ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02081:02089

Extra

PDB:
ATOM 1 O3' G A2080 118.141 105.799 27.987 1.00 81.97 O
ATOM 2 P A A2081 119.105 104.508 28.022 1.00 82.17 P
ATOM 3 OP1 A A2081 118.837 103.758 26.768 1.00 82.86 O
ATOM 4 OP2 A A2081 118.960 103.823 29.325 1.00 81.95 O
ATOM 5 O5' A A2081 120.579 105.111 27.955 1.00 83.50 O
ATOM 6 C5' A A2081 121.148 105.546 26.702 1.00 87.13 C
ATOM 7 C4' A A2081 122.604 105.907 26.884 1.00 89.82 C
ATOM 8 O4' A A2081 122.704 106.953 27.886 1.00 90.93 O
ATOM 9 C3' A A2081 123.507 104.805 27.414 1.00 91.44 C
ATOM 10 O3' A A2081 123.940 103.917 26.382 1.00 92.38 O
ATOM 11 C2' A A2081 124.646 105.603 28.037 1.00 92.16 C
ATOM 12 O2' A A2081 125.571 106.105 27.096 1.00 92.76 O
ATOM 13 C1' A A2081 123.882 106.776 28.653 1.00 92.47 C
ATOM 14 N9 A A2081 123.489 106.506 30.035 1.00 94.07 N
ATOM 15 C8 A A2081 122.239 106.189 30.511 1.00 94.97 C
ATOM 16 N7 A A2081 122.207 105.955 31.800 1.00 95.93 N
ATOM 17 C5 A A2081 123.522 106.137 32.205 1.00 96.01 C
ATOM 18 C6 A A2081 124.148 106.021 33.458 1.00 96.35 C
ATOM 19 N6 A A2081 123.503 105.673 34.574 1.00 95.72 N
ATOM 20 N1 A A2081 125.477 106.272 33.524 1.00 97.07 N
ATOM 21 C2 A A2081 126.122 106.611 32.397 1.00 96.63 C
ATOM 22 N3 A A2081 125.644 106.748 31.160 1.00 96.10 N
ATOM 23 C4 A A2081 124.321 106.492 31.132 1.00 95.69 C
ATOM 24 P G A2082 124.388 102.411 26.752 1.00 93.40 P
ATOM 25 OP1 G A2082 124.744 101.754 25.477 1.00 93.57 O
ATOM 26 OP2 G A2082 123.369 101.786 27.626 1.00 94.09 O
ATOM 27 O5' G A2082 125.712 102.603 27.618 1.00 93.89 O
TER

ATOM 1 O3' U B2088 124.869 115.285 28.972 1.00 72.43 O
ATOM 2 P C B2089 124.294 116.701 28.479 1.00 71.93 P
ATOM 3 OP1 C B2089 125.138 117.184 27.367 1.00 73.75 O
ATOM 4 OP2 C B2089 124.075 117.576 29.655 1.00 72.36 O
ATOM 5 O5' C B2089 122.888 116.274 27.863 1.00 72.30 O
ATOM 6 C5' C B2089 121.868 117.235 27.540 1.00 70.52 C
ATOM 7 C4' C B2089 120.535 116.757 28.071 1.00 69.40 C
ATOM 8 O4' C B2089 120.326 115.379 27.641 1.00 67.89 O
ATOM 9 C3' C B2089 120.426 116.728 29.596 1.00 68.40 C
ATOM 10 O3' C B2089 119.066 116.876 29.968 1.00 67.77 O
ATOM 11 C2' C B2089 120.818 115.297 29.918 1.00 67.73 C
ATOM 12 O2' C B2089 120.324 114.864 31.160 1.00 67.28 O
ATOM 13 C1' C B2089 120.124 114.565 28.777 1.00 68.99 C
ATOM 14 N1 C B2089 120.629 113.213 28.509 1.00 70.78 N
ATOM 15 C2 C B2089 119.762 112.116 28.688 1.00 72.57 C
ATOM 16 O2 C B2089 118.581 112.318 29.037 1.00 72.06 O
ATOM 17 N3 C B2089 120.232 110.868 28.474 1.00 73.38 N
ATOM 18 C4 C B2089 121.500 110.689 28.094 1.00 73.53 C
ATOM 19 N4 C B2089 121.926 109.440 27.911 1.00 74.08 N
ATOM 20 C5 C B2089 122.390 111.783 27.888 1.00 73.61 C
ATOM 21 C6 C B2089 121.918 113.014 28.104 1.00 72.15 C
ATOM 22 P A B2090 118.465 118.330 30.247 1.00 68.55 P
ATOM 23 OP1 A B2090 118.576 119.103 28.982 1.00 67.75 O
ATOM 24 OP2 A B2090 119.085 118.854 31.494 1.00 68.26 O
ATOM 25 O5' A B2090 116.919 118.041 30.513 1.00 67.67 O
TER

Atoms:
OP1: (118.837,103.758,26.768)
OP2: (118.960,103.823,29.325)
C3': (123.507,104.805,27.414)
C1': (123.882,106.776,28.653)
C5': (121.148,105.546,26.702)
O4': (122.704,106.953,27.886)
C8: (122.239,106.189,30.511)
O2': (125.571,106.105,27.096)
C6: (124.148,106.021,33.458)
C5: (123.522,106.137,32.205)
C4: (124.321,106.492,31.132)
P: (119.105,104.508,28.022)
C4': (122.604,105.907,26.884)
C2': (124.646,105.603,28.037)
C2: (126.122,106.611,32.397)
N1: (125.477,106.272,33.524)
N3: (125.644,106.748,31.160)
N6: (123.503,105.673,34.574)
N7: (122.207,105.955,31.800)
N9: (123.489,106.506,30.035)
O5': (120.579,105.111,27.955)
O3': (123.940,103.917,26.382)
C2: (119.762,112.116,28.688)
OP1: (125.138,117.184,27.367)
OP2: (124.075,117.576,29.655)
C4: (121.500,110.689,28.094)
O5': (122.888,116.274,27.863)
C3': (120.426,116.728,29.596)
C1': (120.124,114.565,28.777)
O4': (120.326,115.379,27.641)
C5': (121.868,117.235,27.540)
P: (124.294,116.701,28.479)
O2: (118.581,112.318,29.037)
C4': (120.535,116.757,28.071)
C2': (120.818,115.297,29.918)
O2': (120.324,114.864,31.160)
N1: (120.629,113.213,28.509)
N3: (120.232,110.868,28.474)
N4: (121.926,109.440,27.911)
C6: (121.918,113.014,28.104)
C5: (122.390,111.783,27.888)
O3': (119.066,116.876,29.968)
Image (generated by PyMOL):
PyMOL image
show in jmol