2081 124.044 106.574 29.523 1.00 94.24 C
ATOM 14 N9 A A2081 123.582 106.215 30.870 1.00 95.04 N
ATOM 15 C8 A A2081 122.293 105.966 31.269 1.00 95.08 C
ATOM 16 N7 A A2081 122.183 105.631 32.531 1.00 95.11 N
ATOM 17 C5 A A2081 123.487 105.670 33.003 1.00 95.48 C
ATOM 18 C6 A A2081 124.041 105.408 34.269 1.00 95.57 C
ATOM 19 N6 A A2081 123.322 105.025 35.326 1.00 95.74 N
ATOM 20 N1 A A2081 125.378 105.543 34.411 1.00 95.85 N
ATOM 21 C2 A A2081 126.102 105.908 33.344 1.00 96.46 C
ATOM 22 N3 A A2081 125.697 106.175 32.100 1.00 96.80 N
ATOM 23 C4 A A2081 124.362 106.037 31.994 1.00 95.84 C
ATOM 24 P G A2082 124.540 102.443 27.119 1.00 93.81 P
ATOM 25 OP1 G A2082 124.849 101.880 25.786 1.00 94.15 O
ATOM 26 OP2 G A2082 123.460 101.835 27.941 1.00 93.68 O
ATOM 27 O5' G A2082 125.874 102.452 27.993 1.00 95.18 O
TER
ATOM 1 O3' U B2088 124.923 114.974 29.453 1.00 86.46 O
ATOM 2 P C B2089 124.498 116.348 28.752 1.00 86.25 P
ATOM 3 OP1 C B2089 124.826 116.185 27.317 1.00 87.34 O
ATOM 4 OP2 C B2089 125.069 117.492 29.517 1.00 86.68 O
ATOM 5 O5' C B2089 122.921 116.358 28.920 1.00 86.03 O
ATOM 6 C5' C B2089 122.050 117.009 27.972 1.00 83.41 C
ATOM 7 C4' C B2089 120.629 116.600 28.262 1.00 81.37 C
ATOM 8 O4' C B2089 120.437 115.214 27.853 1.00 80.99 O
ATOM 9 C3' C B2089 120.324 116.630 29.757 1.00 80.27 C
ATOM 10 O3' C B2089 118.943 116.868 29.967 1.00 78.45 O
ATOM 11 C2' C B2089 120.697 115.215 30.181 1.00 79.81 C
ATOM 12 O2' C B2089 120.123 114.828 31.406 1.00 79.25 O
ATOM 13 C1' C B2089 120.162 114.421 28.992 1.00 81.09 C
ATOM 14 N1 C B2089 120.729 113.074 28.784 1.00 82.76 N
ATOM 15 C2 C B2089 119.885 111.948 28.955 1.00 83.31 C
ATOM 16 O2 C B2089 118.697 112.122 29.273 1.00 82.61 O
ATOM 17 N3 C B2089 120.393 110.709 28.767 1.00 83.67 N
ATOM 18 C4 C B2089 121.676 110.561 28.427 1.00 84.08 C
ATOM 19 N4 C B2089 122.143 109.321 28.266 1.00 84.52 N
ATOM 20 C5 C B2089 122.546 111.680 28.241 1.00 83.92 C
ATOM 21 C6 C B2089 122.039 112.904 28.428 1.00 83.20 C
ATOM 22 P A B2090 118.474 118.204 30.717 1.00 77.12 P
ATOM 23 OP1 A B2090 118.603 119.328 29.748 1.00 76.78 O
ATOM 24 OP2 A B2090 119.208 118.253 32.008 1.00 76.29 O
ATOM 25 O5' A B2090 116.921 117.958 30.986 1.00 75.32 O
TER
Atoms:
OP1: (119.139,103.594,27.278)
OP2: (119.089,103.720,29.838)
C3': (123.705,104.778,28.002)
C1': (124.044,106.574,29.523)
C5': (121.360,105.619,27.355)
O4': (122.911,106.879,28.723)
C8: (122.293,105.966,31.269)
O2': (125.929,105.933,28.150)
C6: (124.041,105.408,34.269)
C5: (123.487,105.670,33.003)
C4: (124.362,106.037,31.994)
P: (119.302,104.380,28.521)
C4': (122.823,105.954,27.603)
C2': (124.803,105.431,28.845)
C2: (126.102,105.908,33.344)
N1: (125.378,105.543,34.411)
N3: (125.697,106.175,32.100)
N6: (123.322,105.025,35.326)
N7: (122.183,105.631,32.531)
N9: (123.582,106.215,30.870)
O5': (120.796,104.946,28.511)
O3': (124.190,104.001,26.899)
OP2: (119.089,103.720,29.838)
C3': (123.705,104.778,28.002)
C1': (124.044,106.574,29.523)
C5': (121.360,105.619,27.355)
O4': (122.911,106.879,28.723)
C8: (122.293,105.966,31.269)
O2': (125.929,105.933,28.150)
C6: (124.041,105.408,34.269)
C5: (123.487,105.670,33.003)
C4: (124.362,106.037,31.994)
P: (119.302,104.380,28.521)
C4': (122.823,105.954,27.603)
C2': (124.803,105.431,28.845)
C2: (126.102,105.908,33.344)
N1: (125.378,105.543,34.411)
N3: (125.697,106.175,32.100)
N6: (123.322,105.025,35.326)
N7: (122.183,105.631,32.531)
N9: (123.582,106.215,30.870)
O5': (120.796,104.946,28.511)
O3': (124.190,104.001,26.899)
C2: (119.885,111.948,28.955)
OP1: (124.826,116.185,27.317)
OP2: (125.069,117.492,29.517)
C4: (121.676,110.561,28.427)
O5': (122.921,116.358,28.920)
C3': (120.324,116.630,29.757)
C1': (120.162,114.421,28.992)
O4': (120.437,115.214,27.853)
C5': (122.050,117.009,27.972)
P: (124.498,116.348,28.752)
O2: (118.697,112.122,29.273)
C4': (120.629,116.600,28.262)
C2': (120.697,115.215,30.181)
O2': (120.123,114.828,31.406)
N1: (120.729,113.074,28.784)
N3: (120.393,110.709,28.767)
N4: (122.143,109.321,28.266)
C6: (122.039,112.904,28.428)
C5: (122.546,111.680,28.241)
O3': (118.943,116.868,29.967)
OP1: (124.826,116.185,27.317)
OP2: (125.069,117.492,29.517)
C4: (121.676,110.561,28.427)
O5': (122.921,116.358,28.920)
C3': (120.324,116.630,29.757)
C1': (120.162,114.421,28.992)
O4': (120.437,115.214,27.853)
C5': (122.050,117.009,27.972)
P: (124.498,116.348,28.752)
O2: (118.697,112.122,29.273)
C4': (120.629,116.600,28.262)
C2': (120.697,115.215,30.181)
O2': (120.123,114.828,31.406)
N1: (120.729,113.074,28.784)
N3: (120.393,110.709,28.767)
N4: (122.143,109.321,28.266)
C6: (122.039,112.904,28.428)
C5: (122.546,111.680,28.241)
O3': (118.943,116.868,29.967)
Image (generated by PyMOL):