Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02081:02089
Extra
PDB:
ATOM 1 O3' G A2080 118.559 105.895 28.347 1.00 91.75 O
ATOM 2 P A A2081 119.642 104.697 28.385 1.00 92.54 P
ATOM 3 OP1 A A2081 119.576 104.074 27.038 1.00 93.27 O
ATOM 4 OP2 A A2081 119.440 103.856 29.591 1.00 91.54 O
ATOM 5 O5' A A2081 121.054 105.426 28.532 1.00 94.81 O
ATOM 6 C5' A A2081 121.693 106.038 27.390 1.00 98.71 C
ATOM 7 C4' A A2081 123.153 106.309 27.677 1.00101.01 C
ATOM 8 O4' A A2081 123.260 107.251 28.776 1.00101.94 O
ATOM 9 C3' A A2081 123.991 105.123 28.131 1.00102.74 C
ATOM 10 O3' A A2081 124.414 104.302 27.038 1.00103.74 O
ATOM 11 C2' A A2081 125.153 105.809 28.844 1.00103.50 C
ATOM 12 O2' A A2081 126.148 106.317 27.977 1.00103.76 O
ATOM 13 C1' A A2081 124.439 106.982 29.521 1.00104.03 C
ATOM 14 N9 A A2081 124.070 106.691 30.908 1.00105.67 N
ATOM 15 C8 A A2081 122.833 106.385 31.424 1.00105.85 C
ATOM 16 N7 A A2081 122.841 106.160 32.715 1.00106.23 N
ATOM 17 C5 A A2081 124.170 106.331 33.077 1.00107.01 C
ATOM 18 C6 A A2081 124.840 106.222 34.311 1.00107.57 C
ATOM 19 N6 A A2081 124.233 105.910 35.458 1.00107.38 N
ATOM 20 N1 A A2081 126.174 106.448 34.326 1.00108.24 N
ATOM 21 C2 A A2081 126.784 106.760 33.176 1.00108.25 C
ATOM 22 N3 A A2081 126.265 106.894 31.956 1.00108.06 N
ATOM 23 C4 A A2081 124.938 106.662 31.975 1.00107.05 C
ATOM 24 P G A2082 124.777 102.750 27.292 1.00104.07 P
ATOM 25 OP1 G A2082 125.085 102.163 25.966 1.00103.56 O
ATOM 26 OP2 G A2082 123.714 102.134 28.128 1.00103.94 O
ATOM 27 O5' G A2082 126.117 102.803 28.159 1.00104.16 O
TER
ATOM 1 O3' U B2088 125.156 115.551 29.409 1.00 89.81 O
ATOM 2 P C B2089 124.610 116.964 28.870 1.00 89.59 P
ATOM 3 OP1 C B2089 125.589 117.484 27.889 1.00 89.73 O
ATOM 4 OP2 C B2089 124.204 117.820 30.019 1.00 89.90 O
ATOM 5 O5' C B2089 123.304 116.506 28.075 1.00 88.93 O
ATOM 6 C5' C B2089 122.265 117.432 27.699 1.00 85.95 C
ATOM 7 C4' C B2089 120.924 116.941 28.209 1.00 84.13 C
ATOM 8 O4' C B2089 120.744 115.542 27.834 1.00 83.35 O
ATOM 9 C3' C B2089 120.745 116.976 29.726 1.00 82.81 C
ATOM 10 O3' C B2089 119.358 117.117 30.003 1.00 81.83 O
ATOM 11 C2' C B2089 121.139 115.565 30.130 1.00 82.14 C
ATOM 12 O2' C B2089 120.591 115.198 31.370 1.00 82.13 O
ATOM 13 C1' C B2089 120.492 114.779 28.998 1.00 83.08 C
ATOM 14 N1 C B2089 120.968 113.402 28.799 1.00 84.42 N
ATOM 15 C2 C B2089 120.062 112.340 28.990 1.00 85.61 C
ATOM 16 O2 C B2089 118.886 112.591 29.319 1.00 84.42 O
ATOM 17 N3 C B2089 120.490 111.068 28.810 1.00 86.37 N
ATOM 18 C4 C B2089 121.756 110.833 28.457 1.00 86.42 C
ATOM 19 N4 C B2089 122.136 109.562 28.299 1.00 86.63 N
ATOM 20 C5 C B2089 122.692 111.891 28.253 1.00 86.32 C
ATOM 21 C6 C B2089 122.260 113.147 28.434 1.00 85.54 C
