ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:02081:02089

Extra

PDB:
ATOM 1 O3' G A2080 117.586 104.934 27.360 1.00 70.25 O
ATOM 2 P A A2081 118.416 103.555 27.402 1.00 73.03 P
ATOM 3 OP1 A A2081 118.093 102.827 26.152 1.00 74.26 O
ATOM 4 OP2 A A2081 118.195 102.890 28.713 1.00 72.96 O
ATOM 5 O5' A A2081 119.942 104.010 27.347 1.00 74.24 O
ATOM 6 C5' A A2081 120.481 104.661 26.182 1.00 76.83 C
ATOM 7 C4' A A2081 121.918 105.061 26.426 1.00 78.81 C
ATOM 8 O4' A A2081 121.971 105.995 27.538 1.00 78.60 O
ATOM 9 C3' A A2081 122.859 103.941 26.843 1.00 80.43 C
ATOM 10 O3' A A2081 123.329 103.187 25.725 1.00 82.57 O
ATOM 11 C2' A A2081 123.964 104.710 27.554 1.00 79.84 C
ATOM 12 O2' A A2081 124.848 105.352 26.657 1.00 79.68 O
ATOM 13 C1' A A2081 123.152 105.776 28.295 1.00 78.99 C
ATOM 14 N9 A A2081 122.760 105.363 29.646 1.00 78.94 N
ATOM 15 C8 A A2081 121.502 105.030 30.090 1.00 79.30 C
ATOM 16 N7 A A2081 121.460 104.685 31.354 1.00 78.85 N
ATOM 17 C5 A A2081 122.777 104.802 31.775 1.00 79.17 C
ATOM 18 C6 A A2081 123.395 104.576 33.018 1.00 79.07 C
ATOM 19 N6 A A2081 122.737 104.181 34.110 1.00 78.81 N
ATOM 20 N1 A A2081 124.729 104.776 33.102 1.00 79.23 N
ATOM 21 C2 A A2081 125.385 105.179 32.007 1.00 78.98 C
ATOM 22 N3 A A2081 124.916 105.432 30.787 1.00 79.21 N
ATOM 23 C4 A A2081 123.589 105.220 30.734 1.00 79.13 C
ATOM 24 P G A2082 123.725 101.634 25.911 1.00 85.24 P
ATOM 25 OP1 G A2082 123.946 101.083 24.550 1.00 84.68 O
ATOM 26 OP2 G A2082 122.744 100.975 26.813 1.00 84.90 O
ATOM 27 O5' G A2082 125.128 101.683 26.665 1.00 85.52 O
TER

ATOM 1 O3' U B2088 124.366 114.249 28.242 1.00 65.22 O
ATOM 2 P C B2089 123.867 115.644 27.620 1.00 65.82 P
ATOM 3 OP1 C B2089 124.681 115.923 26.410 1.00 67.61 O
ATOM 4 OP2 C B2089 123.776 116.668 28.695 1.00 65.38 O
ATOM 5 O5' C B2089 122.400 115.266 27.124 1.00 65.72 O
ATOM 6 C5' C B2089 121.425 116.265 26.760 1.00 61.30 C
ATOM 7 C4' C B2089 120.064 115.844 27.268 1.00 59.11 C
ATOM 8 O4' C B2089 119.821 114.468 26.847 1.00 58.03 O
ATOM 9 C3' C B2089 119.927 115.826 28.791 1.00 58.00 C
ATOM 10 O3' C B2089 118.557 115.996 29.123 1.00 56.09 O
ATOM 11 C2' C B2089 120.326 114.398 29.133 1.00 56.72 C
ATOM 12 O2' C B2089 119.847 113.953 30.384 1.00 55.26 O
ATOM 13 C1' C B2089 119.656 113.650 27.986 1.00 57.13 C
ATOM 14 N1 C B2089 120.203 112.317 27.708 1.00 58.63 N
ATOM 15 C2 C B2089 119.366 111.202 27.879 1.00 59.33 C
ATOM 16 O2 C B2089 118.187 111.379 28.244 1.00 58.37 O
ATOM 17 N3 C B2089 119.856 109.967 27.642 1.00 59.95 N
ATOM 18 C4 C B2089 121.120 109.816 27.243 1.00 61.16 C
ATOM 19 N4 C B2089 121.556 108.575 27.014 1.00 62.13 N
ATOM 20 C5 C B2089 121.993 110.930 27.058 1.00 60.88 C
ATOM 21 C6 C B2089 121.497 112.151 27.298 1.00 59.20 C
ATOM 22 P A B2090 118.056 117.362 29.785 1.00 54.45 P
ATOM 23 OP1 A B2090 118.086 118.417 28.742 1.00 55.65 O
ATOM 24 OP2 A B2090 118.818 117.548 31.044 1.00 55.28 O
ATOM 25 O5' A B2090 116.525 117.067 30.116 1.00 55.36 O
TER

Atoms:
OP1: (118.093,102.827,26.152)
OP2: (118.195,102.890,28.713)
C3': (122.859,103.941,26.843)
C1': (123.152,105.776,28.295)
C5': (120.481,104.661,26.182)
O4': (121.971,105.995,27.538)
C8: (121.502,105.030,30.090)
O2': (124.848,105.352,26.657)
C6: (123.395,104.576,33.018)
C5: (122.777,104.802,31.775)
C4: (123.589,105.220,30.734)
P: (118.416,103.555,27.402)
C4': (121.918,105.061,26.426)
C2': (123.964,104.710,27.554)
C2: (125.385,105.179,32.007)
N1: (124.729,104.776,33.102)
N3: (124.916,105.432,30.787)
N6: (122.737,104.181,34.110)
N7: (121.460,104.685,31.354)
N9: (122.760,105.363,29.646)
O5': (119.942,104.010,27.347)
O3': (123.329,103.187,25.725)
C2: (119.366,111.202,27.879)
OP1: (124.681,115.923,26.410)
OP2: (123.776,116.668,28.695)
C4: (121.120,109.816,27.243)
O5': (122.400,115.266,27.124)
C3': (119.927,115.826,28.791)
C1': (119.656,113.650,27.986)
O4': (119.821,114.468,26.847)
C5': (121.425,116.265,26.760)
P: (123.867,115.644,27.620)
O2: (118.187,111.379,28.244)
C4': (120.064,115.844,27.268)
C2': (120.326,114.398,29.133)
O2': (119.847,113.953,30.384)
N1: (120.203,112.317,27.708)
N3: (119.856,109.967,27.642)
N4: (121.556,108.575,27.014)
C6: (121.497,112.151,27.298)
C5: (121.993,110.930,27.058)
O3': (118.557,115.996,29.123)
Image (generated by PyMOL):
PyMOL image
show in jmol