ATOM 22 P A B2090 118.812 118.445 30.704 1.00 81.74 P
ATOM 23 OP1 A B2090 118.847 119.529 29.687 1.00 81.26 O
ATOM 24 OP2 A B2090 119.534 118.604 31.994 1.00 79.30 O
ATOM 25 O5' A B2090 117.276 118.130 30.977 1.00 80.95 O
TER
ATOM 2 P A A2081 119.642 104.697 28.385 1.00 92.54 P
ATOM 3 OP1 A A2081 119.576 104.074 27.038 1.00 93.27 O
ATOM 4 OP2 A A2081 119.440 103.856 29.591 1.00 91.54 O
ATOM 5 O5' A A2081 121.054 105.426 28.532 1.00 94.81 O
ATOM 6 C5' A A2081 121.693 106.038 27.390 1.00 98.71 C
ATOM 7 C4' A A2081 123.153 106.309 27.677 1.00101.01 C
ATOM 8 O4' A A2081 123.260 107.251 28.776 1.00101.94 O
ATOM 9 C3' A A2081 123.991 105.123 28.131 1.00102.74 C
ATOM 10 O3' A A2081 124.414 104.302 27.038 1.00103.74 O
ATOM 11 C2' A A2081 125.153 105.809 28.844 1.00103.50 C
ATOM 12 O2' A A2081 126.148 106.317 27.977 1.00103.76 O
ATOM 13 C1' A A2081 124.439 106.982 29.521 1.00104.03 C
ATOM 14 N9 A A2081 124.070 106.691 30.908 1.00105.67 N
ATOM 15 C8 A A2081 122.833 106.385 31.424 1.00105.85 C
ATOM 16 N7 A A2081 122.841 106.160 32.715 1.00106.23 N
ATOM 17 C5 A A2081 124.170 106.331 33.077 1.00107.01 C
ATOM 18 C6 A A2081 124.840 106.222 34.311 1.00107.57 C
ATOM 19 N6 A A2081 124.233 105.910 35.458 1.00107.38 N
ATOM 20 N1 A A2081 126.174 106.448 34.326 1.00108.24 N
ATOM 21 C2 A A2081 126.784 106.760 33.176 1.00108.25 C
ATOM 22 N3 A A2081 126.265 106.894 31.956 1.00108.06 N
ATOM 23 C4 A A2081 124.938 106.662 31.975 1.00107.05 C
ATOM 24 P G A2082 124.777 102.750 27.292 1.00104.07 P
ATOM 25 OP1 G A2082 125.085 102.163 25.966 1.00103.56 O
ATOM 26 OP2 G A2082 123.714 102.134 28.128 1.00103.94 O
ATOM 27 O5' G A2082 126.117 102.803 28.159 1.00104.16 O
TER
ATOM 1 O3' U B2088 125.156 115.551 29.409 1.00 89.81 O
ATOM 2 P C B2089 124.610 116.964 28.870 1.00 89.59 P
ATOM 3 OP1 C B2089 125.589 117.484 27.889 1.00 89.73 O
ATOM 4 OP2 C B2089 124.204 117.820 30.019 1.00 89.90 O
ATOM 5 O5' C B2089 123.304 116.506 28.075 1.00 88.93 O
ATOM 6 C5' C B2089 122.265 117.432 27.699 1.00 85.95 C
ATOM 7 C4' C B2089 120.924 116.941 28.209 1.00 84.13 C
ATOM 8 O4' C B2089 120.744 115.542 27.834 1.00 83.35 O
ATOM 9 C3' C B2089 120.745 116.976 29.726 1.00 82.81 C
ATOM 10 O3' C B2089 119.358 117.117 30.003 1.00 81.83 O
ATOM 11 C2' C B2089 121.139 115.565 30.130 1.00 82.14 C
ATOM 12 O2' C B2089 120.591 115.198 31.370 1.00 82.13 O
ATOM 13 C1' C B2089 120.492 114.779 28.998 1.00 83.08 C
ATOM 14 N1 C B2089 120.968 113.402 28.799 1.00 84.42 N
ATOM 15 C2 C B2089 120.062 112.340 28.990 1.00 85.61 C
ATOM 16 O2 C B2089 118.886 112.591 29.319 1.00 84.42 O
ATOM 17 N3 C B2089 120.490 111.068 28.810 1.00 86.37 N
ATOM 18 C4 C B2089 121.756 110.833 28.457 1.00 86.42 C
ATOM 19 N4 C B2089 122.136 109.562 28.299 1.00 86.63 N
ATOM 20 C5 C B2089 122.692 111.891 28.253 1.00 86.32 C
ATOM 21 C6 C B2089 122.260 113.147 28.434 1.00 85.54 C
ATOM 22 P A B2090 118.812 118.445 30.704 1.00 81.74 P
ATOM 23 OP1 A B2090 118.847 119.529 29.687 1.00 81.26 O
ATOM 24 OP2 A B2090 119.534 118.604 31.994 1.00 79.30 O
ATOM 25 O5' A B2090 117.276 118.130 30.977 1.00 80.95 O
TER
Atoms:
OP1: (119.576,104.074,27.038)
OP2: (119.440,103.856,29.591)
C3': (123.991,105.123,28.131)
C1': (124.439,106.982,29.521)
C5': (121.693,106.038,27.390)
O4': (123.260,107.251,28.776)
C8: (122.833,106.385,31.424)
O2': (126.148,106.317,27.977)
C6: (124.840,106.222,34.311)
C5: (124.170,106.331,33.077)
C4: (124.938,106.662,31.975)
P: (119.642,104.697,28.385)
C4': (123.153,106.309,27.677)
C2': (125.153,105.809,28.844)
C2: (126.784,106.760,33.176)
N1: (126.174,106.448,34.326)
N3: (126.265,106.894,31.956)
N6: (124.233,105.910,35.458)
N7: (122.841,106.160,32.715)
N9: (124.070,106.691,30.908)
O5': (121.054,105.426,28.532)
O3': (124.414,104.302,27.038)
OP2: (119.440,103.856,29.591)
C3': (123.991,105.123,28.131)
C1': (124.439,106.982,29.521)
C5': (121.693,106.038,27.390)
O4': (123.260,107.251,28.776)
C8: (122.833,106.385,31.424)
O2': (126.148,106.317,27.977)
C6: (124.840,106.222,34.311)
C5: (124.170,106.331,33.077)
C4: (124.938,106.662,31.975)
P: (119.642,104.697,28.385)
C4': (123.153,106.309,27.677)
C2': (125.153,105.809,28.844)
C2: (126.784,106.760,33.176)
N1: (126.174,106.448,34.326)
N3: (126.265,106.894,31.956)
N6: (124.233,105.910,35.458)
N7: (122.841,106.160,32.715)
N9: (124.070,106.691,30.908)
O5': (121.054,105.426,28.532)
O3': (124.414,104.302,27.038)
C2: (120.062,112.340,28.990)
OP1: (125.589,117.484,27.889)
OP2: (124.204,117.820,30.019)
C4: (121.756,110.833,28.457)
O5': (123.304,116.506,28.075)
C3': (120.745,116.976,29.726)
C1': (120.492,114.779,28.998)
O4': (120.744,115.542,27.834)
C5': (122.265,117.432,27.699)
P: (124.610,116.964,28.870)
O2: (118.886,112.591,29.319)
C4': (120.924,116.941,28.209)
C2': (121.139,115.565,30.130)
O2': (120.591,115.198,31.370)
N1: (120.968,113.402,28.799)
N3: (120.490,111.068,28.810)
N4: (122.136,109.562,28.299)
C6: (122.260,113.147,28.434)
C5: (122.692,111.891,28.253)
O3': (119.358,117.117,30.003)
OP1: (125.589,117.484,27.889)
OP2: (124.204,117.820,30.019)
C4: (121.756,110.833,28.457)
O5': (123.304,116.506,28.075)
C3': (120.745,116.976,29.726)
C1': (120.492,114.779,28.998)
O4': (120.744,115.542,27.834)
C5': (122.265,117.432,27.699)
P: (124.610,116.964,28.870)
O2: (118.886,112.591,29.319)
C4': (120.924,116.941,28.209)
C2': (121.139,115.565,30.130)
O2': (120.591,115.198,31.370)
N1: (120.968,113.402,28.799)
N3: (120.490,111.068,28.810)
N4: (122.136,109.562,28.299)
C6: (122.260,113.147,28.434)
C5: (122.692,111.891,28.253)
O3': (119.358,117.117,30.003)
Image (generated by PyMOL):